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6KPM
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BU of 6kpm by Molmil
Crystal Structure of endo-beta-N-acetylglucosaminidase from Cordyceps militaris in complex with L-fucose
Descriptor: Chitinase, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
Authors:Seki, H, Arakawa, T, Yamada, C, Takegawa, K, Fushinobu, S.
Deposit date:2019-08-15
Release date:2019-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the specific cleavage of core-fucosylatedN-glycans by endo-beta-N-acetylglucosaminidase from the fungusCordyceps militaris.
J.Biol.Chem., 294, 2019
6KPL
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BU of 6kpl by Molmil
Crystal Structure of endo-beta-N-acetylglucosaminidase from Cordyceps militaris in apo form
Descriptor: Chitinase, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
Authors:Seki, H, Arakawa, T, Yamada, C, Takegawa, K, Fushinobu, S.
Deposit date:2019-08-15
Release date:2019-10-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for the specific cleavage of core-fucosylatedN-glycans by endo-beta-N-acetylglucosaminidase from the fungusCordyceps militaris.
J.Biol.Chem., 294, 2019
4P58
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BU of 4p58 by Molmil
Crystal structure of mouse comt bound to an inhibitor
Descriptor: 1',3'-dimethyl-1H,1'H-3,4'-bipyrazole, Catechol O-methyltransferase
Authors:Lanier, M.
Deposit date:2014-03-15
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:A fragment-based approach to identifying S-adenosyl-l-methionine -competitive inhibitors of catechol O-methyl transferase (COMT).
J.Med.Chem., 57, 2014
4IBM
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BU of 4ibm by Molmil
Crystal structure of insulin receptor kinase domain in complex with an inhibitor Irfin-1
Descriptor: 5-(2-phenylpyrazolo[1,5-a]pyridin-3-yl)-3H-pyrazolo[3,4-c]pyridazin-3-one, Insulin receptor
Authors:Wu, J, Anastassiadis, T, Duong-Ly, K.C, Peterson, J.R.
Deposit date:2012-12-08
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A highly selective dual insulin receptor (IR)/insulin-like growth factor 1 receptor (IGF-1R) inhibitor derived from an extracellular signal-regulated kinase (ERK) inhibitor.
J.Biol.Chem., 288, 2013
1GD0
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BU of 1gd0 by Molmil
HUMAN MACROPHAGE MIGRATION INHIBITORY FACTOR (MIF)
Descriptor: CITRIC ACID, MACROPHAGE MIGRATION INHIBITORY FACTOR, SULFATE ION
Authors:Kurihara, H, Katayama, N.
Deposit date:2000-08-24
Release date:2001-02-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Coumarin and chromen-4-one analogues as tautomerase inhibitors of macrophage migration inhibitory factor: discovery and X-ray crystallography.
J.Med.Chem., 44, 2001
6BUV
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BU of 6buv by Molmil
Structure of Mycobacterium tuberculosis NadD in complex with inhibitor [(1~{R},2~{R},5~{S})-5-methyl-2-propan-2-yl-cyclohexyl] 2-[3-methyl-2-(phenoxymethyl)benzimidazol-1-yl]ethanoate
Descriptor: 1-methyl-3-(2-{[(1R,2R,5S)-5-methyl-2-(propan-2-yl)cyclohexyl]oxy}-2-oxoethyl)-2-(phenoxymethyl)-1H-1,3-benzimidazol-3-ium, CHLORIDE ION, SODIUM ION, ...
Authors:Rodionova, I.A, Reed, R.W, Sorci, L, Osterman, A.L, Korotkov, K.V.
Deposit date:2017-12-11
Release date:2018-12-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Novel Antimycobacterial Compounds Suppress NAD Biogenesis by Targeting a Unique Pocket of NaMN Adenylyltransferase.
Acs Chem.Biol., 14, 2019
4OEO
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BU of 4oeo by Molmil
High resolution crystal structure of the unliganded ZO-1 PDZ1 domain
Descriptor: ACETATE ION, DODECAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Nomme, J, Lavie, A.
Deposit date:2014-01-13
Release date:2015-01-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of a Key Factor Regulating the Affinity between the Zonula Occludens First PDZ Domain and Claudins.
J.Biol.Chem., 290, 2015
7BAY
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BU of 7bay by Molmil
Crystal structure of CbpF from Streptococcus pneumoniae complexed with a Ytterbium derivative
Descriptor: CHOLINE ION, Choline-binding protein F, GLYCEROL, ...
Authors:Martinez Caballero, S, Hermoso, J.A.
Deposit date:2020-12-16
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:First Lanthanide Complex for De Novo Phasing in Native Protein Crystallography at 1 angstrom Radiation
Acs Appl Bio Mater, 4, 2021
2FPF
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BU of 2fpf by Molmil
Crystal structure of the ib1 sh3 dimer at low resolution
Descriptor: C-jun-amino-terminal kinase interacting protein 1
Authors:Kristensen, O, Dar, I, Gajhede, M.
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:A unique set of SH3-SH3 interactions controls IB1 homodimerization
Embo J., 25, 2006
2FPD
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BU of 2fpd by Molmil
Sad structure determination: crystal structure of the intrinsic dimerization sh3 domain of the ib1 scaffold protein
Descriptor: C-jun-amino-terminal kinase interacting protein 1, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Kristensen, O, Dar, I, Gajhede, M.
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A unique set of SH3-SH3 interactions controls IB1 homodimerization
Embo J., 25, 2006
2FPE
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BU of 2fpe by Molmil
Conserved dimerization of the ib1 src-homology 3 domain
Descriptor: C-jun-amino-terminal kinase interacting protein 1, HEXAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Guenat, S, Dar, I, Bonny, C, Kastrup, J.S, Gajhede, M, Kristensen, O.
Deposit date:2006-01-16
Release date:2006-02-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A unique set of SH3-SH3 interactions controls IB1 homodimerization
Embo J., 25, 2006
4TS6
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BU of 4ts6 by Molmil
Crystal structure of the RIM C2A domain from Drosophila.
Descriptor: GLYCEROL, Rab3 interacting molecule variant 2
Authors:Hatzopoulos, G.N, Shiroma, J, Vakonakis, I.
Deposit date:2014-06-18
Release date:2015-07-01
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The human cognition-enhancing CORD7 mutation increases active zone number and synaptic release.
Brain, 145, 2022
4JBS
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BU of 4jbs by Molmil
Crystal structure of the human Endoplasmic Reticulum Aminopeptidase 2 in complex with PHOSPHINIC PSEUDOTRIPEPTIDE inhibitor.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 2, ...
Authors:Saridakis, E, Birtley, J, Stratikos, E, Mavridis, I.M.
Deposit date:2013-02-20
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.789 Å)
Cite:Rationally designed inhibitor targeting antigen-trimming aminopeptidases enhances antigen presentation and cytotoxic T-cell responses.
Proc.Natl.Acad.Sci.USA, 110, 2013
3UMW
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BU of 3umw by Molmil
Crystal structure of Pim1 kinase in complex with inhibitor (Z)-2-[(1H-indazol-3-yl)methylene]-6-methoxy-7-(piperazin-1-ylmethyl)benzofuran-3(2H)-one
Descriptor: (2Z)-2-(1H-indazol-3-ylmethylidene)-6-methoxy-7-(piperazin-1-ylmethyl)-1-benzofuran-3(2H)-one, GLYCEROL, Proto-oncogene serine/threonine-protein kinase pim-1, ...
Authors:Parker, L.J, Handa, N, Yokoyama, S.
Deposit date:2011-11-14
Release date:2012-10-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Rational evolution of a novel type of potent and selective proviral integration site in Moloney murine leukemia virus kinase 1 (PIM1) inhibitor from a screening-hit compound.
J.Med.Chem., 55, 2012
2RNQ
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BU of 2rnq by Molmil
Solution structure of the C-terminal acidic domain of TFIIE alpha
Descriptor: Transcription initiation factor IIE subunit alpha
Authors:Okuda, M, Nishimura, Y.
Deposit date:2008-01-31
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insight into the TFIIE-TFIIH interaction: TFIIE and p53 share the binding region on TFIIH
Embo J., 27, 2008
7C7V
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BU of 7c7v by Molmil
Vitamin D3 receptor/lithochoric acid derivative complex
Descriptor: (4R)-4-[(3R,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Masuno, H, Numoto, N, Kagechika, H, Ito, N.
Deposit date:2020-05-26
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
7C3N
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BU of 7c3n by Molmil
Crystal structure of JAK3 in complex with Delgocitinib
Descriptor: 3-[(3S,4R)-3-methyl-7-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1,7-diazaspiro[3.4]octan-1-yl]-3-oxidanylidene-propanenitrile, Tyrosine-protein kinase JAK3
Authors:Doi, S, Otira, T, Kikuwaka, M, Nomura, A, Noji, S, Adachi, T.
Deposit date:2020-05-13
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Discovery of a Janus Kinase Inhibitor Bearing a Highly Three-Dimensional Spiro Scaffold: JTE-052 (Delgocitinib) as a New Dermatological Agent to Treat Inflammatory Skin Disorders.
J.Med.Chem., 63, 2020
7WKI
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BU of 7wki by Molmil
Structure of the ultra-affinity complex between CFH and a nanobody
Descriptor: Anti-CFH nanobody (VHH), Complement factor H
Authors:Caaveiro, J.M.M, Yokoo, T, Tsumoto, K.
Deposit date:2022-01-10
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Antibody recognition of complement factor H reveals a flexible loop involved in atypical hemolytic uremic syndrome pathogenesis.
J.Biol.Chem., 298, 2022
7C7W
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BU of 7c7w by Molmil
Vitamin D3 receptor/lithochoric acid derivative complex
Descriptor: (4R)-4-[(3S,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Masuno, H, Numoto, N, Kagechika, H, Ito, N.
Deposit date:2020-05-26
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
7WU8
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BU of 7wu8 by Molmil
Crystal structure of Harmonin-homology domain 2 (HHD2) of human RTEL1
Descriptor: Regulator of telomere elongation helicase 1
Authors:Kumar, N, Rothweiler, U, Singh, M.
Deposit date:2022-02-07
Release date:2023-08-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Harmonin homology domain-mediated interaction of RTEL1 helicase with RPA and DNA provides insights into its recruitment to DNA repair sites.
Nucleic Acids Res., 52, 2024
7DDW
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BU of 7ddw by Molmil
Crystal structure of a mutant Staphylococcus equorum manganese superoxide dismutase S126C
Descriptor: MANGANESE (II) ION, Superoxide dismutase
Authors:Retnoningrum, D.S, Yoshida, H, Razani, M.D, Meidianto, V.F, Hartanto, A, Artarini, A, Ismaya, W.T.
Deposit date:2020-10-30
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The role of S126 in the Staphylococcus equorum MnSOD activity and stability.
J.Struct.Biol., 213, 2021
7NCJ
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BU of 7ncj by Molmil
Type 2AB alpha-synuclein filament seeded in vitro by filaments purified from Multiple Systems Atrophy Case 1
Descriptor: Alpha-synuclein
Authors:Lovestam, S.K.A, Schweighauser, M, Scheres, S.H.W.
Deposit date:2021-01-28
Release date:2021-02-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Seeded assembly in vitro does not replicate the structures of alpha-synuclein filaments from multiple system atrophy.
Febs Open Bio, 11, 2021
7NCG
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BU of 7ncg by Molmil
Type 2A alpha-synuclein filament seeded in vitro by filaments purified from Multiple Systems Atrophy Case 2
Descriptor: Alpha-synuclein
Authors:Lovestam, S.K.A, Schweighauser, M, Scheres, S.H.W.
Deposit date:2021-01-28
Release date:2021-02-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Seeded assembly in vitro does not replicate the structures of alpha-synuclein filaments from multiple system atrophy.
Febs Open Bio, 11, 2021
7NCI
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BU of 7nci by Molmil
Type 2B alpha-synuclein filament seeded in vitro by filaments purified from Multiple Systems Atrophy Case 1
Descriptor: Alpha-synuclein
Authors:Lovestam, S.K.A, Schweighauser, M, Scheres, S.H.W.
Deposit date:2021-01-28
Release date:2021-02-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Seeded assembly in vitro does not replicate the structures of alpha-synuclein filaments from multiple system atrophy.
Febs Open Bio, 11, 2021
7NCH
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BU of 7nch by Molmil
Type 1B alpha-synuclein filament seeded in vitro by filaments purified from Multiple Systems Atrophy Case 1
Descriptor: Alpha-synuclein
Authors:Lovestam, S.K.A, Schweighauser, M, Scheres, S.H.W.
Deposit date:2021-01-28
Release date:2021-02-24
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Seeded assembly in vitro does not replicate the structures of alpha-synuclein filaments from multiple system atrophy.
Febs Open Bio, 11, 2021

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