Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5F98
DownloadVisualize
BU of 5f98 by Molmil
Crystal structure of RIG-I in complex with Cap-0 RNA
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX58, ...
Authors:Wang, C, Marcotrigiano, J, Miller, M, Jiang, F.
Deposit date:2015-12-09
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structural basis for m7G recognition and 2'-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I.
Proc.Natl.Acad.Sci.USA, 113, 2016
6JJ6
DownloadVisualize
BU of 6jj6 by Molmil
BRD4 in complex with 500
Descriptor: 1-methyl-6-(3-(4-methylpiperazine-1-carbonyl)benzyl)-1,2a1,5a,6-tetrahydro-2H-pyrido[3',2':6,7]azepino[4,3,2-cd]isoindol-2-one, Bromodomain-containing protein 4
Authors:Xu, J, Chen, Y, Jiang, F, Zhu, J.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:BRD4 in complex with ZZM1
To Be Published
6JJ5
DownloadVisualize
BU of 6jj5 by Molmil
BRD4 in complex with 259
Descriptor: 3-((1-methyl-2-oxo-1,2,2a1,5a-tetrahydro-6H-pyrido[3',2':6,7]azepino[4,3,2-cd]isoindol-6-yl)methyl)benzamide, Bromodomain-containing protein 4
Authors:Xu, J, Chen, Y, Jiang, F, Zhu, J.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:BRD4 in complex with ZZM1
To Be Published
5GGZ
DownloadVisualize
BU of 5ggz by Molmil
Crystal structure of novel inhibitor bound with Hsp90
Descriptor: Heat shock protein HSP 90-alpha, [2,4-bis(oxidanyl)-5-propan-2-yl-phenyl]-(2-ethoxy-7,8-dihydro-5~{H}-pyrido[4,3-d]pyrimidin-6-yl)methanone
Authors:Chen, T.T, Li, J, Xu, Y.C.
Deposit date:2016-06-16
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Novel Tetrahydropyrido[4,3-d]pyrimidines as Potent Inhibitors of Chaperone Heat Shock Protein 90
J. Med. Chem., 59, 2016
8WRM
DownloadVisualize
BU of 8wrm by Molmil
XBB.1.5 spike protein in complex with ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-15
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.34 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WRO
DownloadVisualize
BU of 8wro by Molmil
XBB.1.5.10 spike protein in complex with ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike glycoprotein,Spike glycoprotein,Spike glycoprotein,Fusion protein
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-15
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WTJ
DownloadVisualize
BU of 8wtj by Molmil
XBB.1.5.70 spike protein in complex with ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-18
Release date:2023-12-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.64 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WTD
DownloadVisualize
BU of 8wtd by Molmil
XBB.1.5.10 RBD in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S2'
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-18
Release date:2023-12-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WRH
DownloadVisualize
BU of 8wrh by Molmil
SARS-CoV-2 XBB.1.5.70 in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S2'
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-14
Release date:2023-11-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WRL
DownloadVisualize
BU of 8wrl by Molmil
XBB.1.5 RBD in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S1
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-15
Release date:2023-11-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
7YTO
DownloadVisualize
BU of 7yto by Molmil
The Crystal Structure Analysis of Creatine Amidinohydrolase from Alcaligenes sp. KS-85
Descriptor: Creatine amidinohydrolase
Authors:Chen, R.S.
Deposit date:2022-08-15
Release date:2023-08-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Creatinase: Using Increased Entropy to Improve the Activity and Thermostability.
J.Phys.Chem.B, 127, 2023
3MON
DownloadVisualize
BU of 3mon by Molmil
CRYSTAL STRUCTURES OF TWO INTENSELY SWEET PROTEINS
Descriptor: MONELLIN
Authors:Jiang, F, Tong, L, Kim, S.-H.
Deposit date:1992-08-26
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of two intensely sweet proteins.
Trends Biochem.Sci., 13, 1988
5ZVL
DownloadVisualize
BU of 5zvl by Molmil
Crystal Structure of Wheat Glutarredoxin
Descriptor: Glutaredoxin
Authors:Hu, S.Q, Sun, X.M, Chen, M.R.
Deposit date:2018-05-11
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.963 Å)
Cite:Crystal Structure of Wheat Glutaredoxin and Its Application in Improving the Processing Quality of Flour.
J. Agric. Food Chem., 66, 2018
4ZZH
DownloadVisualize
BU of 4zzh by Molmil
SIRT1/Activator Complex
Descriptor: (4S)-N-[3-(1,3-oxazol-5-yl)phenyl]-7-[3-(trifluoromethyl)phenyl]-3,4-dihydro-1,4-methanopyrido[2,3-b][1,4]diazepine-5(2H)-carboxamide, NAD-dependent protein deacetylase sirtuin-1, ZINC ION
Authors:Dai, H.
Deposit date:2015-05-22
Release date:2015-07-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1001 Å)
Cite:Crystallographic structure of a small molecule SIRT1 activator-enzyme complex.
Nat Commun, 6, 2015
4ZZI
DownloadVisualize
BU of 4zzi by Molmil
SIRT1/Activator/Inhibitor Complex
Descriptor: (3S)-1,3-dimethyl-N-[3-(1,3-oxazol-5-yl)phenyl]-6-[3-(trifluoromethyl)phenyl]-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide, 4-(4-{2-[(methylsulfonyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide, NAD-dependent protein deacetylase sirtuin-1, ...
Authors:Dai, H.
Deposit date:2015-05-22
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7346 Å)
Cite:Crystallographic structure of a small molecule SIRT1 activator-enzyme complex.
Nat Commun, 6, 2015
1GHD
DownloadVisualize
BU of 1ghd by Molmil
Crystal structure of the glutaryl-7-aminocephalosporanic acid acylase by mad phasing
Descriptor: GLUTARYL-7-AMINOCEPHALOSPORANIC ACID ACYLASE
Authors:Ding, Y, Jiang, W, Mao, X, He, H, Zhang, S, Tang, H, Bartlam, M, Ye, S, Jiang, F, Liu, Y, Zhao, G, Rao, Z.
Deposit date:2000-12-07
Release date:2003-07-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Affinity alkylation of the Trp-B4 residue of the beta -subunit of the glutaryl 7-aminocephalosporanic acid acylase of Pseudomonas sp. 130.
J.Biol.Chem., 277, 2002
4N5G
DownloadVisualize
BU of 4n5g by Molmil
Crystal Structure of RXRa LBD complexed with a synthetic modulator K8012
Descriptor: 5-(2-{(1Z)-5-fluoro-2-methyl-1-[4-(propan-2-yl)benzylidene]-1H-inden-3-yl}ethyl)-1H-tetrazole, Retinoic acid receptor RXR-alpha
Authors:Aleshin, A.E, Su, Y, Zhang, X, Liddington, R.C.
Deposit date:2013-10-09
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Sulindac-Derived RXR alpha Modulators Inhibit Cancer Cell Growth by Binding to a Novel Site.
Chem.Biol., 21, 2014
7M3U
DownloadVisualize
BU of 7m3u by Molmil
Solution NMR Structure of PawS-Derived Peptide PDP-24
Descriptor: PawS-Derived Peptide PDP-24
Authors:Payne, C.D, Rosengren, K.J.
Deposit date:2021-03-19
Release date:2021-03-31
Last modified:2022-04-13
Method:SOLUTION NMR
Cite:Solution NMR and racemic crystallography provide insights into a novel structural class of cyclic plant peptides.
Rsc Chem Biol, 2, 2021
7MMY
DownloadVisualize
BU of 7mmy by Molmil
Racemic structure of the cyclic plant peptide PDP-23
Descriptor: PDP-23
Authors:Vadlamani, G, Bond, C.S.
Deposit date:2021-04-30
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.464 Å)
Cite:Solution NMR and racemic crystallography provide insights into a novel structural class of cyclic plant peptides.
Rsc Chem Biol, 2, 2021
4ZZJ
DownloadVisualize
BU of 4zzj by Molmil
SIRT1/Activator/Substrate Complex
Descriptor: (3S)-1,3-dimethyl-N-[3-(1,3-oxazol-5-yl)phenyl]-6-[3-(trifluoromethyl)phenyl]-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide, Ac-p53, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Dai, H.
Deposit date:2015-05-22
Release date:2015-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7403 Å)
Cite:Crystallographic structure of a small molecule SIRT1 activator-enzyme complex.
Nat Commun, 6, 2015
7RB9
DownloadVisualize
BU of 7rb9 by Molmil
Cryo-EM structure of the rigor state Jordan myosin-15-F-actin complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Gong, R, Reynolds, M.J, Gurel, P, Alushin, G.M.
Deposit date:2021-07-05
Release date:2021-07-28
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for tunable control of actin dynamics by myosin-15 in mechanosensory stereocilia.
Sci Adv, 8, 2022
7R8V
DownloadVisualize
BU of 7r8v by Molmil
Cryo-EM structure of the ADP state actin filament
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Gong, R, Espinosa de los Reyes, S, Reynolds, M.J, Gurel, P, Alushin, G.M.
Deposit date:2021-06-27
Release date:2021-07-28
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis for tunable control of actin dynamics by myosin-15 in mechanosensory stereocilia.
Sci Adv, 8, 2022
7RB8
DownloadVisualize
BU of 7rb8 by Molmil
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Gong, R, Reynolds, M.J, Gurel, P, Alushin, G.M.
Deposit date:2021-07-05
Release date:2021-07-28
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Structural basis for tunable control of actin dynamics by myosin-15 in mechanosensory stereocilia.
Sci Adv, 8, 2022
7R91
DownloadVisualize
BU of 7r91 by Molmil
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Gong, R, Reynolds, M.J, Gurel, P, Alushin, G.M.
Deposit date:2021-06-28
Release date:2021-07-28
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis for tunable control of actin dynamics by myosin-15 in mechanosensory stereocilia.
Sci Adv, 8, 2022
7X31
DownloadVisualize
BU of 7x31 by Molmil
solution structure of an anti-CRISPR protein
Descriptor: Anti-CRISPR protein (AcrIIC1)
Authors:Zhao, Y, Yang, F.
Deposit date:2022-02-27
Release date:2022-10-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon