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6VFA
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BU of 6vfa by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
To be published
6VFB
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BU of 6vfb by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
To be published
6VFC
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BU of 6vfc by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
To be published
7M49
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BU of 7m49 by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Reaction State Ternary Complex, 5 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4B
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BU of 7m4b by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Product State Ternary Complex, 60 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4H
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BU of 7m4h by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Reaction State Ternary Complex, 225 min
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M47
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BU of 7m47 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 60 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M43
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BU of 7m43 by Molmil
DNA Polymerase Lambda, TTP:At Ca2+ Ground State Ternary Complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4F
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BU of 7m4f by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Product State Ternary Complex, 300 min
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4J
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BU of 7m4j by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Product State Ternary Complex, 960 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.377 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4A
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BU of 7m4a by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Product State Ternary Complex, 20 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.868 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4E
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BU of 7m4e by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Reaction State Ternary Complex, 120 min
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M45
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BU of 7m45 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Reaction State Ternary Complex, 120 sec
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4C
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BU of 7m4c by Molmil
DNA Polymerase Lambda, TTP:At Mn2+ Product State Ternary Complex, 960 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4K
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BU of 7m4k by Molmil
DNA Polymerase Lambda, TTPaS:At Ca2+ Ground State Ternary Complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M44
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BU of 7m44 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Reaction State Ternary Complex, 90 sec
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M46
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BU of 7m46 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 5 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4G
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BU of 7m4g by Molmil
DNA Polymerase Lambda, dCTP:At Mg2+ Product State Ternary Complex, 960 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4I
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BU of 7m4i by Molmil
DNA Polymerase Lambda, dCTP:At Mn2+ Product State Ternary Complex, 420 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M4D
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BU of 7m4d by Molmil
DNA Polymerase Lambda, dCTP:At Ca2+ Ground State Ternary Complex
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.817 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
7M48
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BU of 7m48 by Molmil
DNA Polymerase Lambda, TTP:At Mg2+ Product State Ternary Complex, 960 min
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2021-03-21
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Watching right and wrong nucleotide insertion captures hidden polymerase fidelity checkpoints.
Nat Commun, 13, 2022
6W2M
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BU of 6w2m by Molmil
Abortive ternary complex crystal structure of DNA polymerase Beta with 8OG-dC base pair at the primer terminus and flipped out dA
Descriptor: CHLORIDE ION, DNA polymerase beta, Downstream Primer Strand, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2020-03-06
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structure of a DNA polymerase abortive complex with the 8OG:dA base pair at the primer terminus.
Commun Biol, 3, 2020
5BOL
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BU of 5bol by Molmil
DNA polymerase beta ternary complex with a templating 5ClC and incoming dGTP analog
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-05-27
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.981 Å)
Cite:Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
5BPC
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BU of 5bpc by Molmil
DNA polymerase beta ternary complex with a templating 5ClC and incoming dATP analog
Descriptor: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-05-28
Release date:2015-08-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
5BOM
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BU of 5bom by Molmil
DNA polymerase beta binary complex with a templating 5ClC
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*(4U3)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-05-27
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.0002 Å)
Cite:Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015

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PDB entries from 2024-06-26

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