1K1G
| STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1 | Descriptor: | 5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3', SF1-Bo isoform | Authors: | Liu, Z, Luyten, I, Bottomley, M.J, Messias, A.C, Houngninou-Molango, S, Sprangers, R, Zanier, K, Kramer, A, Sattler, M. | Deposit date: | 2001-09-25 | Release date: | 2001-11-07 | Last modified: | 2022-02-23 | Method: | SOLUTION NMR | Cite: | Structural basis for recognition of the intron branch site RNA by splicing factor 1. Science, 294, 2001
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5AIP
| Crystal structure of NadR in complex with 4-hydroxyphenylacetate | Descriptor: | 4-HYDROXYPHENYLACETATE, TRANSCRIPTIONAL REGULATOR, MARR FAMILY | Authors: | Liguori, A, Malito, E, Bottomley, M.J. | Deposit date: | 2015-02-16 | Release date: | 2016-03-02 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Molecular Basis of Ligand-Dependent Regulation of Nadr, the Transcriptional Repressor of Meningococcal Virulence Factor Nada. Plos Pathog., 12, 2016
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3P5B
| The structure of the LDLR/PCSK9 complex reveals the receptor in an extended conformation | Descriptor: | CALCIUM ION, Low density lipoprotein receptor variant, Proprotein convertase subtilisin/kexin type 9 | Authors: | Lo Surdo, P, Bottomley, M.J, Calzetta, A, Settembre, E.C, Cirillo, A, Pandit, S, Ni, Y, Hubbard, B, Sitlani, A, Carfi, A. | Deposit date: | 2010-10-08 | Release date: | 2011-10-26 | Last modified: | 2017-11-08 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Mechanistic implications for LDL receptor degradation from the PCSK9/LDLR structure at neutral pH. Embo Rep., 12, 2011
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3P5C
| The structure of the LDLR/PCSK9 complex reveals the receptor in an extended conformation | Descriptor: | CALCIUM ION, Low density lipoprotein receptor variant, Proprotein convertase subtilisin/kexin type 9 | Authors: | Lo Surdo, P, Bottomley, M.J, Calzetta, A, Settembre, E.C, Cirillo, A, Pandit, S, Ni, Y, Hubbard, B, Sitlani, A, Carfi, A. | Deposit date: | 2010-10-08 | Release date: | 2011-10-26 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (4.2 Å) | Cite: | Mechanistic implications for LDL receptor degradation from the PCSK9/LDLR structure at neutral pH. Embo Rep., 12, 2011
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4BIG
| Crystal structure of the conserved staphylococcal antigen 1B, Csa1B | Descriptor: | UNCHARACTERIZED LIPOPROTEIN SAOUHSC_00053 | Authors: | Malito, E, Bottomley, M.J, Schluepen, C, Liberatori, S. | Deposit date: | 2013-04-10 | Release date: | 2013-08-07 | Last modified: | 2013-10-30 | Method: | X-RAY DIFFRACTION (2.274 Å) | Cite: | Mining the Bacterial Unknown Proteome: Identification and Characterization of a Novel Family of Highly Conserved Protective Antigens in Staphylococcus Aureus Biochem.J., 455, 2013
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4B8Y
| Ferrichrome-bound FhuD2 | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ... | Authors: | Malito, E, Bottomley, M.J, Spraggon, G. | Deposit date: | 2012-08-31 | Release date: | 2012-11-21 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Functional Characterization of the Staphylococcus Aureus Virulence Factor and Vaccine Candidate Fhud2. Biochem.J., 449, 2013
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4BIH
| Crystal structure of the conserved staphylococcal antigen 1A, Csa1A | Descriptor: | CALCIUM ION, UNCHARACTERIZED LIPOPROTEIN SAOUHSC_00053 | Authors: | Malito, E, Bottomley, M.J, Spraggon, G, Schluepen, C, Liberatori, S. | Deposit date: | 2013-04-10 | Release date: | 2013-08-07 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.459 Å) | Cite: | Mining the Bacterial Unknown Proteome: Identification and Characterization of a Novel Family of Highly Conserved Protective Antigens in Staphylococcus Aureus Biochem.J., 455, 2013
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4CJD
| Crystal structure of Neisseria meningitidis trimeric autotransporter and vaccine antigen NadA | Descriptor: | IODIDE ION, NADA | Authors: | Malito, E, Biancucci, M, Spraggon, G, Bottomley, M.J. | Deposit date: | 2013-12-19 | Release date: | 2014-11-26 | Last modified: | 2014-12-17 | Method: | X-RAY DIFFRACTION (2.056 Å) | Cite: | Structure of the Meningococcal Vaccine Antigen Nada and Epitope Mapping of a Bactericidal Antibody. Proc.Natl.Acad.Sci.USA, 111, 2014
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4DMW
| Crystal structure of the GT domain of Clostridium difficile toxin A (TcdA) in complex with UDP and Manganese | Descriptor: | MANGANESE (II) ION, Toxin A, URIDINE-5'-DIPHOSPHATE | Authors: | Malito, E, D'Urzo, N, Bottomley, M.J, Biancucci, M, Scarselli, M, Maione, D, Martinelli, M. | Deposit date: | 2012-02-08 | Release date: | 2012-07-18 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The structure of Clostridium difficile toxin A glucosyltransferase domain bound to Mn2+ and UDP provides insights into glucosyltransferase activity and product release. Febs J., 279, 2012
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4DMV
| Crystal structure of the GT domain of Clostridium difficile Toxin A | Descriptor: | Toxin A | Authors: | Malito, E, D'Urzo, N, Bottomley, M.J, Biancucci, M, Maione, D, Scarselli, M, Martinelli, M. | Deposit date: | 2012-02-08 | Release date: | 2012-07-18 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The structure of Clostridium difficile toxin A glucosyltransferase domain bound to Mn2+ and UDP provides insights into glucosyltransferase activity and product release. Febs J., 279, 2012
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2Y7S
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2YPV
| Crystal structure of the Meningococcal vaccine antigen factor H binding protein in complex with a bactericidal antibody | Descriptor: | 1,2-ETHANEDIOL, FAB 12C1, LIPOPROTEIN | Authors: | Malito, E, Veggi, D, Bottomley, M.J. | Deposit date: | 2012-11-01 | Release date: | 2013-02-20 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Defining a Protective Epitope on Factor H Binding Protein, a Key Meningococcal Virulence Factor and Vaccine Antigen. Proc.Natl.Acad.Sci.USA, 110, 2013
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4OXR
| Structure of Staphylococcus pseudintermedius metal-binding protein SitA in complex with Manganese | Descriptor: | MANGANESE (II) ION, Manganese ABC transporter, periplasmic-binding protein SitA | Authors: | Abate, F, Malito, E, Bottomley, M. | Deposit date: | 2014-02-06 | Release date: | 2014-10-29 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Apo, Zn2+-bound and Mn2+-bound structures reveal ligand-binding properties of SitA from the pathogen Staphylococcus pseudintermedius. Biosci.Rep., 34, 2014
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4OXQ
| Structure of Staphylococcus pseudintermedius metal-binding protein SitA in complex with Zinc | Descriptor: | Manganese ABC transporter, periplasmic-binding protein SitA, ZINC ION | Authors: | Abate, F, Malito, E, Bottomley, M. | Deposit date: | 2014-02-06 | Release date: | 2014-10-29 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.62 Å) | Cite: | Apo, Zn2+-bound and Mn2+-bound structures reveal ligand-binding properties of SitA from the pathogen Staphylococcus pseudintermedius. Biosci.Rep., 34, 2014
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6XZW
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6CUJ
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2JW6
| Solution structure of the DEAF1 MYND domain | Descriptor: | Deformed epidermal autoregulatory factor 1 homolog, ZINC ION | Authors: | Spadaccini, R, Perrin, H, Bottomley, M, Ansieu, S, Sattler, M. | Deposit date: | 2007-10-08 | Release date: | 2007-12-25 | Last modified: | 2013-04-10 | Method: | SOLUTION NMR | Cite: | Retraction notice to "Structure and functional analysis of the MYND domain" [J. Mol. Biol. (2006) 358, 498-508]. J.Mol.Biol., 376, 2008
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5N4G
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5N4J
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7MMN
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7MPG
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5T5F
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5UR8
| Human antibody fragment (Fab) to meningococcal Factor H binding protein | Descriptor: | human immunoglobulin gamma, heavy chain Fd fragment, kappa light chain | Authors: | Beernink, P.T. | Deposit date: | 2017-02-09 | Release date: | 2018-02-14 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.75500226 Å) | Cite: | Crystal structure reveals vaccine elicited bactericidal human antibody targeting a conserved epitope on meningococcal fHbp. Nat Commun, 9, 2018
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8EPN
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8EPQ
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