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6PDX
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BU of 6pdx by Molmil
Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C585 Fab heavy chain, ...
Authors:Qiu, Y, Zhou, Y.
Deposit date:2019-06-19
Release date:2019-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.993 Å)
Cite:Mapping of a Novel H3-Specific Broadly Neutralizing Monoclonal Antibody Targeting the Hemagglutinin Globular Head Isolated from an Elite Influenza Virus-Immunized Donor Exhibiting Serological Breadth.
J.Virol., 94, 2020
6FCE
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BU of 6fce by Molmil
NMR ensemble of Macrocyclic Peptidomimetic Containing Constrained a,a-dialkylated Amino Acids with Potent and Selective Activity at Human Melanocortin Receptors
Descriptor: ACP-HIS-DPHE-ARG-TRP-ASP-NH2
Authors:Brancaccio, D, Carotenuto, A, Grieco, P, Merlino, F, Zhou, Y, Cai, M, Yousif, A.M, Di Maro, S, Novellino, E, Hruby, V.J.
Deposit date:2017-12-20
Release date:2018-04-25
Last modified:2018-05-23
Method:SOLUTION NMR
Cite:Development of Macrocyclic Peptidomimetics Containing Constrained alpha , alpha-Dialkylated Amino Acids with Potent and Selective Activity at Human Melanocortin Receptors.
J. Med. Chem., 61, 2018
6GHM
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BU of 6ghm by Molmil
Structure of PP1 alpha phosphatase bound to ASPP2
Descriptor: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Apoptosis-stimulating of p53 protein 2, ...
Authors:Mouilleron, S, Bertran, T.M, Tapon, N, Zhou, Y.
Deposit date:2018-05-08
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:ASPP proteins discriminate between PP1 catalytic subunits through their SH3 domain and the PP1 C-tail.
Nat Commun, 10, 2019
8C9M
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BU of 8c9m by Molmil
HERV-K Gag immature lattice
Descriptor: Gag protein
Authors:Krebs, A.-S, Liu, H.-F, Zhou, Y, Rey, J.S, Levintov, L, Perilla, J.R, Bartesaghi, A, Zhang, P.
Deposit date:2023-01-23
Release date:2023-02-01
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular architecture and conservation of an immature human endogenous retrovirus.
Biorxiv, 2023
2XNI
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BU of 2xni by Molmil
Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates
Descriptor: (1-{[(10-tert-butyl-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19,23,23a-tetradecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosin-7(3H)-yl)carbonyl]amino}-3-hydroxypropyl)(trihydroxy)borate(1-), MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Zhou, Y, Li, Q, Plattner, J.J, Baker, S.J, Zhang, S, Kazmierski, W.M, Wright, L.L, Smith, G.K, Grimes, R.M, Crosby, R.M, Creech, K.L, Carballo, L.H, Slater, M.J, Jarvest, R.L, Thommes, P, Hubbard, J.A, Convery, M.A, Nassau, P.M, McDowell, W, Skarzynski, T.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, Pennicott, L.E, Zou, W, Wright, J.
Deposit date:2010-08-02
Release date:2011-08-17
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.
Bioorg.Med.Chem.Lett., 20, 2010
6S47
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BU of 6s47 by Molmil
Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1
Descriptor: 18S rRNA (1707-MER), 28S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Kasari, V, Pochopien, A.A, Margus, T, Murina, V, Turnbull, K, Zhou, Y, Nissan, T, Graf, M, Novacek, J, Atkinson, G.C, Johansson, M.J.O, Wilson, D.N, Hauryliuk, V.
Deposit date:2019-06-26
Release date:2019-07-24
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling.
Nucleic Acids Res., 47, 2019
5JDB
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BU of 5jdb by Molmil
Binding specificity of P[8] VP8* proteins of rotavirus vaccine strains with histo-blood group antigens
Descriptor: Outer capsid protein VP4
Authors:Sun, X, Guo, N, Li, D, Zhou, Y, Jin, M, Xie, G, Pang, L, Zhang, Q, Cao, Y, Duan, Z.
Deposit date:2016-04-16
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Binding specificity of P[8] VP8* proteins of rotavirus vaccine strains with histo-blood group antigens.
Virology, 495, 2016
1BK9
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BU of 1bk9 by Molmil
PHOSPHOLIPASE A2 MODIFIED BY PBPB
Descriptor: 1,4-BUTANEDIOL, CALCIUM ION, PHOSPHOLIPASE A2, ...
Authors:Zhao, H, Tang, L, Wang, X, Lin, Z, Zhou, Y.
Deposit date:1998-07-16
Release date:1999-03-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a snake venom phospholipase A2 modified by p-bromo-phenacyl-bromide.
Toxicon, 36, 1998
3A8E
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BU of 3a8e by Molmil
The structure of AxCesD octamer complexed with cellopentaose
Descriptor: Cellulose synthase operon protein D, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, S.Q, Tajima, K, Zhou, Y, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
3AJ2
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BU of 3aj2 by Molmil
The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum
Descriptor: Cellulose synthase operon protein D
Authors:Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M.
Deposit date:2010-05-20
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
3AJ1
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BU of 3aj1 by Molmil
The structure of AxCeSD octamer (N-terminal HIS-tag) from Acetobacter xylinum
Descriptor: Cellulose synthase operon protein D
Authors:Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M.
Deposit date:2010-05-20
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
1JVM
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BU of 1jvm by Molmil
KCSA POTASSIUM CHANNEL WITH TBA (TETRABUTYLAMMONIUM) AND RUBIDIUM
Descriptor: RUBIDIUM ION, TETRABUTYLAMMONIUM ION, Voltage-gated potassium channel
Authors:Morais-Cabral, J.H, Zhou, Y, MacKinnon, R.
Deposit date:2001-08-30
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Energetic optimization of ion conduction rate by the K+ selectivity filter.
Nature, 414, 2001
2DWD
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BU of 2dwd by Molmil
crystal structure of KcsA-FAB-TBA complex in Tl+
Descriptor: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB HEAVY CHAIN, ANTIBODY FAB LIGHT CHAIN, ...
Authors:Yohannan, S, Zhou, Y.
Deposit date:2006-08-10
Release date:2007-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel
J.Mol.Biol., 366, 2007
2DWE
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BU of 2dwe by Molmil
Crystal structure of KcsA-FAB-TBA complex in Rb+
Descriptor: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB HEAVY CHAIN, ANTIBODY FAB LIGHT CHAIN, ...
Authors:Yohannan, S, Zhou, Y.
Deposit date:2006-08-10
Release date:2007-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel
J.Mol.Biol., 366, 2007
1KGS
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BU of 1kgs by Molmil
Crystal Structure at 1.50 A of an OmpR/PhoB Homolog from Thermotoga maritima
Descriptor: DNA BINDING RESPONSE REGULATOR D, THIOCYANATE ION
Authors:Buckler, D.R, Zhou, Y, Stock, A.M.
Deposit date:2001-11-28
Release date:2001-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima.
Structure, 10, 2002
6B7N
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BU of 6b7n by Molmil
Cryo-electron microscopy structure of porcine delta coronavirus spike protein in the pre-fusion state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shang, J, Zheng, Y, Yang, Y, Liu, C, Geng, Q, Tai, W, Du, L, Zhou, Y, Zhang, W, Li, F.
Deposit date:2017-10-04
Release date:2017-10-25
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-Electron Microscopy Structure of Porcine Deltacoronavirus Spike Protein in the Prefusion State
J. Virol., 92, 2018
6AF0
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BU of 6af0 by Molmil
Structure of Ctr9, Paf1 and Cdc73 ternary complex from Myceliophthora thermophila
Descriptor: Cdc73 protein, Ctr9 protein, Paf1 protein
Authors:Wang, Z, Deng, P, Zhou, Y.
Deposit date:2018-08-07
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ACV
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BU of 6acv by Molmil
the solution NMR structure of MBD domain
Descriptor: Methyl-CpG-binding domain-containing protein 11
Authors:Li, S.L, Feng, Y.Y, Zhou, Y, Ding, Y.M, Liu, K, Nie, Y, Li, F, Yang, Y.Y.
Deposit date:2018-07-27
Release date:2019-07-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:the solution NMR structure of MBD domains
To Be Published
3OOS
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BU of 3oos by Molmil
The structure of an alpha/beta fold family hydrolase from Bacillus anthracis str. Sterne
Descriptor: Alpha/beta hydrolase family protein, GLYCEROL, SULFATE ION, ...
Authors:Fan, Y, Tan, K, Bigelow, L, Hamilton, J, Li, H, Zhou, Y, Clancy, S, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-11-10
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure of an alpha/beta fold family hydrolase from Bacillus anthracis str. Sterne
To be Published
3OOP
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BU of 3oop by Molmil
The structure of a protein with unknown function from Listeria innocua Clip11262
Descriptor: Lin2960 protein
Authors:Fan, Y, Li, H, Zhou, Y, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The structure of a protein with unknown function from Listeria innocua Clip11262
To be Published
8T2I
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BU of 8t2i by Molmil
Negative stain EM assembly of MYC, JAZ, and NINJA complex
Descriptor: AFP homolog 2, Maltose/maltodextrin-binding periplasmic protein, Protein TIFY 10A, ...
Authors:Zhou, X.E, Zhang, Y, Zhou, Y, He, Q, Cao, X, Kariapper, L, Suino-Powell, K, Zhu, Y, Zhang, F, Karsten, M.
Deposit date:2023-06-06
Release date:2023-06-28
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (10.4 Å)
Cite:Assembly of JAZ-JAZ and JAZ-NINJA complexes in jasmonate signaling.
Plant Commun., 4, 2023
5JBM
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BU of 5jbm by Molmil
Crystal structgure of Cac1 C-terminus
Descriptor: Chromatin assembly factor 1 subunit p90
Authors:Churchill, M.E.A, Liu, W, Zhou, Y.
Deposit date:2016-04-13
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Cac1 subunit of histone chaperone CAF-1 organizes CAF-1-H3/H4 architecture and tetramerizes histones.
Elife, 5, 2016
3BV9
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BU of 3bv9 by Molmil
Structure of Thrombin Bound to the Inhibitor FM19
Descriptor: FM19 inhibitor, GLYCEROL, IODIDE ION, ...
Authors:Nieman, M.T, Burke, F, Warnock, M, Zhou, Y, Sweigert, J, Chen, A, Ricketts, D, Lucchesi, B.R, Chen, Z, Di Cera, E, Hilfinger, J, Mosberg, H.I, Schmaier, A.H.
Deposit date:2008-01-05
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thrombostatin FM compounds: direct thrombin inhibitors - mechanism of action in vitro and in vivo.
J.Thromb.Haemost., 6, 2008
8J8Q
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BU of 8j8q by Molmil
Structure of the four-component Paf1 complex from Saccharomyces eubayanus
Descriptor: CDC73-like protein, CTR9-like protein, PAF1-like protein, ...
Authors:Wang, Z, Qin, Y, Zhou, Y, Cao, Y.
Deposit date:2023-05-02
Release date:2023-05-24
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus .
Int J Mol Sci, 24, 2023
8J8P
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BU of 8j8p by Molmil
Structure of the four-component Paf1 complex from Saccharomyces eubayanus
Descriptor: CDC73-like protein, CTR9-like protein, PAF1-like protein, ...
Authors:Wang, Z, Qin, Y, Zhou, Y, Cao, Y.
Deposit date:2023-05-02
Release date:2023-05-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus .
Int J Mol Sci, 24, 2023

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