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3ILR
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BU of 3ilr by Molmil
Structure of Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(4-1)-4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid, 4-deoxy-2-O-sulfo-beta-D-erythro-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ...
Authors:Garron, M.L, Cygler, M, Shaya, D.
Deposit date:2009-08-07
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural snapshots of heparin depolymerization by heparin lyase I.
J.Biol.Chem., 284, 2009
3ITD
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BU of 3itd by Molmil
Crystal structure of an inactive 17beta-Hydroxysteroid dehydrogenase (Y167F mutated form) from fungus Cochliobolus lunatus
Descriptor: 17beta-Hydroxysteroid dehydrogenase, CHLORIDE ION, GLYCEROL
Authors:Cassetta, A, Lamba, D, Krastanova, I.
Deposit date:2009-08-28
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural studies on a fungal 17beta-Hydroxysteroid dehydrogenase
To be Published
3VTX
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BU of 3vtx by Molmil
Crystal structure of MamA protein
Descriptor: GLYCEROL, MamA
Authors:Zeytuni, N, Baran, D, Davidov, G, Zarivach, R.
Deposit date:2012-06-08
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inter-phylum structural conservation of the magnetosome-associated TPR-containing protein, MamA
J.Struct.Biol., 180, 2012
1F0N
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BU of 1f0n by Molmil
MYCOBACTERIUM TUBERCULOSIS ANTIGEN 85B
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANTIGEN 85B
Authors:Anderson, D.H, Harth, G, Horwitz, M.A, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2000-05-16
Release date:2001-01-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An interfacial mechanism and a class of inhibitors inferred from two crystal structures of the Mycobacterium tuberculosis 30 kDa major secretory protein (Antigen 85B), a mycolyl transferase.
J.Mol.Biol., 307, 2001
3FGB
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BU of 3fgb by Molmil
Crystal structure of the Q89ZH8_BACTN protein from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR289b.
Descriptor: uncharacterized protein Q89ZH8_BACTN
Authors:Vorobiev, S.M, Lew, S, Seetharaman, J, Lee, D, Foote, L.E, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-12-05
Release date:2008-12-23
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the Q89ZH8_BACTN protein from Bacteroides thetaiotaomicron.
To be Published
1F0C
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BU of 1f0c by Molmil
STRUCTURE OF THE VIRAL SERPIN CRMA
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ICE INHIBITOR
Authors:Renatus, M, Zhou, Q, Stennicke, H.R, Snipas, S.J, Turk, D, Bankston, L.A, Liddington, R.C, Salvesen, G.S.
Deposit date:2000-05-15
Release date:2000-09-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of the apoptotic suppressor CrmA in its cleaved form.
Structure Fold.Des., 8, 2000
1F0E
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BU of 1f0e by Molmil
Cecropin A(1-8)-magainin 2(1-12) modified gig to P in dodecylphosphocholine micelles
Descriptor: CECROPIN A-MAGAININ 2 HYBRID PEPTIDE
Authors:Oh, D, Shin, S.Y, Lee, S, Kim, Y.
Deposit date:2000-05-16
Release date:2000-06-14
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Role of the hinge region and the tryptophan residue in the synthetic antimicrobial peptides, cecropin A(1-8)-magainin 2(1-12) and its analogues, on their antibiotic activities and structures.
Biochemistry, 39, 2000
1F0J
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BU of 1f0j by Molmil
CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 4B2B
Descriptor: ARSENIC, MAGNESIUM ION, PHOSPHODIESTERASE 4B, ...
Authors:Xu, R.X, Hassell, A.M, Vanderwall, D, Lambert, M.H, Holmes, W.D, Luther, M.A, Rocque, W.J, Milburn, M.V, Zhao, Y, Ke, H, Nolte, R.T.
Deposit date:2000-05-16
Release date:2000-07-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Atomic structure of PDE4: insights into phosphodiesterase mechanism and specificity.
Science, 288, 2000
1F0X
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BU of 1f0x by Molmil
CRYSTAL STRUCTURE OF D-LACTATE DEHYDROGENASE, A PERIPHERAL MEMBRANE RESPIRATORY ENZYME.
Descriptor: D-LACTATE DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Dym, O, Pratt, E.A, Ho, C, Eisenberg, D.
Deposit date:2000-05-17
Release date:2000-08-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of D-lactate dehydrogenase, a peripheral membrane respiratory enzyme.
Proc.Natl.Acad.Sci.USA, 97, 2000
2MC9
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BU of 2mc9 by Molmil
Cat r 1
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Mueller, G, London, R, Ghosh, D.
Deposit date:2013-08-16
Release date:2014-06-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Primary identification, biochemical characterization, and immunologic properties of the allergenic pollen cyclophilin cat R 1.
J.Biol.Chem., 289, 2014
1F1D
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BU of 1f1d by Molmil
Crystal structure of yeast H46C cuznsod mutant
Descriptor: COPPER (II) ION, COPPER-ZINC SUPEROXIDE DISMUTASE, ZINC ION
Authors:Hart, P.J, Ogihara, N.L, Liu, H, Nersissian, A.M, Valentine, J.S, Eisenberg, D.
Deposit date:2000-05-18
Release date:2002-12-18
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structure-based mechanism for copper-zinc superoxide dismutase.
Biochemistry, 38, 1999
1F30
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BU of 1f30 by Molmil
THE STRUCTURAL BASIS FOR DNA PROTECTION BY E. COLI DPS PROTEIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN, ZINC ION
Authors:Luo, J, Liu, D, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The Structural Basis for DNA Protection by E. coli Dps Protein
To be Published
3W0Q
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BU of 3w0q by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (N203A), ternary complex with AMP-PNP and hygromycin B
Descriptor: HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
7ZJS
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BU of 7zjs by Molmil
Structural basis of centromeric cohesion protection by SGO1
Descriptor: Cohesin subunit SA-2, Double-strand-break repair protein rad21 homolog, Shugoshin 1
Authors:Patel, A, Panne, D.
Deposit date:2022-04-11
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Structural basis of centromeric cohesion protection.
Nat.Struct.Mol.Biol., 30, 2023
1F1T
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BU of 1f1t by Molmil
CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE
Descriptor: MALACHITE GREEN APTAMER RNA, N,N'-TETRAMETHYL-ROSAMINE, STRONTIUM ION
Authors:Baugh, C, Grate, D, Wilson, C.
Deposit date:2000-05-19
Release date:2000-09-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:2.8 A crystal structure of the malachite green aptamer.
J.Mol.Biol., 301, 2000
6SGR
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BU of 6sgr by Molmil
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
Descriptor: DARPin, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrB
Authors:Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
Deposit date:2019-08-05
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
2M0T
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BU of 2m0t by Molmil
Structural characterization of the extended PDZ1 domain from NHERF1
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z.
Deposit date:2012-11-06
Release date:2013-04-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1.
J.Mol.Biol., 425, 2013
6SBS
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BU of 6sbs by Molmil
YtrA from Sulfolobus acidocaldarius, a GntR-family transcription factor
Descriptor: Regulatory protein
Authors:Lemmens, L, Valegard, K, Lindas, A.C, Peeters, E, Maes, D.
Deposit date:2019-07-22
Release date:2019-07-31
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:YtrASa, a GntR-Family Transcription Factor, Represses Two Genetic Loci Encoding Membrane Proteins inSulfolobus acidocaldarius.
Front Microbiol, 10, 2019
3W0P
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BU of 3w0p by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (D198A), ternary complex with ADP and hygromycin B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase
Authors:Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
1F1H
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BU of 1f1h by Molmil
CRYSTAL STRUCTURE OF GLUTAMINE SYNTHETASE FROM SALMONELLA TYPHIMURIUM WITH THALLIUM IONS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Gill, H.S, Eisenberg, D.
Deposit date:2000-05-19
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:The crystal structure of phosphinothricin in the active site of glutamine synthetase illuminates the mechanism of enzymatic inhibition.
Biochemistry, 40, 2001
6SHW
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BU of 6shw by Molmil
N-terminal domain of Drosophila X Virus VP3
Descriptor: SULFATE ION, Structural polyprotein
Authors:Ferrero, D.S, Garriga, D, Guerra, P, Uson, I, Verdaguer, N.
Deposit date:2019-08-08
Release date:2020-11-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and dsRNA-binding activity of the Birnavirus Drosophila X Virus VP3 protein.
J.Virol., 2020
2M6U
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BU of 2m6u by Molmil
NMR Structure of CbpAN from Streptococcus pneumoniae
Descriptor: Choline binding protein A
Authors:Liu, A, Yan, H, Achila, D, Martinez-Hackert, E, Li, Y, Banerjee, R.
Deposit date:2013-04-10
Release date:2014-04-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural determinants of host specificity of complement Factor H recruitment by Streptococcus pneumoniae.
Biochem.J., 465, 2015
3IEC
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BU of 3iec by Molmil
Helicobacter pylori CagA Inhibits PAR1/MARK Family Kinases by Mimicking Host Substrates
Descriptor: Cytotoxicity-associated immunodominant antigen, Serine/threonine-protein kinase MARK2
Authors:Stebbins, C.E, Nesic, D, Miller, M.
Deposit date:2009-07-22
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Helicobacter pylori CagA inhibits PAR1-MARK family kinases by mimicking host substrates.
Nat.Struct.Mol.Biol., 17, 2010
2MLO
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BU of 2mlo by Molmil
Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a Membrane bound form
Descriptor: MCP-1 receptor
Authors:Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H.
Deposit date:2014-03-04
Release date:2014-10-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT.
Febs J., 281, 2014
7ZPN
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BU of 7zpn by Molmil
Crystal Structure of IscR from Dinoroseobacter shibae
Descriptor: GLYCEROL, HTH-type transcriptional regulator, SULFATE ION
Authors:Lukat, P, Ploetzky, L, Blankenfeldt, W, Jahn, D, Haertig, E.
Deposit date:2022-04-28
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Dinoroseobacter shibae IscR homolog acts as a repressor for iron acquisition genes
To Be Published

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PDB entries from 2024-08-21

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