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7P0T
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BU of 7p0t by Molmil
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID
Descriptor: Beta-2-microglobulin, CHLORIDE ION, Derived peptide gp33-41 from LCMV, ...
Authors:Broggini, L, Ricagno, S.
Deposit date:2021-06-30
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.605 Å)
Cite:l- to d-Amino Acid Substitution in the Immunodominant LCMV-Derived Epitope gp33 Highlights the Sensitivity of the TCR Recognition Mechanism for the MHC/Peptide Structure and Dynamics.
Acs Omega, 7, 2022
7P0A
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BU of 7p0a by Molmil
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID (p3P6f)
Descriptor: Beta-2-microglobulin, CHLORIDE ION, H-2 class I histocompatibility antigen, ...
Authors:Broggini, L, Ricagno, S.
Deposit date:2021-06-29
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:l- to d-Amino Acid Substitution in the Immunodominant LCMV-Derived Epitope gp33 Highlights the Sensitivity of the TCR Recognition Mechanism for the MHC/Peptide Structure and Dynamics.
Acs Omega, 7, 2022
6LJS
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BU of 6ljs by Molmil
Crystal structure of human FABP4 in complex with a novel inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-[(2-phenylphenyl)amino]benzoic acid, Fatty acid-binding protein, ...
Authors:Su, H.X, Zhang, X.L, Li, M.J, Xu, Y.C.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Exploration of Fragment Binding Poses Leading to Efficient Discovery of Highly Potent and Orally Effective Inhibitors of FABP4 for Anti-inflammation.
J.Med.Chem., 63, 2020
3GZU
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BU of 3gzu by Molmil
VP7 recoated rotavirus DLP
Descriptor: Inner capsid protein VP2, Intermediate capsid protein VP6, ZINC ION
Authors:Chen, J.Z, Settembre, E.C, Harrison, S.C, Grigorieff, N.
Deposit date:2009-04-07
Release date:2009-07-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HDB
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BU of 3hdb by Molmil
Crystal structure of AaHIV, A metalloproteinase from venom of Agkistrodon Acutus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AAHIV, CALCIUM ION, ...
Authors:Zhu, Z.Q, Niu, L.W, Teng, M.K.
Deposit date:2009-05-07
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis of the autolysis of AaHIV suggests a novel target recognizing model for ADAM/reprolysin family proteins
Biochem.Biophys.Res.Commun., 386, 2009
1P5J
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BU of 1p5j by Molmil
Crystal Structure Analysis of Human Serine Dehydratase
Descriptor: L-serine dehydratase, PYRIDOXAL-5'-PHOSPHATE
Authors:Sun, L, Liu, Y, Rao, Z.
Deposit date:2003-04-27
Release date:2004-06-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallization and preliminary crystallographic analysis of human serine dehydratase.
Acta Crystallogr.,Sect.D, 59, 2003
5ULA
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BU of 5ula by Molmil
Crystal Structure of the First Bromodomain of Human BRD4 in Complex With Cyclic Vinylogous Amide Inhibitor MS402
Descriptor: 3-chloranyl-~{N}-(4-methoxyphenyl)-4-[(2-methyl-3-oxidanylidene-cyclopenten-1-yl)amino]benzamide, Bromodomain-containing protein 4
Authors:Plotnikov, A.N, Joshua, j, Zhou, M.-M.
Deposit date:2017-01-24
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:BET N-terminal bromodomain inhibition selectively blocks Th17 cell differentiation and ameliorates colitis in mice.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6WHC
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BU of 6whc by Molmil
CryoEM Structure of the glucagon receptor with a dual-agonist peptide
Descriptor: Dual-agonist peptide, Glucagon receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Belousoff, M.J, Sexton, P, Danev, R.
Deposit date:2020-04-07
Release date:2020-05-27
Last modified:2020-07-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-electron microscopy structure of the glucagon receptor with a dual-agonist peptide.
J.Biol.Chem., 295, 2020
7Z8O
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BU of 7z8o by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
Descriptor: 2,4,6-tris(chloromethyl)-1,3,5-triazine, GLYCEROL, Spike protein S1, ...
Authors:Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
Deposit date:2022-03-18
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
5LBV
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BU of 5lbv by Molmil
Structural basis of zika and dengue virus potent antibody cross-neutralization
Descriptor: SODIUM ION, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, envelope protein E
Authors:Barba-Spaeth, G.
Deposit date:2016-06-17
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of potent Zika-dengue virus antibody cross-neutralization.
Nature, 536, 2016
8AAA
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BU of 8aaa by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
Descriptor: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Spike protein S1, Stapled peptide
Authors:Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
Deposit date:2022-06-30
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
3U78
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BU of 3u78 by Molmil
E67-2 selectively inhibits KIAA1718, a human histone H3 lysine 9 Jumonji demethylase
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 7-[(5-aminopentyl)oxy]-N~4~-(1-benzylpiperidin-4-yl)-N~2~-[3-(dimethylamino)propyl]-6-methoxyquinazoline-2,4-diamine, ...
Authors:Upadhyay, A.K, Cheng, X.
Deposit date:2011-10-13
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.689 Å)
Cite:An Analog of BIX-01294 Selectively Inhibits a Family of Histone H3 Lysine 9 Jumonji Demethylases.
J.Mol.Biol., 416, 2012
6KUJ
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BU of 6kuj by Molmil
Structure of influenza D virus polymerase bound to cRNA promoter in class 1
Descriptor: 3'-cRNA promoter, 5'-cRNA promoter, Polymerase 3, ...
Authors:Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y.
Deposit date:2019-09-02
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of influenza D virus polymerase bound to cRNA promoter in Mode A conformation
NAT NANOTECHNOL, 2019
6KNY
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BU of 6kny by Molmil
Structure of Amuc_1100 without transmembrane region from Akkermansia muciniphila
Descriptor: Protein Amuc_1100
Authors:Mou, L.Q, Xiao, Q.J, Deng, D.
Deposit date:2019-08-07
Release date:2020-04-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of monomeric Amuc_1100 from Akkermansia muciniphila.
Acta Crystallogr.,Sect.F, 76, 2020
6L4V
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BU of 6l4v by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, Asparaginyl endopeptidase, DI(HYDROXYETHYL)ETHER
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
6L4W
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BU of 6l4w by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Asparaginyl endopeptidase, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
6LYU
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BU of 6lyu by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6LYR
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BU of 6lyr by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6LYS
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BU of 6lys by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6LYQ
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BU of 6lyq by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
5DEP
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BU of 5dep by Molmil
Structure of Pseudomonas aeruginosa LpxA in complex with UDP-GlcNAc
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Smith, E.W, Chen, Y.
Deposit date:2015-08-25
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
4O94
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BU of 4o94 by Molmil
Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate
Descriptor: CHLORIDE ION, SUCCINIC ACID, TRAP dicarboxylate transporter DctP subunit
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-01-01
Release date:2014-01-22
Last modified:2015-02-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4OVP
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BU of 4ovp by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFITOBACTER sp. NAS-14.1, TARGET EFI-510292, WITH BOUND ALPHA-D-MANURONATE
Descriptor: C4-dicarboxylate transport system substrate-binding protein, alpha-D-mannopyranuronic acid
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-11
Release date:2014-01-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
5DG3
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BU of 5dg3 by Molmil
Structure of Pseudomonas aeruginosa LpxA in complex with UDP-3-O-(R-3-hydroxydecanoyl)-GlcNAc
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, uridine-5'-diphosphate-3-O-(R-3-hydroxydecanoyl)-N-acetyl-D-glucosamine
Authors:Smith, E.W, Chen, Y.
Deposit date:2015-08-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
4OVQ
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BU of 4ovq by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS, TARGET EFI-510230, WITH BOUND BETA-D-GLUCURONATE
Descriptor: CHLORIDE ION, TRAP dicarboxylate ABC transporter, substrate-binding protein, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-11
Release date:2014-01-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015

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