4M85
 
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7VLB
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3VN3
 | | Fungal antifreeze protein exerts hyperactivity by constructing an inequable beta-helix | | Descriptor: | 1,2-ETHANEDIOL, Antifreeze protein | | Authors: | Kondo, H, Xiao, N, Hanada, Y, Sugimoto, H, Hoshino, T, Garnham, C.P, Davies, P.L, Tsuda, S. | | Deposit date: | 2011-12-21 | | Release date: | 2012-06-06 | | Last modified: | 2013-07-17 | | Method: | X-RAY DIFFRACTION (0.95 Å) | | Cite: | Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation
Proc.Natl.Acad.Sci.USA, 109, 2012
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7VCF
 | | Cryo-EM structure of Chlamydomonas TOC-TIC supercomplex | | Descriptor: | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ... | | Authors: | Wu, J, Yan, Z, Jin, Z, Zhang, Y. | | Deposit date: | 2021-09-02 | | Release date: | 2022-11-30 | | Last modified: | 2024-10-09 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | Structure of a TOC-TIC supercomplex spanning two chloroplast envelope membranes.
Cell, 185, 2022
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7YE1
 | | The cryo-EM structure of C. crescentus GcrA-TACup | | Descriptor: | Cell cycle regulatory protein GcrA, DNA (57-MER)-non template, DNA (57-MER)-template, ... | | Authors: | Wu, X.X, Zhang, Y. | | Deposit date: | 2022-07-05 | | Release date: | 2023-01-18 | | Last modified: | 2024-07-03 | | Method: | ELECTRON MICROSCOPY (3.7 Å) | | Cite: | Cryo-EM structures of Caulobacter crescentus transcription activation complex with an essential cell cycle regulator GcrA
Nucleic Acids Res., 2023
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7YE2
 | | The cryo-EM structure of C. crescentus GcrA-TACdown | | Descriptor: | Cell cycle regulatory protein GcrA, DNA (90-MER)-non template, DNA (90-MER)-template, ... | | Authors: | Wu, X.X, Zhang, Y. | | Deposit date: | 2022-07-05 | | Release date: | 2023-01-18 | | Last modified: | 2024-07-03 | | Method: | ELECTRON MICROSCOPY (3.8 Å) | | Cite: | Cryo-EM structures of Caulobacter crescentus transcription activation complex with an essential cell cycle regulator GcrA
Nucleic Acids Res., 2023
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7XRD
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3UR4
 | | Crystal structure of human WD repeat domain 5 with compound | | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ... | | Authors: | Dong, A, Dombrovski, L, Senisterra, G, Wernimont, A, Wasney, G.A, Allali Hassani, A, Nguyen, K.T, Smil, D, Bolshan, Y, Hajian, T, Poda, G, Chau, I, Al-Awar, R, Bountra, C, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Brown, P, Schapira, M, Vedadi, M, Wu, H, Structural Genomics Consortium (SGC) | | Deposit date: | 2011-11-21 | | Release date: | 2011-12-14 | | Last modified: | 2023-09-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Small-molecule inhibition of MLL activity by disruption of its interaction with WDR5.
Biochem. J., 449, 2013
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8H97
 | | GH86 agarase Aga86A_Wa | | Descriptor: | Beta-agarase, CALCIUM ION, HEXAETHYLENE GLYCOL | | Authors: | Zhang, Y.Y, Dong, S, Feng, Y.G, Chang, Y.G. | | Deposit date: | 2022-10-25 | | Release date: | 2023-02-22 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.194 Å) | | Cite: | Structural characterization on a beta-agarase Aga86A_Wa from Wenyingzhuangia aestuarii reveals the prevalent methyl-galactose accommodation capacity of GH86 enzymes at subsite -1.
Carbohydr Polym, 306, 2023
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8YMM
 | | OSCA1.1-F516A open | | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-03-09 | | Release date: | 2024-10-02 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
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8YMN
 | | OSCA1.1-F516A pre-open 2 | | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-03-09 | | Release date: | 2024-10-02 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
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8YMO
 | | OSCA1.1-F516A pre-open 1 | | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-03-09 | | Release date: | 2024-10-02 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
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8YMP
 | | OSCA1.1-F516A nanodisc in LPC | | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-03-09 | | Release date: | 2024-10-02 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
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8YMQ
 | | OSCA1.1-F516A nanodisc | | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-03-09 | | Release date: | 2024-10-02 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
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8X8A
 | | Crystal structure of STBD1 LIR motif in complex with GABARAPL1 | | Descriptor: | Gamma-aminobutyric acid receptor-associated protein-like 1, Starch-binding domain-containing protein 1 | | Authors: | Zhang, Y.C, Pan, L.F. | | Deposit date: | 2023-11-27 | | Release date: | 2024-09-18 | | Method: | X-RAY DIFFRACTION (1.53 Å) | | Cite: | Decoding the molecular mechanism of selective autophagy of glycogen mediated by autophagy receptor STBD1.
Proc.Natl.Acad.Sci.USA, 121, 2024
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8X8K
 | | Crystal structure of STBD1 CBM20 domain in complex with maltotetraose | | Descriptor: | GLYCEROL, Starch-binding domain-containing protein 1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | | Authors: | Zhang, Y.C, Pan, L.F. | | Deposit date: | 2023-11-27 | | Release date: | 2024-09-18 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Decoding the molecular mechanism of selective autophagy of glycogen mediated by autophagy receptor STBD1.
Proc.Natl.Acad.Sci.USA, 121, 2024
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8ZAQ
 | | ExoC110T class 2 channelrhodopsin | | Descriptor: | C110T class2, POTASSIUM ION, RETINAL | | Authors: | Zhang, M.F. | | Deposit date: | 2024-04-25 | | Release date: | 2024-09-04 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Channelrhodopsins with distinct chromophores and binding patterns.
Nat Commun, 15, 2024
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8ZAN
 | | ExoChR2 channelrhodopsin | | Descriptor: | Archaeal-type opsin 2, RETINAL | | Authors: | Zhang, M.F. | | Deposit date: | 2024-04-25 | | Release date: | 2024-09-04 | | Method: | ELECTRON MICROSCOPY (2.4 Å) | | Cite: | Channelrhodopsins with distinct chromophores and binding patterns.
Nat Commun, 15, 2024
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8ZAP
 | | ExoC110T class 1 channelrhodopsin | | Descriptor: | C110T-class1, POTASSIUM ION, RETINAL | | Authors: | Zhang, M.F. | | Deposit date: | 2024-04-25 | | Release date: | 2024-09-04 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Channelrhodopsins with distinct chromophores and binding patterns.
Nat Commun, 15, 2024
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6Q1F
 | | Atomic structure of the Human Herpesvirus 6B Capsid and Capsid-Associated Tegument Complexes | | Descriptor: | Large structural phosphoprotein, Major capsid protein, Small capsomere-interacting protein, ... | | Authors: | Zhang, Y.B, Liu, W, Li, Z.H, Kumar, V, Alvarez-Cabrera, A.L, Leibovitch, E, Cui, Y.X, Mei, Y, Bi, G.Q, Jacobson, S, Zhou, Z.H. | | Deposit date: | 2019-08-03 | | Release date: | 2019-12-11 | | Last modified: | 2024-03-20 | | Method: | ELECTRON MICROSCOPY (9 Å) | | Cite: | Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes.
Nat Commun, 10, 2019
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8ZAM
 | | EndoChR2 channelrhodopsin | | Descriptor: | (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-04-25 | | Release date: | 2024-09-11 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | Channelrhodopsins with distinct chromophores and binding patterns.
Nat Commun, 15, 2024
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1J26
 | | Solution structure of a putative peptidyl-tRNA hydrolase domain in a mouse hypothetical protein | | Descriptor: | immature colon carcinoma transcript 1 | | Authors: | Nameki, N, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2002-12-25 | | Release date: | 2004-06-01 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality
J.Mol.Biol., 2010
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8ZAO
 | | ExoKCR1 channelrhodopsin | | Descriptor: | POTASSIUM ION, RETINAL, exoKCR1 | | Authors: | Zhang, M.F. | | Deposit date: | 2024-04-25 | | Release date: | 2024-09-04 | | Last modified: | 2024-10-16 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Channelrhodopsins with distinct chromophores and binding patterns.
Nat Commun, 15, 2024
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6A9Y
 | | The crystal structure of Mu homology domain of SGIP1 | | Descriptor: | SH3-containing GRB2-like protein 3-interacting protein 1 | | Authors: | Feng, Y, Liu, X. | | Deposit date: | 2018-07-16 | | Release date: | 2018-09-26 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | SGIP1 dimerizes via intermolecular disulfide bond in mu HD domain during cellular endocytosis.
Biochem. Biophys. Res. Commun., 505, 2018
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6JJH
 | | Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 | | Descriptor: | (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, POTASSIUM ION, RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3') | | Authors: | Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G. | | Deposit date: | 2019-02-25 | | Release date: | 2020-02-26 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.74 Å) | | Cite: | Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
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