Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8ITY
DownloadVisualize
BU of 8ity by Molmil
human RNA polymerase III pre-initiation complex closed DNA 1
Descriptor: DNA (82-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y.
Deposit date:2023-03-23
Release date:2023-06-07
Last modified:2023-07-12
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the SNAPc-bound RNA polymerase III preinitiation complex.
Cell Res., 33, 2023
4N4H
DownloadVisualize
BU of 4n4h by Molmil
Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha in complex with histone H3.1K36me3
Descriptor: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Peptide from Histone H3.1, ...
Authors:Li, Y, Ren, Y, Li, H.
Deposit date:2013-10-08
Release date:2014-03-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
Nature, 508, 2014
7YCX
DownloadVisualize
BU of 7ycx by Molmil
The structure of INTAC-PEC complex
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1,DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zheng, H, Jin, Q, Wang, X, Qi, Y, Liu, W, Ren, Y, Zhao, D, Chen, F.X, Cheng, J, Chen, X, Xu, Y.
Deposit date:2022-07-02
Release date:2023-03-15
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Structural basis of INTAC-regulated transcription.
Protein Cell, 14, 2023
7V6G
DownloadVisualize
BU of 7v6g by Molmil
Structure of Candida albicans Fructose-1,6-bisphosphate aldolase mutation C157S with CN39
Descriptor: 1,2-ETHANEDIOL, Fructose-bisphosphate aldolase, ZINC ION, ...
Authors:Cao, H, Huang, Y, Chen, H, Wan, C, Ren, Y, Wan, J.
Deposit date:2021-08-20
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.343 Å)
Cite:Structure-Guided Discovery of the Novel Covalent Allosteric Site and Covalent Inhibitors of Fructose-1,6-Bisphosphate Aldolase to Overcome the Azole Resistance of Candidiasis.
J.Med.Chem., 65, 2022
7V6F
DownloadVisualize
BU of 7v6f by Molmil
Structure of Candida albicans Fructose-1,6-bisphosphate aldolase complexed with G3P
Descriptor: Fructose-bisphosphate aldolase, GLYCERALDEHYDE-3-PHOSPHATE, ZINC ION
Authors:Hongxuan, C, Huang, Y, Han, C, Chen, W, Ren, Y, Wan, J.
Deposit date:2021-08-20
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structure-Guided Discovery of the Novel Covalent Allosteric Site and Covalent Inhibitors of Fructose-1,6-Bisphosphate Aldolase to Overcome the Azole Resistance of Candidiasis.
J.Med.Chem., 65, 2022
7XI6
DownloadVisualize
BU of 7xi6 by Molmil
Crystal structure of C56 from pSSVi
Descriptor: C56
Authors:Zhang, Z.F, Ren, Y, Chen, Y.Y, Zhang, X.W, Dong, Y.H, Gong, Y, Cao, P, Huang, L.
Deposit date:2022-04-12
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization of the AbrB-like protein C56 conserved in a novel family of integrated genetic elements in Sulfolobales
To Be Published
7XZG
DownloadVisualize
BU of 7xzg by Molmil
High resolution crystal Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans complexed with NAD+
Descriptor: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Cao, H, Meng, J, Ren, Y, Wan, J.
Deposit date:2022-06-02
Release date:2023-06-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.879 Å)
Cite:High resolution crystal Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans complexed with NAD+
To Be Published
8IQ6
DownloadVisualize
BU of 8iq6 by Molmil
Cryo-EM structure of Latanoprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
Deposit date:2023-03-15
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
8IQ4
DownloadVisualize
BU of 8iq4 by Molmil
Cryo-EM structure of Carboprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
Deposit date:2023-03-15
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
7LUV
DownloadVisualize
BU of 7luv by Molmil
Cryo-EM structure of the yeast THO-Sub2 complex
Descriptor: ATP-dependent RNA helicase SUB2, THO complex subunit 2, THO complex subunit HPR1, ...
Authors:Xie, Y, Ren, Y.
Deposit date:2021-02-23
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the yeast TREX complex and coordination with the SR-like protein Gbp2.
Elife, 10, 2021
6ISU
DownloadVisualize
BU of 6isu by Molmil
Crystal structure of Lys27-linked di-ubiquitin in complex with its selective interacting protein UCHL3
Descriptor: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L3
Authors:Ding, S, Pan, M, Zheng, Q, Ren, Y, Hong, D.
Deposit date:2018-11-19
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.866 Å)
Cite:Chemical Protein Synthesis Enabled Mechanistic Studies on the Molecular Recognition of K27-linked Ubiquitin Chains.
Angew. Chem. Int. Ed. Engl., 58, 2019
7JV7
DownloadVisualize
BU of 7jv7 by Molmil
Crystal Structure of the yeast RNA Pol II CTD kinase CTDK-1 complex
Descriptor: CITRATE ANION, CTD kinase subunit alpha, CTD kinase subunit beta, ...
Authors:Xie, Y, Ren, Y.
Deposit date:2020-08-20
Release date:2021-01-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.850553 Å)
Cite:Structure and activation mechanism of the yeast RNA Pol II CTD kinase CTDK-1 complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
3J7W
DownloadVisualize
BU of 3j7w by Molmil
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Descriptor: Major capsid protein 10A
Authors:Guo, F, Liu, Z, Fang, P.A, Zhang, Q, Wright, E.T, Wu, W, Zhang, C, Vago, F, Ren, Y, Jakata, J, Chiu, W, Serwer, P, Jiang, W.
Deposit date:2014-08-12
Release date:2014-10-15
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions.
Proc.Natl.Acad.Sci.USA, 111, 2014
3J7X
DownloadVisualize
BU of 3j7x by Molmil
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Descriptor: Major capsid protein 10A
Authors:Guo, F, Liu, Z, Fang, P.A, Zhang, Q, Wright, E.T, Wu, W, Zhang, C, Vago, F, Ren, Y, Jakata, J, Chiu, W, Serwer, P, Jiang, W.
Deposit date:2014-08-12
Release date:2014-10-15
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions.
Proc.Natl.Acad.Sci.USA, 111, 2014
3J7V
DownloadVisualize
BU of 3j7v by Molmil
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Descriptor: Major capsid protein 10A
Authors:Guo, F, Liu, Z, Fang, P.A, Zhang, Q, Wright, E.T, Wu, W, Zhang, C, Vago, F, Ren, Y, Jakata, J, Chiu, W, Serwer, P, Jiang, W.
Deposit date:2014-08-12
Release date:2014-10-15
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions.
Proc.Natl.Acad.Sci.USA, 111, 2014
3FHN
DownloadVisualize
BU of 3fhn by Molmil
Structure of Tip20p
Descriptor: Protein transport protein TIP20
Authors:Tripathi, A, Ren, Y, Jeffrey, P.D, Hughson, F.M.
Deposit date:2008-12-09
Release date:2009-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural characterization of Tip20p and Dsl1p, subunits of the Dsl1p vesicle tethering complex.
Nat.Struct.Mol.Biol., 16, 2009
7KIR
DownloadVisualize
BU of 7kir by Molmil
Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant in complex with inositol (1,4)-bisphosphate
Descriptor: CALCIUM ION, D-MYO-INOSITOL-1,4-BISPHOSPHATE, Inositol polyphosphate 1-phosphatase
Authors:Dollins, D.E, Xiong, J.-P, Ren, Y, York, J.D.
Deposit date:2020-10-24
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A structural basis for lithium and substrate binding of an inositide phosphatase.
J.Biol.Chem., 296, 2020
7KIO
DownloadVisualize
BU of 7kio by Molmil
Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant
Descriptor: CALCIUM ION, Inositol polyphosphate 1-phosphatase, SULFATE ION
Authors:Xiong, J.-P, Dollins, D.E, Ren, Y, York, J.D.
Deposit date:2020-10-24
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A structural basis for lithium and substrate binding of an inositide phosphatase.
J.Biol.Chem., 296, 2020
1N4E
DownloadVisualize
BU of 1n4e by Molmil
Crystal Structure of a DNA Decamer Containing a Thymine-dimer
Descriptor: 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*TP*TP*AP*AP*TP*TP*CP*G)-3'
Authors:Park, H, Zhang, K, Ren, Y, Nadji, S, Sinha, N, Taylor, J.-S, Kang, C.
Deposit date:2002-10-30
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a DNA decamer containing a cis-syn thymine dimer.
Proc.Natl.Acad.Sci.USA, 99, 2002
1T4I
DownloadVisualize
BU of 1t4i by Molmil
Crystal Structure of a DNA Decamer Containing a Thymine-dimer
Descriptor: 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*TP*TP*AP*AP*TP*TP*CP*G)-3'
Authors:Park, H, Zhang, K, Ren, Y, Nadji, S, Sinha, N, Taylor, J.S, Kang, C.
Deposit date:2004-04-29
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a DNA Decamer Containing a cis-syn Thymine-dimer
Proc.Natl.Acad.Sci.USA, 99, 2002
1SM5
DownloadVisualize
BU of 1sm5 by Molmil
Crystal Structure of a DNA Decamer Containing a Thymine-dimer
Descriptor: 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3'
Authors:Park, H, Zhang, K, Ren, Y, Nadji, S, Sinha, N, Taylor, J.-S, Kang, C.
Deposit date:2004-03-08
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a DNA Decamer Containing a Thymine-dimer
Proc.Natl.Acad.Sci.USA, 99, 2002
7DU2
DownloadVisualize
BU of 7du2 by Molmil
RNA polymerase III EC complex in post-translocation state
Descriptor: DNA (5'-D(P*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*T)-3'), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y.
Deposit date:2021-01-07
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structure of human RNA polymerase III elongation complex.
Cell Res., 31, 2021
6V8P
DownloadVisualize
BU of 6v8p by Molmil
Structure of DNA Polymerase Zeta (Apo)
Descriptor: DNA polymerase delta small subunit, DNA polymerase delta subunit 3, DNA polymerase zeta catalytic subunit, ...
Authors:Malik, R, Gomez-Llorente, Y, Ubarretxena-Belandia, I, Aggarwal, A.K.
Deposit date:2019-12-11
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure and mechanism of B-family DNA polymerase zeta specialized for translesion DNA synthesis.
Nat.Struct.Mol.Biol., 27, 2020
6MRC
DownloadVisualize
BU of 6mrc by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 football complex
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
Deposit date:2018-10-12
Release date:2020-04-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020
6MRD
DownloadVisualize
BU of 6mrd by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 half-football complex
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
Deposit date:2018-10-12
Release date:2020-04-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon