6S8I
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![BU of 6s8i by Molmil](/molmil-images/mine/6s8i) | Structure of ZEBOV GP in complex with 3T0265 antibody | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Enveloped Glycoprotein 1, ... | Authors: | Diskin, R, Cohen-Dvashi, H. | Deposit date: | 2019-07-10 | Release date: | 2020-02-12 | Last modified: | 2020-07-29 | Method: | ELECTRON MICROSCOPY (2.99 Å) | Cite: | Structural Basis for a Convergent Immune Response against Ebola Virus. Cell Host Microbe, 27, 2020
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6S8D
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![BU of 6s8d by Molmil](/molmil-images/mine/6s8d) | Structure of ZEBOV GP in complex with 1T0227 antibody | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Heavy chain, ... | Authors: | Diskin, R, Cohen-Dvashi, H. | Deposit date: | 2019-07-09 | Release date: | 2020-02-12 | Last modified: | 2020-07-29 | Method: | ELECTRON MICROSCOPY (3.49 Å) | Cite: | Structural Basis for a Convergent Immune Response against Ebola Virus. Cell Host Microbe, 27, 2020
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4JDV
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![BU of 4jdv by Molmil](/molmil-images/mine/4jdv) | Crystal structure of germ-line precursor of NIH45-46 Fab | Descriptor: | Fab heavy chain, Fab light chain, GLYCEROL, ... | Authors: | Diskin, R, Scharf, L, Bjorkman, P.J. | Deposit date: | 2013-02-25 | Release date: | 2013-03-20 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural basis for HIV-1 gp120 recognition by a germ-line version of a broadly neutralizing antibody. Proc.Natl.Acad.Sci.USA, 110, 2013
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4GW4
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![BU of 4gw4 by Molmil](/molmil-images/mine/4gw4) | Crystal structure of 3BNC60 Fab with P61A mutation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC60 Fab Heavy-chain, 3BNC60 Fab Light-chain | Authors: | Diskin, R, Fu, B.Z, Bjorkman, P.J. | Deposit date: | 2012-08-31 | Release date: | 2013-04-17 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Somatic Mutations of the Immunoglobulin Framework Are Generally Required for Broad and Potent HIV-1 Neutralization. Cell(Cambridge,Mass.), 153, 2013
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8P4T
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![BU of 8p4t by Molmil](/molmil-images/mine/8p4t) | The spike complex of the Lujo Virus | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, ... | Authors: | Eilon-Ashkenazy, M, Diskin, R. | Deposit date: | 2023-05-23 | Release date: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (2.96 Å) | Cite: | The spike complex of the Lujo Virus To Be Published
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4ZJF
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![BU of 4zjf by Molmil](/molmil-images/mine/4zjf) | Crystal structure of GP1 - the receptor binding domain of Lassa virus | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein | Authors: | Cohen-Dvashi, H, Cohen, N, Israeli, H, Diskin, R. | Deposit date: | 2015-04-29 | Release date: | 2015-05-27 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.595 Å) | Cite: | Molecular Mechanism for LAMP1 Recognition by Lassa Virus. J.Virol., 89, 2015
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6GC2
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![BU of 6gc2 by Molmil](/molmil-images/mine/6gc2) | AbLIFT: Antibody stability and affinity optimization by computational design of the variable light-heavy chain interface | Descriptor: | Heavy chain, Light Chain | Authors: | Warszawski, S, Katz, A, Khmelnitsky, L, Ben Nissan, G, Javitt, G, Dym, O, Unger, T, Knop, O, Diskin, R, Albeck, S, Fass, D, Sharon, M, Fleishman, S.J. | Deposit date: | 2018-04-17 | Release date: | 2019-05-01 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Optimizing antibody affinity and stability by the automated design of the variable light-heavy chain interfaces. Plos Comput.Biol., 15, 2019
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6GJC
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![BU of 6gjc by Molmil](/molmil-images/mine/6gjc) | Structure of Mycobacterium tuberculosis Fatty Acid Synthase - I | Descriptor: | FLAVIN MONONUCLEOTIDE, Fatty acid synthase | Authors: | Elad, N, Baron, S, Shakked, Z, Zimhony, O, Diskin, R. | Deposit date: | 2018-05-16 | Release date: | 2018-09-05 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Structure of Type-I Mycobacterium tuberculosis fatty acid synthase at 3.3 angstrom resolution. Nat Commun, 9, 2018
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6GH8
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![BU of 6gh8 by Molmil](/molmil-images/mine/6gh8) | Crystal structure of GP1 domain of Lujo virus in complex with the first CUB domain of neuropilin-2 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Glycoprotein, ... | Authors: | Cohen-Dvashi, H, Kilimnik, I, Diskin, R. | Deposit date: | 2018-05-06 | Release date: | 2018-07-25 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.44 Å) | Cite: | Structural basis for receptor recognition by Lujo virus. Nat Microbiol, 3, 2018
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5NSJ
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![BU of 5nsj by Molmil](/molmil-images/mine/5nsj) | GP1 receptor-binding domain from Whitewater Arroyo mammarenavirus | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Pre-glycoprotein polyprotein GP complex, ... | Authors: | Shimon, A, Shani, O, Diskin, R. | Deposit date: | 2017-04-26 | Release date: | 2017-08-02 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.249 Å) | Cite: | Structural Basis for Receptor Selectivity by the Whitewater Arroyo Mammarenavirus. J. Mol. Biol., 429, 2017
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5NFF
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![BU of 5nff by Molmil](/molmil-images/mine/5nff) | Crystal structure of GP1 receptor binding domain from Morogoro virus | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ... | Authors: | Israeli, H, Cohen-Dvashi, H, Shulman, A, Shimon, A, Diskin, R. | Deposit date: | 2017-03-14 | Release date: | 2017-04-19 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.615 Å) | Cite: | Mapping of the Lassa virus LAMP1 binding site reveals unique determinants not shared by other old world arenaviruses. PLoS Pathog., 13, 2017
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5OMI
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![BU of 5omi by Molmil](/molmil-images/mine/5omi) | Crystal structure of GP2 from Lassa virus in a post fusion conformation | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Pre-glycoprotein polyprotein GP complex, ... | Authors: | Shulman, A, Diskin, R. | Deposit date: | 2017-07-31 | Release date: | 2018-08-29 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.56 Å) | Cite: | Variations in Core Packing of GP2 from Old World Mammarenaviruses in their Post-Fusion Conformations Affect Membrane-Fusion Efficiencies. J.Mol.Biol., 431, 2019
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6TM2
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![BU of 6tm2 by Molmil](/molmil-images/mine/6tm2) | Human MUC2 AAs 21-1397 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D. | Deposit date: | 2019-12-03 | Release date: | 2020-10-21 | Last modified: | 2020-11-11 | Method: | ELECTRON MICROSCOPY (2.95 Å) | Cite: | Assembly Mechanism of Mucin and von Willebrand Factor Polymers. Cell, 183, 2020
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4JDT
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![BU of 4jdt by Molmil](/molmil-images/mine/4jdt) | Crystal structure of chimeric germ-line precursor of NIH45-46 Fab in complex with gp120 of 93TH057 HIV-1 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, Fab light chain, ... | Authors: | Scharf, L, Diskin, R, Bjorkman, P.J. | Deposit date: | 2013-02-25 | Release date: | 2013-03-20 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3.26 Å) | Cite: | Structural basis for HIV-1 gp120 recognition by a germ-line version of a broadly neutralizing antibody. Proc.Natl.Acad.Sci.USA, 110, 2013
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7B0B
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![BU of 7b0b by Molmil](/molmil-images/mine/7b0b) | Fab HbnC3t1p1_C6 bound to SARS-CoV-2 RBD | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, IGK@ protein, ... | Authors: | Borenstein-Katz, A, Diskin, R. | Deposit date: | 2020-11-19 | Release date: | 2021-12-01 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.98 Å) | Cite: | Somatic hypermutation introduces bystander mutations that prepare SARS-CoV-2 antibodies for emerging variants. Immunity, 56, 2023
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7A5O
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![BU of 7a5o by Molmil](/molmil-images/mine/7a5o) | Human MUC2 AAs 21-1397 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D. | Deposit date: | 2020-08-21 | Release date: | 2020-10-21 | Last modified: | 2020-11-11 | Method: | ELECTRON MICROSCOPY (2.95 Å) | Cite: | Assembly Mechanism of Mucin and von Willebrand Factor Polymers. Cell, 183, 2020
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5FT2
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![BU of 5ft2 by Molmil](/molmil-images/mine/5ft2) | Sub-tomogram averaging of Lassa virus glycoprotein spike from virus- like particles at pH 5 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX | Authors: | Li, S, Zhaoyang, S, Pryce, R, Parsy, M.L, Fehling, S.K, Schlie, K, Siebert, C.A, Garten, W, Bowden, T.A, Strecker, T, Huiskonen, J.T. | Deposit date: | 2016-01-09 | Release date: | 2016-03-02 | Last modified: | 2020-07-29 | Method: | ELECTRON MICROSCOPY (16.4 Å) | Cite: | Acidic Ph-Induced Conformations and Lamp1 Binding of the Lassa Virus Glycoprotein Spike. Plos Pathog., 12, 2016
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6RBF
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![BU of 6rbf by Molmil](/molmil-images/mine/6rbf) | Mucin 2 D3 domain | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ... | Authors: | Javitt, G, Fass, D. | Deposit date: | 2019-04-10 | Release date: | 2019-08-14 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.704 Å) | Cite: | Intestinal Gel-Forming Mucins Polymerize by Disulfide-Mediated Dimerization of D3 Domains. J.Mol.Biol., 431, 2019
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5T87
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![BU of 5t87 by Molmil](/molmil-images/mine/5t87) | Crystal structure of CDI complex from Cupriavidus taiwanensis LMG 19424 | Descriptor: | CdiA toxin, CdiI immunity protein | Authors: | Michalska, K, Joachimiak, G, Jedrzejczak, R, Hayes, C.S, Goulding, C.W, Joachimiak, A, Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Midwest Center for Structural Genomics (MCSG) | Deposit date: | 2016-09-06 | Release date: | 2017-09-13 | Last modified: | 2019-12-25 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016). Proteins, 86 Suppl 1, 2018
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2VSD
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![BU of 2vsd by Molmil](/molmil-images/mine/2vsd) | crystal structure of CHIR-AB1 | Descriptor: | CHIR AB1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | Authors: | Arnon, T.I, Kaiser, J.T, Bjorkman, P.J. | Deposit date: | 2008-04-22 | Release date: | 2008-07-29 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | The Crystal Structure of Chir-Ab1: A Primordial Avian Classical Fc Receptor. J.Mol.Biol., 381, 2008
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6TM6
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![BU of 6tm6 by Molmil](/molmil-images/mine/6tm6) | MUC2 CysD1 domain | Descriptor: | CALCIUM ION, Mucin-2 | Authors: | Khmelnitsky, L, Fass, D. | Deposit date: | 2019-12-03 | Release date: | 2020-02-19 | Last modified: | 2021-03-03 | Method: | X-RAY DIFFRACTION (1.63 Å) | Cite: | Assembly Mechanism of Mucin and von Willebrand Factor Polymers. Cell, 183, 2020
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4JPW
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![BU of 4jpw by Molmil](/molmil-images/mine/4jpw) | Crystal structure of broadly and potently neutralizing antibody 12a21 in complex with hiv-1 strain 93th057 gp120 mutant | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEAVY CHAIN OF ANTIBODY 12A21, ... | Authors: | Acharya, P, Luongo, T, Zhou, T, Kwong, P.D. | Deposit date: | 2013-03-19 | Release date: | 2013-04-17 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.904 Å) | Cite: | Somatic mutations of the immunoglobulin framework are generally required for broad and potent HIV-1 neutralization. Cell(Cambridge,Mass.), 153, 2013
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4JPV
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![BU of 4jpv by Molmil](/molmil-images/mine/4jpv) | Crystal structure of broadly and potently neutralizing antibody 3bnc117 in complex with hiv-1 gp120 | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... | Authors: | Zhou, T, Moquin, S, Kwong, P.D. | Deposit date: | 2013-03-19 | Release date: | 2013-04-17 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.827 Å) | Cite: | Somatic Mutations of the Immunoglobulin Framework Are Generally Required for Broad and Potent HIV-1 Neutralization. Cell(Cambridge,Mass.), 153, 2013
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3OD6
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![BU of 3od6 by Molmil](/molmil-images/mine/3od6) | Crystal structure of p38alpha Y323T active mutant | Descriptor: | Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside | Authors: | Livnah, O, Tzarum, N. | Deposit date: | 2010-08-11 | Release date: | 2011-01-12 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.682 Å) | Cite: | Active mutants of the TCR-mediated p38alpha alternative activation site show changes in the phosphorylation lip and DEF site formation. J.Mol.Biol., 405, 2011
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3ODZ
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![BU of 3odz by Molmil](/molmil-images/mine/3odz) | Crystal structure of P38alpha Y323R active mutant | Descriptor: | Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside | Authors: | Livnah, O, Tzarum, N. | Deposit date: | 2010-08-12 | Release date: | 2011-01-12 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Active mutants of the TCR-mediated p38alpha alternative activation site show changes in the phosphorylation lip and DEF site formation. J.Mol.Biol., 405, 2011
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