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7UUN
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BU of 7uun by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with neomycin
Descriptor: 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, NEOMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Osipiuk, J, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance.
Nat.Chem.Biol., 20, 2024
7UUK
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BU of 7uuk by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with tobramycin
Descriptor: Aminocyclitol acetyltransferase ApmA, CHLORIDE ION, TOBRAMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance.
Nat.Chem.Biol., 20, 2024
4RO3
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BU of 4ro3 by Molmil
1.8 Angstrom Crystal Structure of the N-terminal Domain of Protein with Unknown Function from Vibrio cholerae.
Descriptor: Hypothetical Protein, SULFATE ION
Authors:Minasov, G, Wawrzak, Z, Stogios, P.J, Skarina, T, Seed, K.D, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-10-27
Release date:2014-12-03
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 Angstrom Crystal Structure of the N-terminal Domain of Protein with Unknown Function from Vibrio cholerae.
To be Published
8DVC
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BU of 8dvc by Molmil
Receptor ShHTL5 from Striga hermonthica in complex with strigolactone agonist GR24
Descriptor: (3R,3aR,8bS)-3-({[(2R)-4-methyl-5-oxo-2,5-dihydrofuran-2-yl]oxy}methyl)-3,3a,4,8b-tetrahydro-2H-indeno[1,2-b]furan-2-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Arellano-Saab, A, Skarina, T, Yim, V, Savchenko, A, Stogios, P.J, McCourt, P.
Deposit date:2022-07-28
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.638 Å)
Cite:Structural analysis of a hormone-bound Striga strigolactone receptor.
Nat.Plants, 9, 2023
4WZ0
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BU of 4wz0 by Molmil
Crystal structure of U-box 1 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris
Descriptor: E3 ubiquitin-protein ligase LubX
Authors:Stogios, P.J, Quaile, A.T, Skarina, T, Stein, A, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-14
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
4XVH
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BU of 4xvh by Molmil
Crystal structure of a Corynascus thermopiles (Myceliophthora fergusii) carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Carbohydrate esterase family 2 (CE2), GLYCEROL
Authors:Stogios, P.J, Dong, A, Xu, X, Cui, H, Savchenko, A.
Deposit date:2015-01-27
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9449 Å)
Cite:Crystal structure of a Corynascus thermopiles carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
To Be Published
4W97
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BU of 4w97 by Molmil
Structure of ketosteroid transcriptional regulator KstR2 of Mycobacterium tuberculosis
Descriptor: CHLORIDE ION, HTH-type transcriptional repressor KstR2, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] 3-[(3aS,4S,7aS)-7a-methyl-1,5-bis(oxidanylidene)-2,3,3a,4,6,7-hexahydroinden-4-yl]propanethioate
Authors:Stogios, P.J, Evdokimova, E, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-27
Release date:2014-11-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Functional Characterization of a Ketosteroid Transcriptional Regulator of Mycobacterium tuberculosis.
J.Biol.Chem., 290, 2015
4WZ2
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BU of 4wz2 by Molmil
Crystal structure of U-box 2 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris, Ile175Met mutant
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase LubX, HEXANE-1,6-DIOL
Authors:Stogios, P.J, Qualie, A.T, Skarina, T, Nocek, B, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-28
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (3.408 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
4WZ3
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BU of 4wz3 by Molmil
Crystal structure of the complex between LubX/LegU2/Lpp2887 U-box 1 and Homo sapiens UBE2D2
Descriptor: E3 ubiquitin-protein ligase LubX, Ubiquitin-conjugating enzyme E2 D2
Authors:Stogios, P.J, Quaile, A.T, Skarina, T, Nocek, B, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
4XA9
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BU of 4xa9 by Molmil
Crystal structure of the complex between the N-terminal domain of RavJ and LegL1 from Legionella pneumophila str. Philadelphia
Descriptor: Gala protein type 1, 3 or 4, Uncharacterized protein
Authors:Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-13
Release date:2015-01-28
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
4XI1
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BU of 4xi1 by Molmil
Crystal structure of U-box 2 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris, wild-type
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase LubX, GLYCEROL, ...
Authors:Stogios, P.J, Quaile, T, Skarina, T, Cuff, M, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-01-06
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
5VRV
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BU of 5vrv by Molmil
2.05 Angstrom Resolution Crystal Structure of C-terminal Domain (DUF2156) of Putative Lysylphosphatidylglycerol Synthetase from Agrobacterium fabrum.
Descriptor: GLYCEROL, Protein regulated by acid pH, SULFATE ION
Authors:Minasov, G, Wawrzak, Z, Skarina, T, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-05-11
Release date:2017-05-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:2.05 Angstrom Resolution Crystal Structure of C-terminal Domain (DUF2156) of Putative Lysylphosphatidylglycerol Synthetase from Agrobacterium fabrum.
To Be Published
6U69
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BU of 6u69 by Molmil
Crystal structure of Yck2 from Candida albicans, apoenzyme
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-29
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2.
Cell Chem Biol, 27, 2020
6U6A
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BU of 6u6a by Molmil
Crystal structure of Yck2 from Candida albicans in complex with kinase inhibitor GW461484A
Descriptor: 2-(4-fluorophenyl)-6-methyl-3-(pyridin-4-yl)pyrazolo[1,5-a]pyridine, SULFATE ION, Serine/threonine protein kinase
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Chang, C, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-29
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2.
Cell Chem Biol, 27, 2020
7SNU
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BU of 7snu by Molmil
Crystal structure of ShHTL7 from Striga hermonthica in complex with strigolactone antagonist RG6
Descriptor: 2-{(2S)-1-[(4-ethoxyphenyl)methyl]-4-[(2E)-3-(4-methoxyphenyl)prop-2-en-1-yl]piperazin-2-yl}ethan-1-ol, ACETATE ION, GLYCEROL, ...
Authors:Arellano-Saab, A, Stogios, P.J, Skarina, T, Yim, V, Savchenko, A, McCourt, P.
Deposit date:2021-10-28
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:A novel strigolactone receptor antagonist provides insights into the structural inhibition, conditioning, and germination of the crop parasite Striga.
J.Biol.Chem., 298, 2022
6U8J
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BU of 6u8j by Molmil
Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
Descriptor: Phospho-2-dehydro-3-deoxyheptonate aldolase, UNKNOWN ATOM OR ION
Authors:Michalska, K, Evdokimova, E, Semper, C, Di Leo, R, Stogios, P.J, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-05
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
To Be Published
6U83
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BU of 6u83 by Molmil
OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-ALANINE, Outer membrane associated protein, ...
Authors:Michalska, K, Skarina, T, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-04
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3566 Å)
Cite:OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
6UVZ
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BU of 6uvz by Molmil
Amidohydrolase 2 from Bifidobacterium longum subsp. infantis
Descriptor: Amidohydrolase 2, CITRIC ACID, NONAETHYLENE GLYCOL
Authors:Chang, C, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2019-11-04
Release date:2020-02-26
Method:X-RAY DIFFRACTION (2.898 Å)
Cite:Amidohydrolase 2 from Bifidobacterium longum subsp. infantis
To Be Published
6UX3
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BU of 6ux3 by Molmil
Crystal structure of acetoin dehydrogenase from Enterobacter cloacae
Descriptor: Acetoin dehydrogenase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Chang, C, Skarina, T, Mesa, N, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-11-06
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Crystal structure of acetoin dehydrogenase from Enterobacter cloacae
To Be Published
6UXT
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BU of 6uxt by Molmil
Crystal structure of unknown function protein yfdX from Shigella flexneri
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
Authors:Chang, C, Skarina, T, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-11-08
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Crystal structure of unknown function protein yfdX from Shigella flexneri
To Be Published
7M92
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BU of 7m92 by Molmil
Crystal structure of unknown function protein protein B9J08_000055 Candida auris
Descriptor: Homoserine dehydrogenase
Authors:Chang, C, Evdokimova, E, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-03-30
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of unknown function protein protein B9J08_000055 Candida auris
To Be Published
7MH7
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BU of 7mh7 by Molmil
crystal structure of NAD kinase from Pseudomonas aeruginosa PAO1
Descriptor: NAD kinase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Chang, C, Evdokimova, E, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-04-14
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of NAD kinase from Pseudomonas aeruginosa
To Be Published
8EJU
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BU of 8eju by Molmil
The crystal structure of Pseudomonas putida PcaR
Descriptor: CHLORIDE ION, PHOSPHATE ION, Transcription regulatory protein (Pca regulon), ...
Authors:Pham, C, Skarina, T, Di Leo, R, Stogios, P.J, Mahadevan, R, Savchenko, A.
Deposit date:2022-09-19
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The crystal structure of Pseudomonas putida PcaR
To Be Published
8EJV
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BU of 8ejv by Molmil
The crystal structure of Pseudomonas putida PcaR in complex with succinate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Pham, C, Skarina, T, Di Leo, R, Stogios, P.J, Mahadevan, R, Savchenko, A.
Deposit date:2022-09-19
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:The crystal structure of Pseudomonas putida PcaR in complex with succinate
To Be Published
6XS4
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BU of 6xs4 by Molmil
Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Formate C-acetyltransferase
Authors:Valleau, D, Evdokimova, E, Stogios, P.J, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-14
Release date:2020-08-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae.
To Be Published

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PDB entries from 2024-05-29

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