Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7OX7
DownloadVisualize
BU of 7ox7 by Molmil
Target-bound SpCas9 complex with TRAC chimeric RNA-DNA guide
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Donohoue, P, Pacesa, M, Lau, E, Vidal, B, Irby, M.J, Nyer, D.B, Rotstein, T, Banh, L, Toh, M.T, Gibson, J, Kohrs, B, Baek, K, Owen, A.L.G, Slorach, E.M, van Overbeek, M, Fuller, C.K, May, A.P, Jinek, M, Cameron, P.
Deposit date:2021-06-22
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformational control of Cas9 by CRISPR hybrid RNA-DNA guides mitigates off-target activity in T cells.
Mol.Cell, 81, 2021
8DGX
DownloadVisualize
BU of 8dgx by Molmil
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent
Descriptor: Antibody CC68.109 Fab heavy chain, Antibody CC68.109 Fab light chain, Spike protein S2'
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-06-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Immunity, 56, 2023
8DGU
DownloadVisualize
BU of 8dgu by Molmil
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent
Descriptor: Antibody CC25.106 Fab heavy chain, Antibody CC25.106 Fab light chain, GLYCEROL, ...
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-06-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Immunity, 56, 2023
8DGV
DownloadVisualize
BU of 8dgv by Molmil
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent
Descriptor: Antibody CC99.103 Fab heavy chain, Antibody CC99.103 Fab light chain, Spike protein S2'
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-06-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Immunity, 56, 2023
8DGW
DownloadVisualize
BU of 8dgw by Molmil
Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent
Descriptor: Antibody CC95.108 Fab heavy chain, Antibody CC95.108 Fab light chain, Spike protein S2'
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-06-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Immunity, 56, 2023
5XAF
DownloadVisualize
BU of 5xaf by Molmil
Crystal structure of tubulin-stathmin-TTL-Compound Z1 complex
Descriptor: (3S,4R)-4-(3-hydroxy-4-methoxyphenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Zhang, H, Luo, C, Wang, Y.
Deposit date:2017-03-12
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Design, synthesis, biological evaluation and cocrystal structures with tubulin of chiral beta-lactam bridged combretastatin A-4 analogues as potent antitumor agents
Eur J Med Chem, 144, 2017
5XAG
DownloadVisualize
BU of 5xag by Molmil
Crystal structure of tubulin-stathmin-TTL-Compound Z2 complex
Descriptor: (3~{R},4~{R})-3-(hydroxymethyl)-4-(4-methoxy-3-oxidanyl-phenyl)-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Zhang, H, Luo, C, Wang, Y.
Deposit date:2017-03-12
Release date:2018-01-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Design, synthesis, biological evaluation and cocrystal structures with tubulin of chiral beta-lactam bridged combretastatin A-4 analogues as potent antitumor agents
Eur J Med Chem, 144, 2017
5Z2C
DownloadVisualize
BU of 5z2c by Molmil
Crystal structure of ALPK-1 N-terminal domain in complex with ADP-heptose
Descriptor: Alpha-protein kinase 1, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4S,5S,6R)-6-[(1S)-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Ding, J, She, Y, Shao, F.
Deposit date:2018-01-02
Release date:2018-08-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose.
Nature, 561, 2018
5GON
DownloadVisualize
BU of 5gon by Molmil
Structures of a beta-lactam bridged analogue in complex with tubulin
Descriptor: (3R,4R)-4-(4-methoxy-3-oxidanyl-phenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Zhou, L, Liu, Y, Cheng, L, Wang, Y.
Deposit date:2016-07-28
Release date:2017-03-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Potent Antitumor Activities and Structure Basis of the Chiral beta-Lactam Bridged Analogue of Combretastatin A-4 Binding to Tubulin.
J. Med. Chem., 59, 2016
3LHG
DownloadVisualize
BU of 3lhg by Molmil
Bace1 in complex with the aminohydantoin Compound 4g
Descriptor: (5S)-2-amino-5-(2',5'-difluorobiphenyl-3-yl)-3-methyl-5-pyridin-4-yl-3,5-dihydro-4H-imidazol-4-one, Beta-secretase 1
Authors:Olland, A.M.
Deposit date:2010-01-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pyridinyl aminohydantoins as small molecule BACE1 inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
4QP0
DownloadVisualize
BU of 4qp0 by Molmil
Crystal Structure Analysis of the Endo-1,4-beta-mannanase from Rhizomucor miehei
Descriptor: Endo-beta-mannanase, SULFATE ION
Authors:Zheng, Q.J, Peng, Z, Liu, Y, Yan, Q.J, Chen, Z.Z, Qin, Z.
Deposit date:2014-06-22
Release date:2014-11-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
7YPX
DownloadVisualize
BU of 7ypx by Molmil
Cyanophage Pam3 fiber
Descriptor: Pam3 tail fiber proreins, tail fiber chaperone
Authors:Wei, Z.L, Jiang, Y.L, Zhou, C.Z.
Deposit date:2022-08-04
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural Insights into the Chaperone-Assisted Assembly of a Simplified Tail Fiber of the Myocyanophage Pam3.
Viruses, 14, 2022
6KZ5
DownloadVisualize
BU of 6kz5 by Molmil
Crystal Structure Analysis of the Csn-B-bounded NUR77 Ligand binding Domain
Descriptor: Nuclear receptor subfamily 4 group A member 1, ethyl 2-[2-octanoyl-3,5-bis(oxidanyl)phenyl]ethanoate
Authors:Hong, W, Chen, H, Wu, Q, Lin, T.
Deposit date:2019-09-23
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.45 Å)
Cite:Blocking PPAR gamma interaction facilitates Nur77 interdiction of fatty acid uptake and suppresses breast cancer progression.
Proc.Natl.Acad.Sci.USA, 117, 2020
8IQF
DownloadVisualize
BU of 8iqf by Molmil
Cryo-EM structure of the dimeric human CAF1-H3-H4 complex
Descriptor: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
Authors:Liu, C.P, Yu, Z.Y, Xu, R.M.
Deposit date:2023-03-16
Release date:2023-08-16
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
8TS6
DownloadVisualize
BU of 8ts6 by Molmil
Cyanophage A-1(L) portal
Descriptor: Portal protein
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8TUG
DownloadVisualize
BU of 8tug by Molmil
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (engaged state)
Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-16
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WXB
DownloadVisualize
BU of 8wxb by Molmil
Cryo-EM structure of the alpha-carboxysome shell vertex from Prochlorococcus MED4
Descriptor: Carboxysome assembly protein CsoS2, Carboxysome shell vertex protein CsoS4A, Major carboxysome shell protein CsoS1
Authors:Jiang, Y.L, Zhou, R.Q, Zhou, C.Z, Zeng, Q.L.
Deposit date:2023-10-28
Release date:2024-01-31
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure and assembly of the alpha-carboxysome in the marine cyanobacterium Prochlorococcus.
Nat.Plants, 10, 2024
8WPZ
DownloadVisualize
BU of 8wpz by Molmil
Cryo-ET structure of RuBisCO at 3.9 angstroms from Synechococcus elongatus PCC 7942
Descriptor: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit
Authors:Kong, W.W, Jiang, Y.L, Zhou, C.Z.
Deposit date:2023-10-10
Release date:2024-05-15
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-electron tomography reveals the packaging pattern of RuBisCOs in Synechococcus beta-carboxysome.
Structure, 32, 2024
8TVP
DownloadVisualize
BU of 8tvp by Molmil
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (open state)
Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVV
DownloadVisualize
BU of 8tvv by Molmil
Cryo-EM structure of backtracked Pol II
Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVY
DownloadVisualize
BU of 8tvy by Molmil
Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state)
Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVQ
DownloadVisualize
BU of 8tvq by Molmil
Cryo-EM structure of CPD stalled 10-subunit Pol II in complex with Rad26
Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVX
DownloadVisualize
BU of 8tvx by Molmil
Cryo-EM structure of CPD-stalled Pol II (Conformation 2)
Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVW
DownloadVisualize
BU of 8tvw by Molmil
Cryo-EM structure of CPD-stalled Pol II (conformation 1)
Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TVS
DownloadVisualize
BU of 8tvs by Molmil
Cryo-EM structure of backtracked Pol II in complex with Rad26
Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
Authors:Sarsam, R.D, Lahiri, I, Leschziner, A.E.
Deposit date:2023-08-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon