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7YDI
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BU of 7ydi by Molmil
SARS-CoV-2 Spike (6P) in complex with 3 R1-32 Fabs and 3 ACE2, focused refinement of RBD region
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32, Light chain of R1-32, ...
Authors:Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
Deposit date:2022-07-04
Release date:2022-08-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YDY
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BU of 7ydy by Molmil
SARS-CoV-2 Spike (6P) in complex with 1 R1-32 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
Authors:Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
Deposit date:2022-07-04
Release date:2022-08-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (4.75 Å)
Cite:SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YEG
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BU of 7yeg by Molmil
SARS-CoV-2 Spike (6P) in complex with 3 R1-32 Fabs and 3 ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
Deposit date:2022-07-05
Release date:2022-08-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
7YE5
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BU of 7ye5 by Molmil
SARS-CoV-2 Spike (6P) in complex with 2 R1-32 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
Authors:Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
Deposit date:2022-07-05
Release date:2022-08-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (6.75 Å)
Cite:SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022
6PB4
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BU of 6pb4 by Molmil
The E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Liu, B, Shi, W.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
6PB5
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BU of 6pb5 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Liu, B, Shi, W.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.52 Å)
Cite:Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
6PB6
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BU of 6pb6 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 2
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Liu, B, Shi, W.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.29 Å)
Cite:Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
7YG7
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BU of 7yg7 by Molmil
Structure of the Spring Viraemia of Carp Virus ribonucleoprotein Complex
Descriptor: Nucleoprotein, RNA (99-mer)
Authors:Liu, B, Wang, Z.X, Yang, T, Yu, D.Q, Ouyang, Q.
Deposit date:2022-07-11
Release date:2023-03-15
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the Spring Viraemia of Carp Virus Ribonucleoprotein Complex Reveals Its Assembly Mechanism and Application in Antiviral Drug Screening.
J.Virol., 97, 2023
8DKC
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BU of 8dkc by Molmil
P. gingivalis RNA Polymerase
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Liu, B, Bu, F.
Deposit date:2022-07-05
Release date:2023-06-21
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM Structure of Porphyromonas gingivalis RNA Polymerase.
J.Mol.Biol., 436, 2024
5LVY
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BU of 5lvy by Molmil
Structural studies of the Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli
Descriptor: Adhesin protein
Authors:Liu, B, Matthews, S.
Deposit date:2016-09-14
Release date:2017-07-26
Last modified:2017-08-02
Method:SOLUTION NMR
Cite:Structural and functional studies of Escherichia coli aggregative adherence fimbriae (AAF/V) reveal a deficiency in extracellular matrix binding.
Biochim. Biophys. Acta, 1865, 2017
8WYP
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BU of 8wyp by Molmil
High Resolution Crystal Structure of Brd4 BD-1 in Complex with a Novel Inhibitor Precursor
Descriptor: 3-bromanylimidazo[1,2-a]pyridin-6-amine, Bromodomain-containing protein 4
Authors:Liu, B, Ma, X.
Deposit date:2023-10-31
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:High resolution crystal structure of BRD4-BD1 in complex with a novel inhibitor precursor.
Biochem.Biophys.Res.Commun., 690, 2024
8U3B
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BU of 8u3b by Molmil
Cryo-EM structure of E. coli NarL-transcription activation complex at 3.2A
Descriptor: DNA (69-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Liu, B, Kompaniiets, D, Wang, D.
Deposit date:2023-09-07
Release date:2024-01-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis for transcription activation by the nitrate-responsive regulator NarL.
Nucleic Acids Res., 52, 2024
5YFE
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BU of 5yfe by Molmil
Enzymatic and structural characterization of the poly (ethylene terephthalate) hydrolase PETase from I. sakaiensis
Descriptor: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Bao, R, He, L.H, Liu, B.
Deposit date:2017-09-21
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Protein Crystallography and Site-Direct Mutagenesis Analysis of the Poly(ethylene terephthalate) Hydrolase PETase from Ideonella sakaiensis.
Chembiochem, 2018
2ND4
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BU of 2nd4 by Molmil
A distinct sortase SrtB anchors and processes a streptococcal adhesin AbpA with a novel structural property
Descriptor: Amylase-binding protein AbpA
Authors:Liu, B, Zhu, F, Wu, H, Matthews, S.
Deposit date:2016-05-05
Release date:2016-09-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A distinct sortase SrtB anchors and processes a streptococcal adhesin AbpA with a novel structural property.
Sci Rep, 6, 2016
3UIZ
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BU of 3uiz by Molmil
Crystal structure of SefD_dscA in D2O
Descriptor: Chimera protein of SefD and SefA
Authors:Garnett, J.A, Wei-chao, L, Liu, B, Matthews, S.J.
Deposit date:2011-11-07
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.
Biochem.Biophys.Res.Commun., 421, 2012
3UIY
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BU of 3uiy by Molmil
Crystal structure of SefD_dscA in H2O
Descriptor: Chimera protein of SefD and SefA
Authors:Garnett, J.A, Wei-chao, L, Liu, B, Matthews, S.J.
Deposit date:2011-11-07
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.
Biochem.Biophys.Res.Commun., 421, 2012
5Z1P
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BU of 5z1p by Molmil
Structural basis of the improved sweetness and stability of the single-chain sweet-tasting protein monellin (MNEI)
Descriptor: Monellin chain B,Monellin chain A
Authors:Liu, B.
Deposit date:2017-12-27
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure basis of the improved sweetness and thermostability of a unique double-sites single-chain sweet-tasting protein monellin (MNEI) mutant
Biochimie, 154, 2018
2M6O
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BU of 2m6o by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Descriptor: Uncharacterized protein
Authors:Liu, B, Tabib-Salazar, A, Doughty, P, Lewis, R, Ghosh, S, Parsy, M, Simpson, P, Matthews, S, Paget, M.
Deposit date:2013-04-06
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
2M6P
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BU of 2m6p by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Descriptor: uncharacterized protein Mb2076
Authors:Liu, B, Parsy, M, Paget, M, Matthews, S.
Deposit date:2013-04-06
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
7BOV
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BU of 7bov by Molmil
The Structure of Bacillus subtilis glycosyltransferase,Bs-YjiC
Descriptor: GLYCEROL, SODIUM ION, Uncharacterized UDP-glucosyltransferase YjiC
Authors:Zhao, C, Liu, B, Zhao, N.L, Luo, Y.Z, Bao, R.
Deposit date:2020-03-20
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Structural and biochemical studies of the glycosyltransferase Bs-YjiC from Bacillus subtilis.
Int.J.Biol.Macromol., 166, 2021
7BY7
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BU of 7by7 by Molmil
Bacteriophage SPO1 protein Gp46
Descriptor: Putative gene 46 protein
Authors:Liu, B, Zhang, P.
Deposit date:2020-04-22
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins
Proc.Natl.Acad.Sci.USA, 119, 2022
6J4C
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BU of 6j4c by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under 10 mM ZnSO4
Descriptor: ACETIC ACID, Cupin superfamily protein, GLYCEROL, ...
Authors:Hou, Y, Liu, B, Hu, K, Zhang, R.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural basis of the mechanism of beta-methyl epimerization by enzyme MarH.
Org.Biomol.Chem., 17, 2019
6J4D
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BU of 6j4d by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under pH 4.7, without Zn
Descriptor: CITRATE ANION, Cupin superfamily protein, GLYCEROL
Authors:Hou, Y, Liu, B, Hu, K, Zhang, R.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis for the Isomerization Mechanism of MarH
To Be Published
6J4B
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BU of 6j4b by Molmil
Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under 400 mM Zinc acetate
Descriptor: ACETIC ACID, Cupin superfamily protein, GLYCEROL, ...
Authors:Hou, Y, Liu, B, Hu, K, Zhang, R.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural basis of the mechanism of beta-methyl epimerization by enzyme MarH.
Org.Biomol.Chem., 17, 2019
6L6V
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BU of 6l6v by Molmil
SPO1 Gp44 N-terminal region (1-55)
Descriptor: E3 protein
Authors:Liu, B, Wang, Z.
Deposit date:2019-10-29
Release date:2021-05-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Bacteriophage DNA Mimic Protein Employs a Non-specific Strategy to Inhibit the Bacterial RNA Polymerase.
Front Microbiol, 12, 2021

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PDB entries from 2024-06-05

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