Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3QUB
DownloadVisualize
BU of 3qub by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47ala mutant complexed with sulfate
Descriptor: INORGANIC PYROPHOSPHATASE, SULFATE ION
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-02-23
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3QX7
DownloadVisualize
BU of 3qx7 by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron complexed with phosphate, a closed cap conformation
Descriptor: INORGANIC PYROPHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-03-01
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
4OV6
DownloadVisualize
BU of 4ov6 by Molmil
Crystal structure of PCSK9(53-451) with Adnectin
Descriptor: 1,2-ETHANEDIOL, Adnectin, Proprotein convertase subtilisin/kexin type 9, ...
Authors:Khan, J.A.
Deposit date:2014-02-20
Release date:2014-07-02
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Pharmacologic Profile of the Adnectin BMS-962476, a Small Protein Biologic Alternative to PCSK9 Antibodies for Low-Density Lipoprotein Lowering.
J.Pharmacol.Exp.Ther., 350, 2014
3QUQ
DownloadVisualize
BU of 3quq by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, an open cap conformation
Descriptor: CHLORIDE ION, FORMIC ACID, INORGANIC PYROPHOSPHATASE, ...
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-02-24
Release date:2011-04-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
4DHD
DownloadVisualize
BU of 4dhd by Molmil
Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis
Descriptor: ACETATE ION, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-01-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
1JKP
DownloadVisualize
BU of 1jkp by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
Descriptor: 5'-D(*AP*TP*CP*TP*TP*CP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*GP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
Authors:Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
Deposit date:2001-07-13
Release date:2002-02-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JQE
DownloadVisualize
BU of 1jqe by Molmil
Crystal Structure Analysis of Human Histamine Methyltransferase (Ile105 Polymorphic Variant) Complexed with AdoHcy and Antimalarial Drug Quinacrine
Descriptor: Histamine N-Methyltransferase, QUINACRINE, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Horton, J.R, Sawada, K, Nishibori, M, Zhang, X, Cheng, X.
Deposit date:2001-08-06
Release date:2002-08-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Two polymorphic forms of human histamine methyltransferase: structural, thermal, and kinetic comparisons.
Structure, 9, 2001
1K2X
DownloadVisualize
BU of 1k2x by Molmil
Crystal structure of putative asparaginase encoded by Escherichia coli ybiK gene
Descriptor: CHLORIDE ION, Putative L-asparaginase, SODIUM ION
Authors:Borek, D, Jaskolski, M.
Deposit date:2001-09-30
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal packing of plant-type L-asparaginase from Escherichia coli.
Acta Crystallogr.,Sect.D, 64, 2008
1JKQ
DownloadVisualize
BU of 1jkq by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
Descriptor: 5'-D(*AP*TP*CP*TP*TP*AP*TP*AP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*TP*AP*TP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
Authors:Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
Deposit date:2001-07-13
Release date:2002-02-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
4EU9
DownloadVisualize
BU of 4eu9 by Molmil
Succinyl-CoA:acetate CoA-transferase (AarCH6-R228E) in complex with CoA and a covalent glutamyl-CoA thioester adduct
Descriptor: CHLORIDE ION, COENZYME A, Succinyl-CoA:acetate coenzyme A transferase
Authors:Mullins, E.A, Kappock, T.J.
Deposit date:2012-04-25
Release date:2012-10-10
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.479 Å)
Cite:Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
4EUA
DownloadVisualize
BU of 4eua by Molmil
Succinyl-CoA:acetate CoA-transferase (AarCH6-R228E) in complex with CoA (anomalous dataset)
Descriptor: CHLORIDE ION, COENZYME A, Succinyl-CoA:acetate coenzyme A transferase
Authors:Mullins, E.A, Kappock, T.J.
Deposit date:2012-04-25
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
1KB0
DownloadVisualize
BU of 1kb0 by Molmil
Crystal Structure of Quinohemoprotein Alcohol Dehydrogenase from Comamonas testosteroni
Descriptor: CALCIUM ION, GLYCEROL, HEME C, ...
Authors:Rozeboom, H.J, Oubrie, A.
Deposit date:2001-11-05
Release date:2001-12-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of quinohemoprotein alcohol dehydrogenase from Comamonas testosteroni: structural basis for substrate oxidation and electron transfer.
J.Biol.Chem., 277, 2002
1KNG
DownloadVisualize
BU of 1kng by Molmil
Crystal structure of CcmG reducing oxidoreductase at 1.14 A
Descriptor: THIOL:DISULFIDE INTERCHANGE PROTEIN CYCY
Authors:Edeling, M.A, Guddat, L.W, Fabianek, R.A, Thony-Meyer, L, Martin, J.L.
Deposit date:2001-12-18
Release date:2002-07-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structure of CcmG/DsbE at 1.14 A resolution: high-fidelity reducing activity in an indiscriminately oxidizing environment
Structure, 10, 2002
4CRS
DownloadVisualize
BU of 4crs by Molmil
Human Protein Kinase N2 (PKN2, PRKCL2) in complex with ATPgammaS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, SERINE/THREONINE-PROTEIN KINASE N2, ...
Authors:Mathea, S, Elkins, J.M, Shrestha, L, Szklarz, M, Tallant, C, Newman, J.A, Cooper, C.D, Shrestha, B, Tumber, A, Cocking, R, Salah, E, von Delft, F, Arrowsmith, C, Edwards, A.M, Bountra, C, Knapp, S.
Deposit date:2014-02-28
Release date:2014-03-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of Pkn2
To be Published
1LEE
DownloadVisualize
BU of 1lee by Molmil
CRYSTAL STRUCTURE OF PLASMEPSIN FROM P. FALCIPARUM IN COMPLEX WITH INHIBITOR RS367
Descriptor: 4-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE, Plasmepsin 2
Authors:Asojo, O.A, Afonina, E, Gulnik, S.V, Yu, B, Erickson, J.W, Randad, R, Mehadjed, D, Silva, A.M.
Deposit date:2002-04-09
Release date:2002-10-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Ser205 mutant plasmepsin II from Plasmodium falciparum at 1.8 A in complex with the inhibitors rs367 and rs370.
Acta Crystallogr.,Sect.D, 58, 2002
4EU7
DownloadVisualize
BU of 4eu7 by Molmil
Succinyl-CoA:acetate CoA-transferase (AarCH6) in complex with CoA and citrate
Descriptor: CHLORIDE ION, CITRIC ACID, COENZYME A, ...
Authors:Mullins, E.A, Kappock, T.J.
Deposit date:2012-04-25
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
4EU4
DownloadVisualize
BU of 4eu4 by Molmil
Succinyl-CoA: acetate CoA-transferase (AarCH6) in complex with CoA (hexagonal lattice)
Descriptor: CHLORIDE ION, COENZYME A, SULFATE ION, ...
Authors:Mullins, E.A, Kappock, T.J.
Deposit date:2012-04-25
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases.
Biochemistry, 51, 2012
1L6X
DownloadVisualize
BU of 1l6x by Molmil
FC FRAGMENT OF RITUXIMAB BOUND TO A MINIMIZED VERSION OF THE B-DOMAIN FROM PROTEIN A CALLED Z34C
Descriptor: IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION, Minimized B-domain of Protein A Z34C, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Idusogie, E.E, Presta, L.G, Santoro-Gazzano, H, Totpal, K, Wong, P.Y, Ultsch, M, Meng, Y.G, Mullkerrin, M.G.
Deposit date:2002-03-14
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mapping of the C1q binding site on rituxan, a chimeric antibody with a human IgG1 Fc.
J.Immunol., 164, 2000
1LQG
DownloadVisualize
BU of 1lqg by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
Descriptor: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
Authors:Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
Deposit date:2002-05-10
Release date:2002-11-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
1KI4
DownloadVisualize
BU of 1ki4 by Molmil
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH 5-BROMOTHIENYLDEOXYURIDINE
Descriptor: 5-BROMOTHIENYLDEOXYURIDINE, SULFATE ION, THYMIDINE KINASE
Authors:Champness, J.N, Bennett, M.S, Wien, F, Visse, R, Summers, W.C, Sanderson, M.R.
Deposit date:1998-05-18
Release date:1998-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998
1LQJ
DownloadVisualize
BU of 1lqj by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE
Descriptor: URACIL-DNA GLYCOSYLASE
Authors:Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Varshney, U, Vijayan, M.
Deposit date:2002-05-10
Release date:2002-11-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
4D0R
DownloadVisualize
BU of 4d0r by Molmil
Mtb InhA complex with Pyradizinone compound 1
Descriptor: 4-(4-chlorophenoxy)-6-oxo-1-phenyl-1,6-dihydropyridazine-3-carboxamide, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Lange, S.
Deposit date:2014-04-29
Release date:2015-05-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Pyridazinones: A Novel Scaffold with Excellent Physicochemical Properties and Safety Profile for a Clinically Validated Target of Mycobacterium Tuberculosis
To be Published
1LQC
DownloadVisualize
BU of 1lqc by Molmil
LAC REPRESSOR HEADPIECE (RESIDUES 1-56), NMR, 32 STRUCTURES
Descriptor: LAC REPRESSOR
Authors:Slijper, M, Bonvin, A.M.J.J, Boelens, R, Kaptein, R.
Deposit date:1996-08-13
Release date:1997-02-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data: change of tertiary structure upon binding to the lac operator.
J.Mol.Biol., 259, 1996
4CK0
DownloadVisualize
BU of 4ck0 by Molmil
Crystal structure of the integral membrane diacylglycerol kinase - form 2
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, DIACYLGLYCEROL KINASE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Li, D, Lyons, J.A, Vogeley, L, Aragao, D, Caffrey, M.
Deposit date:2013-12-23
Release date:2015-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.924 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase with Zn-Amppcp Bound and its Catalytic Mechanism
To be Published
1LF2
DownloadVisualize
BU of 1lf2 by Molmil
CRYSTAL STRUCTURE OF PLASMEPSIN II FROM P FALCIPARUM IN COMPLEX WITH INHIBITOR RS370
Descriptor: 3-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE, Plasmepsin 2
Authors:Asojo, O.A, Afonina, E, Gulnik, S.V, Yu, B, Erickson, J.W, Randad, R, Mehadjed, D, Silva, A.M.
Deposit date:2002-04-10
Release date:2002-10-10
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Ser205 mutant plasmepsin II from Plasmodium falciparum at 1.8 A in complex with the inhibitors rs367 and rs370.
Acta Crystallogr.,Sect.D, 58, 2002

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon