2N9I
 
 | | Solution structure of reduced human cytochrome c | | Descriptor: | Cytochrome c, HEME C | | Authors: | Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K. | | Deposit date: | 2015-11-24 | | Release date: | 2016-02-17 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c
Biochem.Biophys.Res.Commun., 469, 2016
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2N5J
 | | Regnase-1 N-terminal domain | | Descriptor: | Ribonuclease ZC3H12A | | Authors: | Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F. | | Deposit date: | 2015-07-18 | | Release date: | 2016-03-16 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
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2N5K
 | | Regnase-1 Zinc finger domain | | Descriptor: | Ribonuclease ZC3H12A, ZINC ION | | Authors: | Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F. | | Deposit date: | 2015-07-18 | | Release date: | 2016-03-16 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
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2KBT
 | | Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method | | Descriptor: | Proto-oncogene vav,Immunoglobulin G-binding protein G | | Authors: | Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F. | | Deposit date: | 2008-12-07 | | Release date: | 2009-02-03 | | Last modified: | 2024-04-10 | | Method: | SOLUTION NMR | | Cite: | Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method
J.Biomol.Nmr, 43, 2009
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2KZK
 | | Solution structure of alpha-mannosidase binding domain of Atg34 | | Descriptor: | Uncharacterized protein YOL083W | | Authors: | Watanabe, Y, Noda, N, Kumeta, H, Suzuki, K, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2010-06-18 | | Release date: | 2010-07-21 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Selective transport of alpha-mannosidase by autophagic pathways: structural basis for cargo recognition by Atg19 and Atg34.
J.Biol.Chem., 285, 2010
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2LPU
 | | Solution structures of KmAtg10 | | Descriptor: | KmAtg10 | | Authors: | Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2012-02-19 | | Release date: | 2012-08-01 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
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2N5L
 | | Regnase-1 C-terminal domain | | Descriptor: | Ribonuclease ZC3H12A | | Authors: | Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F. | | Deposit date: | 2015-07-18 | | Release date: | 2016-03-16 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
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2M63
 | | The protease-resistant N-terminal domain of TIR-domain containing adaptor molecule-1, TICAM-1 | | Descriptor: | TIR domain-containing adapter molecule 1 | | Authors: | Kumeta, H, Enokizono, Y, Sakakibara, H, Ogura, K, Matsumoto, M, Seya, T, Inagaki, F. | | Deposit date: | 2013-03-20 | | Release date: | 2014-03-05 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | The N-terminal domain of TIR domain-containing adaptor molecule-1, TICAM-1.
J.Biomol.Nmr, 58, 2014
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2M1W
 | | TICAM-2 TIR domain | | Descriptor: | TIR domain-containing adapter molecule 2 | | Authors: | Enokizono, Y, Kumeta, H, Funami, K, Horiuchi, M, Sarmiento, J, Yamashita, K, Standley, D.M, Matsumoto, M, Seya, T, Inagaki, F. | | Deposit date: | 2012-12-07 | | Release date: | 2014-01-15 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
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2KKC
 | | NMR structure of the p62 PB1 domain | | Descriptor: | Sequestosome-1 | | Authors: | Yokochi, M, Inagaki, F. | | Deposit date: | 2009-06-18 | | Release date: | 2009-09-15 | | Last modified: | 2021-11-10 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the p62 PB1 domain, a key protein in autophagy and NF-kappaB signaling pathway
J.Biomol.Nmr, 45, 2009
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2KTR
 | | NMR structure of p62 PB1 dimer determined based on PCS | | Descriptor: | Sequestosome-1, TERBIUM(III) ION | | Authors: | Saio, T, Yokochi, M, Kumeta, H, Inagaki, F. | | Deposit date: | 2010-02-05 | | Release date: | 2010-04-07 | | Last modified: | 2021-11-10 | | Method: | SOLUTION NMR | | Cite: | PCS-based structure determination of protein-protein complexes
J.Biomol.Nmr, 46, 2010
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2KWC
 | | The NMR structure of the autophagy-related protein Atg8 | | Descriptor: | Autophagy-related protein 8 | | Authors: | Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2010-04-05 | | Release date: | 2010-05-12 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
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2KSV
 | | The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum | | Descriptor: | Protein-glutaminase | | Authors: | Kumeta, H, Miwa, N, Ogura, K, Kai, Y, Mizukoshi, T, Shimba, N, Suzuki, E, Inagaki, F. | | Deposit date: | 2010-01-14 | | Release date: | 2010-02-16 | | Last modified: | 2022-03-16 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum.
J.Biomol.Nmr, 46, 2010
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2KE4
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2KZB
 | | Solution structure of alpha-mannosidase binding domain of Atg19 | | Descriptor: | Autophagy-related protein 19 | | Authors: | Watanabe, Y, Noda, N, Kumeta, H, Suzuki, K, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2010-06-15 | | Release date: | 2010-07-21 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Selective transport of alpha-mannosidase by autophagic pathways: structural basis for cargo recognition by Atg19 and Atg34.
J.Biol.Chem., 285, 2010
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1TH5
 | | Solution structure of C-terminal domain of NifU-like protein from Oryza sativa | | Descriptor: | NifU1 | | Authors: | Kumeta, H, Ogura, K, Asayama, M, Katoh, S, Katoh, E, Inagaki, F. | | Deposit date: | 2004-06-01 | | Release date: | 2005-09-27 | | Last modified: | 2022-03-02 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the domain II of a chloroplastic NifU-like protein OsNifU1A.
J.Biomol.Nmr, 38, 2007
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1UCF
 | | The Crystal Structure of DJ-1, a Protein Related to Male Fertility and Parkinson's Disease | | Descriptor: | RNA-binding protein regulatory subunit | | Authors: | Honbou, K, Suzuki, N.N, Horiuchi, M, Niki, T, Taira, T, Ariga, H, Inagaki, F. | | Deposit date: | 2003-04-11 | | Release date: | 2003-08-19 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | The Crystal Structure of DJ-1, a Protein Related to Male Fertility and Parkinson's Disease
J.BIOL.CHEM., 278, 2003
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1UEC
 | | Crystal structure of autoinhibited form of tandem SH3 domain of p47phox | | Descriptor: | Neutrophil cytosol factor 1 | | Authors: | Yuzawa, S, Suzuki, N.N, Fujioka, Y, Ogura, K, Sumimoto, H, Inagaki, F. | | Deposit date: | 2003-05-11 | | Release date: | 2003-05-27 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.82 Å) | | Cite: | A molecular mechanism for autoinhibition of the tandem SH3 domains of p47phox, the regulatory subunit of the phagocyte NADPH oxidase
Genes Cells, 9, 2004
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1TZ1
 | | Solution structure of the PB1 domain of CDC24P (short form) | | Descriptor: | Cell division control protein 24 | | Authors: | Yoshinaga, S, Terasawa, H, Ogura, K, Noda, Y, Ito, T, Sumimoto, H, Inagaki, F. | | Deposit date: | 2004-07-09 | | Release date: | 2005-09-06 | | Last modified: | 2022-03-02 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the PB1 domain of CDC24P (short form)
To be Published
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2CY7
 | | The crystal structure of human Atg4B | | Descriptor: | Cysteine protease APG4B | | Authors: | Sugawara, K, Suzuki, N.N, Fujioka, Y, Mizushima, N, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2005-07-05 | | Release date: | 2005-09-13 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural Basis for the Specificity and Catalysis of Human Atg4B Responsible for Mammalian Autophagy
J.Biol.Chem., 280, 2005
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2CJN
 | | STRUCTURE OF FERREDOXIN, NMR, MINIMIZED AVERAGE STRUCTURE | | Descriptor: | FERREDOXIN | | Authors: | Hatanaka, H, Tanimura, R, Katoh, S, Inagaki, F. | | Deposit date: | 1997-02-06 | | Release date: | 1997-05-15 | | Last modified: | 2022-03-09 | | Method: | SOLUTION NMR | | Cite: | Solution structure of ferredoxin from the thermophilic cyanobacterium Synechococcus elongatus and its thermostability.
J.Mol.Biol., 268, 1997
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2CJO
 | | STRUCTURE OF FERREDOXIN, NMR, 10 STRUCTURES | | Descriptor: | FERREDOXIN | | Authors: | Hatanaka, H, Tanimura, R, Katoh, S, Inagaki, F. | | Deposit date: | 1997-02-06 | | Release date: | 1997-05-15 | | Last modified: | 2022-03-09 | | Method: | SOLUTION NMR | | Cite: | Solution structure of ferredoxin from the thermophilic cyanobacterium Synechococcus elongatus and its thermostability.
J.Mol.Biol., 268, 1997
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2CZO
 | | Solution Structure of the PX Domain of Bem1p | | Descriptor: | Bud emergence protein 1 | | Authors: | Maeda, A, Ogura, K, Horiuchi, M, Kumeta, H, Fujioka, Y, Inagaki, F. | | Deposit date: | 2005-07-14 | | Release date: | 2006-10-03 | | Last modified: | 2022-03-09 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the PX domain of Bem1p
To be Published
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2D5R
 | | Crystal Structure of a Tob-hCaf1 Complex | | Descriptor: | CCR4-NOT transcription complex subunit 7, Tob1 protein | | Authors: | Horiuchi, M, Suzuki, N.N, Muroya, N, Takahasi, K, Nishida, M, Yoshida, Y, Ikematsu, N, Nakamura, T, Kawamura-Tsuzuku, J, Yamamoto, T, Inagaki, F. | | Deposit date: | 2005-11-04 | | Release date: | 2006-12-12 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structural basis for the antiproliferative activity of the Tob-hCaf1 complex.
J.Biol.Chem., 284, 2009
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2DVJ
 | | phosphorylated Crk-II | | Descriptor: | V-crk sarcoma virus CT10 oncogene homolog, isoform a | | Authors: | Kobashigawa, Y, Inagaki, F. | | Deposit date: | 2006-07-31 | | Release date: | 2007-05-08 | | Last modified: | 2022-03-09 | | Method: | SOLUTION NMR | | Cite: | Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
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