Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5VOV
DownloadVisualize
BU of 5vov by Molmil
Structure of AMPA receptor-TARP complex
Descriptor: Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
Authors:Zhao, Y, Chen, S, Wang, Y.S, Shekhar, M, Tajkhorshid, E, Gouaux, E.
Deposit date:2017-05-03
Release date:2017-07-12
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Activation and Desensitization Mechanism of AMPA Receptor-TARP Complex by Cryo-EM.
Cell, 170, 2017
7EKN
DownloadVisualize
BU of 7ekn by Molmil
Crystal structure of AF10-ipep complex
Descriptor: Protein AF-10, ipep
Authors:Chen, S, Zhou, Z.
Deposit date:2021-04-05
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural characteristics of coiled-coil regions in AF10-DOT1L and AF10-inhibitory peptide complex.
J Leukoc Biol, 110, 2021
7EDP
DownloadVisualize
BU of 7edp by Molmil
Crystal structure of AF10-DOT1L complex
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10
Authors:Chen, S, Zhou, Z.
Deposit date:2021-03-16
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characteristics of coiled-coil regions in AF10-DOT1L and AF10-inhibitory peptide complex.
J Leukoc Biol, 110, 2021
2VPL
DownloadVisualize
BU of 2vpl by Molmil
The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii
Descriptor: 50S RIBOSOMAL PROTEIN L1, FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE, POTASSIUM ION
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Garber, M.
Deposit date:2008-03-01
Release date:2008-09-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Domain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA.
J. Mol. Biol., 383, 2008
5OCL
DownloadVisualize
BU of 5ocl by Molmil
Nanobody-anti-VGLUT nanobody complex
Descriptor: anti-llama nanobody, anti-vglut nanobody
Authors:Dutzler, R, Schenck, S, Kunz, L.
Deposit date:2017-07-03
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Generation and Characterization of Anti-VGLUT Nanobodies Acting as Inhibitors of Transport.
Biochemistry, 56, 2017
6ZX9
DownloadVisualize
BU of 6zx9 by Molmil
Crystal structure of SIV Vpr,fused to T4 lysozyme, isolated from moustached monkey, bound to human DDB1 and human DCAF1 (amino acid residues 1046-1396)
Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, GLYCEROL, ...
Authors:Schwefel, D, Banchenko, S.
Deposit date:2020-07-29
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.519729 Å)
Cite:Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses.
Plos Pathog., 17, 2021
8TKU
DownloadVisualize
BU of 8tku by Molmil
ZIG-4-INS-6 complex, primitive monoclinic form
Descriptor: Probable insulin-like peptide beta-type 5, Zwei Ig domain protein zig-4
Authors:Cheng, S, Baltrusaitis, E, Aziz, Z, Nawrocka, W.I, Ozkan, E.
Deposit date:2023-07-25
Release date:2024-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Nematode Extracellular Protein Interactome Expands Connections between Signaling Pathways.
Biorxiv, 2024
8TK9
DownloadVisualize
BU of 8tk9 by Molmil
ZIG-4-INS-6 complex, tetragonal form
Descriptor: GLYCEROL, Probable insulin-like peptide beta-type 5, SULFATE ION, ...
Authors:Cheng, S, Baltrusaitis, E, Aziz, Z, Nawrocka, W.I, Ozkan, E.
Deposit date:2023-07-25
Release date:2024-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Nematode Extracellular Protein Interactome Expands Connections between Signaling Pathways.
Biorxiv, 2024
8TKT
DownloadVisualize
BU of 8tkt by Molmil
ZIG-4-INS-6 complex, C-centered monoclinic form
Descriptor: Probable insulin-like peptide beta-type 5, Zwei Ig domain protein zig-4
Authors:Cheng, S, Baltrusaitis, E, Aziz, Z, Nawrocka, W.I, Ozkan, E.
Deposit date:2023-07-25
Release date:2024-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nematode Extracellular Protein Interactome Expands Connections between Signaling Pathways.
Biorxiv, 2024
3SFZ
DownloadVisualize
BU of 3sfz by Molmil
Crystal structure of full-length murine Apaf-1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Apoptotic peptidase activating factor 1, GAMMA-BUTYROLACTONE
Authors:Eschenburg, S, Reubold, T.F.
Deposit date:2011-06-14
Release date:2011-08-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of full-length Apaf-1: how the death signal is relayed in the mitochondrial pathway of apoptosis.
Structure, 19, 2011
3SHF
DownloadVisualize
BU of 3shf by Molmil
Crystal structure of the R265S mutant of full-length murine Apaf-1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Apoptotic peptidase activating factor 1, GAMMA-BUTYROLACTONE
Authors:Eschenburg, S, Reubold, T.F.
Deposit date:2011-06-16
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Crystal structure of full-length Apaf-1: how the death signal is relayed in the mitochondrial pathway of apoptosis.
Structure, 19, 2011
3CPH
DownloadVisualize
BU of 3cph by Molmil
Crystal structure of Sec4 in complex with Rab-GDI
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rab GDP-dissociation inhibitor, ...
Authors:Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
Deposit date:2008-03-31
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
3CPJ
DownloadVisualize
BU of 3cpj by Molmil
Crystal structure of Ypt31 in complex with yeast Rab-GDI
Descriptor: CHLORIDE ION, GTP-binding protein YPT31/YPT8, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
Deposit date:2008-03-31
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
3CPI
DownloadVisualize
BU of 3cpi by Molmil
Crystal structure of yeast Rab-GDI
Descriptor: Rab GDP-dissociation inhibitor
Authors:Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
Deposit date:2008-03-31
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
6HD0
DownloadVisualize
BU of 6hd0 by Molmil
Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Plant UBX domain-containing protein 1, Transitional endoplasmic reticulum ATPase
Authors:Heinemann, U, Roske, Y, Banchenko, S.
Deposit date:2018-08-17
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.728 Å)
Cite:Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019
6HD3
DownloadVisualize
BU of 6hd3 by Molmil
Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48 homolog A, PHOSPHATE ION
Authors:Heinemann, U, Roske, Y, Banchenko, S, Arumughan, A, Petrovic, S.
Deposit date:2018-08-17
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019
2OUM
DownloadVisualize
BU of 2oum by Molmil
The first domain of L1 from Thermus thermophilus
Descriptor: 50S ribosomal protein L1
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Davydova, N, Garber, M.
Deposit date:2007-02-12
Release date:2008-02-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
2OV7
DownloadVisualize
BU of 2ov7 by Molmil
The first domain of the ribosomal protein L1 from Thermus thermophilus
Descriptor: 50S ribosomal protein L1
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Davydova, N, Garber, M.
Deposit date:2007-02-13
Release date:2007-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
4TYB
DownloadVisualize
BU of 4tyb by Molmil
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
Descriptor: (2R)-morpholin-4-yl(phenyl)ethanenitrile, Polyprotein
Authors:Shui, W, Yang, C, Lin, J, Chen, X, Qin, S, Chen, S.
Deposit date:2014-07-08
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline
Sci Rep, 5, 2015
4TXS
DownloadVisualize
BU of 4txs by Molmil
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
Descriptor: (4-hydroxyphenyl)acetonitrile, Polyprotein
Authors:Shui, W, Yang, C, Lin, J, Chen, X, Qin, S, Chen, S.
Deposit date:2014-07-07
Release date:2015-05-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline
Sci Rep, 5, 2015
4TY8
DownloadVisualize
BU of 4ty8 by Molmil
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
Descriptor: 6-methyl-2H-chromen-2-one, Polyprotein
Authors:Shui, W, Yang, C, Lin, J, Chen, X, Qin, S, Chen, S.
Deposit date:2014-07-08
Release date:2015-05-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline
Sci Rep, 5, 2015
4KHZ
DownloadVisualize
BU of 4khz by Molmil
Crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, Binding-protein-dependent transport systems inner membrane component, Maltose transport system permease protein MalF, ...
Authors:Oldham, M.L, Chen, S, Chen, J.
Deposit date:2013-05-01
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for substrate specificity in the Escherichia coli maltose transport system.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KI0
DownloadVisualize
BU of 4ki0 by Molmil
Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ABC transporter related protein, Binding-protein-dependent transport systems inner membrane component, ...
Authors:Oldham, M.L, Chen, S, Chen, J.
Deposit date:2013-05-01
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural basis for substrate specificity in the Escherichia coli maltose transport system.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KQX
DownloadVisualize
BU of 4kqx by Molmil
Mutant Slackia exigua KARI DDV in complex with NAD and an inhibitor
Descriptor: HISTIDINE, Ketol-acid reductoisomerase, MAGNESIUM ION, ...
Authors:Brinkmann-Chen, S, Flock, T, Cahn, J.K.B, Snow, C.D, Brustad, E.M, Mcintosh, J.A, Meinhold, P, Zhang, L, Arnold, F.H.
Deposit date:2013-05-15
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:General approach to reversing ketol-acid reductoisomerase cofactor dependence from NADPH to NADH.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KQW
DownloadVisualize
BU of 4kqw by Molmil
The structure of the Slackia exigua KARI in complex with NADP
Descriptor: Ketol-acid reductoisomerase, L(+)-TARTARIC ACID, MAGNESIUM ION, ...
Authors:Brinkmann-Chen, S, Flock, T, Cahn, J.K.B, Snow, C.D, Brustad, E.M, Mcintosh, J.A, Meinhold, P, Zhang, L, Arnold, F.H.
Deposit date:2013-05-15
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:General approach to reversing ketol-acid reductoisomerase cofactor dependence from NADPH to NADH.
Proc.Natl.Acad.Sci.USA, 110, 2013

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon