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5G05
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BU of 5g05 by Molmil
Cryo-EM structure of combined apo phosphorylated APC
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
Authors:Zhang, S, Chang, L, Alfieri, C, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D.
Deposit date:2016-03-16
Release date:2016-05-25
Last modified:2019-09-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular Mechanism of Apc/C Activation by Mitotic Phosphorylation.
Nature, 533, 2016
6F0X
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BU of 6f0x by Molmil
Cryo-EM structure of TRIP13 in complex with ATP gamma S, p31comet, C-Mad2 and Cdc20
Descriptor: Cell division cycle protein 20 homolog, MAD2L1-binding protein, Mitotic spindle assembly checkpoint protein MAD2A, ...
Authors:Alfieri, C, Chang, L, Barford, D.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Mechanism for remodelling of the cell cycle checkpoint protein MAD2 by the ATPase TRIP13.
Nature, 559, 2018
7B1H
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BU of 7b1h by Molmil
Monoclinic P21 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Descriptor: Mitotic checkpoint serine/threonine-protein kinase BUB1, Mitotic spindle assembly checkpoint protein MAD1
Authors:Fischer, E, Bellini, D, Barford, D.
Deposit date:2020-11-24
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular mechanism of Mad1 kinetochore targeting by phosphorylated Bub1.
Embo Rep., 22, 2021
7B1F
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BU of 7b1f by Molmil
Orthorhombic P212121 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Descriptor: Mitotic checkpoint serine/threonine-protein kinase BUB1, Mitotic spindle assembly checkpoint protein MAD1
Authors:Fischer, E, Bellini, D, Barford, D.
Deposit date:2020-11-24
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular mechanism of Mad1 kinetochore targeting by phosphorylated Bub1.
Embo Rep., 22, 2021
7B1J
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BU of 7b1j by Molmil
Orthorhombic P21212 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Descriptor: Mitotic checkpoint serine/threonine-protein kinase BUB1, Mitotic spindle assembly checkpoint protein MAD1
Authors:Fischer, E, Bellini, D, Barford, D.
Deposit date:2020-11-25
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular mechanism of Mad1 kinetochore targeting by phosphorylated Bub1.
Embo Rep., 22, 2021
2XPI
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BU of 2xpi by Molmil
Crystal structure of APC/C hetero-tetramer Cut9-Hcn1
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT CUT9, ANAPHASE-PROMOTING COMPLEX SUBUNIT HCN1 HCN1/CDC26,20S CYCLOSOME/APC COMPLEX PROTEIN HCN1, CHAPERONE-LIKE PROTEIN HCN1, ...
Authors:Zhang, Z, Kulkarni, K.A, Barford, D.
Deposit date:2010-08-26
Release date:2011-03-30
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Apc/C Subunit Cdc16/Cut9 is a Contiguous Tetratricopeptide Superhelix with a Homo-Dimer Interface Similar to Cdc27
Embo J., 29, 2010
2Y4I
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BU of 2y4i by Molmil
KSR2-MEK1 heterodimer
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1, ...
Authors:Brennan, D.F, Barford, D.
Deposit date:2011-01-06
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:A Raf-Induced Allosteric Transition of Ksr Stimulates Ksr and Raf Phosphorylation of Mek
Nature, 472, 2011
8QV0
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BU of 8qv0 by Molmil
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Descriptor: Tubulin alpha-1 chain, Tubulin beta chain
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 31, 2024
8QV3
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BU of 8qv3 by Molmil
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Spindle pole body component, Spindle pole body component 110, ...
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 31, 2024
8QV2
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BU of 8qv2 by Molmil
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Spindle pole body component, ...
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (9.2 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 31, 2024
2BGG
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BU of 2bgg by Molmil
The structure of a Piwi protein from Archaeoglobus fulgidus complexed with a 16nt siRNA duplex.
Descriptor: 5'-R(*GP*UP*CP*GP*AP*AP*UP*UP)-3', 5'-R(*UP*UP*CP*GP*AP*CP*GP*CP)-3', MANGANESE (II) ION, ...
Authors:Parker, J.S, Roe, S.M, Barford, D.
Deposit date:2004-12-22
Release date:2005-03-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights Into Mrna Recognition from a Piwi Domain-Sirna Guide Complex
Nature, 434, 2005
2YIN
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BU of 2yin by Molmil
STRUCTURE OF THE COMPLEX BETWEEN Dock2 AND Rac1.
Descriptor: DEDICATOR OF CYTOKINESIS PROTEIN 2, RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1
Authors:Kulkarni, K.A, Yang, J, Zhang, Z, Barford, D.
Deposit date:2011-05-16
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Multiple Factors Confer Specific Cdc42 and Rac Protein Activation by Dedicator of Cytokinesis (Dock) Nucleotide Exchange Factors.
J.Biol.Chem., 286, 2011
1H6G
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BU of 1h6g by Molmil
alpha-catenin M-domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ALPHA-1 CATENIN, CALCIUM ION, ...
Authors:Yang, J, Dokurno, P, Tonks, N.K, Barford, D.
Deposit date:2001-06-14
Release date:2001-08-07
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the M-Fragment of Alpha-Catenin: Implications for Modulation of Cell Adhesion.
Embo J., 20, 2001
7YYH
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BU of 7yyh by Molmil
Structure of the human CCANdeltaT CENP-A alpha-satellite complex
Descriptor: Centromere protein C, Centromere protein H, Centromere protein I, ...
Authors:Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
Deposit date:2022-02-17
Release date:2022-05-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
7YWX
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BU of 7ywx by Molmil
Structure of the human CCAN CENP-A alpha-satellite complex
Descriptor: Centromere protein C, Centromere protein H, Centromere protein I, ...
Authors:Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
Deposit date:2022-02-14
Release date:2022-05-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
5FTP
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BU of 5ftp by Molmil
sulfur SAD phasing of Cdc23Nterm: data collection with a tailored X- ray beam size at 2.69 A wavelength (4.6 keV)
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 8
Authors:Cianci, M, Groves, M.R, Barford, D, Schneider, T.R.
Deposit date:2016-01-14
Release date:2016-03-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Data Collection with a Tailored X-Ray Beam Size at 2.69 A Wavelength (4.6 Kev): Sulfur Sad Phasing of Cdc23Nterm
Acta Crystallogr.,Sect.D, 72, 2016
8QRY
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BU of 8qry by Molmil
Crystal structure of the yeast spindle body component Spc98
Descriptor: Spindle pole body component
Authors:Bellini, D, Yatskevich, S, Barford, D.
Deposit date:2023-10-09
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of the yeast spindle body component Spc98
To Be Published
7PB8
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BU of 7pb8 by Molmil
Crystal structure of the CENP-OPQUR complex
Descriptor: Centromere protein O, Centromere protein P, Centromere protein Q, ...
Authors:Bellini, D, Yatskevich, S, Muir, K.W, Barford, D.
Deposit date:2021-07-31
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.68 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
7PB4
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BU of 7pb4 by Molmil
Cenp-HIK 3-protein complex
Descriptor: Centromere protein H, Centromere protein I, Centromere protein K
Authors:Bellini, D, Yatskevich, S, Muir, W.K, Barford, D.
Deposit date:2021-07-30
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
4UI9
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BU of 4ui9 by Molmil
Atomic structure of the human Anaphase-Promoting Complex
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
Authors:Chang, L, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D.
Deposit date:2015-03-27
Release date:2015-06-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Atomic Structure of the Apc and its Mechanism of Protein Ubiquitination
Nature, 522, 2015
3BO6
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BU of 3bo6 by Molmil
Structure of the Chromobacterium violaceum VirA (SpvC) Phosphothreonine Lyase effector protein
Descriptor: Hydrophilic protein, virA protein, SULFATE ION
Authors:Brennan, D.F, Roe, S.M, Barford, D.
Deposit date:2007-12-17
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and Mechanism of the Chromobacterium violaceum VirA Phosphothreonine Lyase Type III Secretion System Effector
To be Published
6YPC
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BU of 6ypc by Molmil
Crystal structure of the kinetochore subunits H/I/K/T/W penta-complex from S. cerevisiae at 2.9 angstroms
Descriptor: Inner kinetochore subunit CNN1, Inner kinetochore subunit CTF3, Inner kinetochore subunit MCM16, ...
Authors:Bellini, D, Zhang, Z, Barford, D.
Deposit date:2020-04-15
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the Cenp-HIKHead-TW sub-module of the inner kinetochore CCAN complex.
Nucleic Acids Res., 48, 2020
7AAP
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BU of 7aap by Molmil
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP
Descriptor: MAGNESIUM ION, Non-structural protein 12, Non-structural protein 7, ...
Authors:Naydenova, K, Muir, K.W, Wu, L.F, Zhang, Z, Coscia, F, Peet, M, Castro-Hartman, P, Qian, P, Sader, K, Dent, K, Kimanius, D, Sutherland, J.D, Lowe, J, Barford, D, Russo, C.J.
Deposit date:2020-09-04
Release date:2020-09-23
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structure of the SARS-CoV-2 RNA-dependent RNA polymerase in the presence of favipiravir-RTP.
Proc.Natl.Acad.Sci.USA, 118, 2021
8QAU
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BU of 8qau by Molmil
Outer kinetochore Ndc80-Dam1 alpha/beta-tubulin complex
Descriptor: DASH complex subunit DAM1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Muir, K.W, Barford, D.
Deposit date:2023-08-23
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Mechanism of outer kinetochore assembly on microtubules and its regulation by mitotic error correction
Biorxiv, 2023
5MZ6
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BU of 5mz6 by Molmil
Cryo-EM structure of a Separase-Securin complex from Caenorhabditis elegans at 3.8 A resolution
Descriptor: Interactor of FizzY protein, SEParase
Authors:Boland, A, Martin, T.G, Zhang, Z, Yang, J, Bai, X.C, Chang, L, Scheres, S.H.W, Barford, D.
Deposit date:2017-01-31
Release date:2017-03-08
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of a metazoan separase-securin complex at near-atomic resolution.
Nat. Struct. Mol. Biol., 24, 2017

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PDB entries from 2024-09-18

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