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6W1M
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BU of 6w1m by Molmil
Cryo-EM structure of 5HT3A receptor in presence of Ondansetron
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(4-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, ...
Authors:Basak, S, Chakrapani, S.
Deposit date:2020-03-04
Release date:2021-01-13
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:High-resolution structures of multiple 5-HT 3A R-setron complexes reveal a novel mechanism of competitive inhibition.
Elife, 9, 2020
6W1Y
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BU of 6w1y by Molmil
Cryo-EM structure of 5HT3A receptor in presence of Palonosetron
Descriptor: (3~{a}~{S})-2-[(3~{S})-1-azabicyclo[2.2.2]octan-3-yl]-3~{a},4,5,6-tetrahydro-3~{H}-benzo[de]isoquinolin-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(4-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Basak, S, Chakrapani, S.
Deposit date:2020-03-04
Release date:2021-01-13
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:High-resolution structures of multiple 5-HT 3A R-setron complexes reveal a novel mechanism of competitive inhibition.
Elife, 9, 2020
6W1J
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BU of 6w1j by Molmil
Cryo-EM structure of 5HT3A receptor in presence of Alosetron
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(4-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, ...
Authors:Basak, S, Chakrapani, S.
Deposit date:2020-03-04
Release date:2021-01-13
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:High-resolution structures of multiple 5-HT 3A R-setron complexes reveal a novel mechanism of competitive inhibition.
Elife, 9, 2020
1BPY
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BU of 1bpy by Molmil
HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*DOC)-3'), ...
Authors:Sawaya, M.R, Pelletier, H, Prasad, R, Wilson, S.H, Kraut, J.
Deposit date:1997-04-15
Release date:1997-06-16
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism.
Biochemistry, 36, 1997
3BY7
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BU of 3by7 by Molmil
CRYSTAL STRUCTURE OF A PROTEIN STRUCTURALLY SIMILAR TO SM/LSM-LIKE RNA-BINDING PROTEINS (JCVI_PEP_1096686650277) FROM UNCULTURED MARINE ORGANISM AT 2.60 A RESOLUTION
Descriptor: uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-01-15
Release date:2008-01-29
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 A resolution.
Proteins, 75, 2009
3B77
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BU of 3b77 by Molmil
Crystal structure of a ph domain containing bacterial protein (exig_2160) from exiguobacterium sibiricum 255-15 at 2.42 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3DCX
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BU of 3dcx by Molmil
Crystal structure of a duf1696 family protein with a pleckstrin-homology domain (shew_0819) from shewanella loihica pv-4 at 2.00 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-06-04
Release date:2008-07-29
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3HBZ
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BU of 3hbz by Molmil
Crystal structure of a putative glycoside hydrolase (bt_2081) from bacteroides thetaiotaomicron vpi-5482 at 2.05 A resolution
Descriptor: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-05-05
Release date:2009-05-26
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 A resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
3BYQ
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BU of 3byq by Molmil
Crystal structure of a duf1185 family protein (bb2672) from bordetella bronchiseptica rb50 at 1.70 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, TETRAETHYLENE GLYCOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-01-16
Release date:2008-01-29
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
4BFH
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BU of 4bfh by Molmil
Crystal structure of alpha-amylase inhibitor wrightide R1 (wR1) peptide from Wrightia religiosa
Descriptor: WRIGHTIDE R1
Authors:Yap, L.J, Nguyen, P.Q.T, Tam, J.P, Lescar, J.
Deposit date:2013-03-19
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Discovery and Characterization of Pseudocyclic Cystine-Knot Alpha-Amylase Inhibitors with High Resistance to Heat and Proteolytic Degradation.
FEBS J., 281, 2014
6LEK
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BU of 6lek by Molmil
Tertiary structure of Barnacle cement protein MrCP20
Descriptor: Cement protein-20k
Authors:Mohanram, H.
Deposit date:2019-11-25
Release date:2020-01-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Three-dimensional structure of Megabalanus rosa Cement Protein 20 revealed by multi-dimensional NMR and molecular dynamics simulations.
Philos.Trans.R.Soc.Lond.B Biol.Sci., 374, 2019
3D00
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BU of 3d00 by Molmil
Crystal structure of a tungsten formylmethanofuran dehydrogenase subunit e (fmde)-like protein (syn_00638) from syntrophus aciditrophicus at 1.90 A resolution
Descriptor: CHLORIDE ION, Tungsten formylmethanofuran dehydrogenase subunit E, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-04-30
Release date:2008-05-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallogr.,Sect.F, 66, 2010
3CGH
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BU of 3cgh by Molmil
Crystal structure of a susd homolog (bt_3984) from bacteroides thetaiotaomicron vpi-5482 at 1.70 A resolution
Descriptor: ACETATE ION, SusD homolog, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-03-05
Release date:2008-03-18
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules.
Acta Crystallogr.,Sect.F, 66, 2010
3CM1
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BU of 3cm1 by Molmil
Crystal structure of SsgA-like sporulation-specific cell division protein (YP_290167.1) from Thermobifida fusca YX-ER1 at 2.60 A resolution
Descriptor: SsgA-like sporulation-specific cell division protein
Authors:Joint Center for Structural Genomics (JCSG), Chruszcz, M, Minor, W, Wang, S.
Deposit date:2008-03-20
Release date:2008-04-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes.
J.Biol.Chem., 284, 2009
3DUE
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BU of 3due by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE PERIPLASMIC PROTEIN FROM DUF2874 FAMILY (BVU_2987) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.85 A RESOLUTION
Descriptor: CACODYLATE ION, Putative periplasmic protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-07-17
Release date:2008-08-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.
Acta Crystallogr.,Sect.F, 66, 2010
3DEE
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BU of 3dee by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION
Descriptor: CHLORIDE ION, IMIDAZOLE, Putative regulatory protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-06-09
Release date:2008-08-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation.
Acta Crystallogr.,Sect.F, 66, 2010
3H50
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BU of 3h50 by Molmil
CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION
Descriptor: ACETATE ION, Tetracenomycin polyketide synthesis protein, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-21
Release date:2009-05-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.
Acta Crystallogr.,Sect.F, 66, 2010
2QTP
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BU of 2qtp by Molmil
Crystal structure of a duf1185 family protein (spo0826) from silicibacter pomeroyi dss-3 at 2.10 A resolution
Descriptor: Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
4QD3
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BU of 4qd3 by Molmil
Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with 5-azacytidine at 1.89 Angstrom resolution
Descriptor: 4-amino-1-(beta-D-ribofuranosyl)-1,3,5-triazin-2(1H)-one, GLYCEROL, Peptidyl-tRNA hydrolase
Authors:Singh, A, Gautam, L, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-05-13
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and binding studies of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa provide a platform for the structure-based inhibitor design against peptidyl-tRNA hydrolase
Biochem.J., 463, 2014
3BOS
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BU of 3bos by Molmil
Crystal structure of a putative dna replication regulator HDA (SAMA_1916) from Shewanella amazonensis sb2b at 1.75 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-12-17
Release date:2008-01-15
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A structural basis for the regulatory inactivation of DnaA.
J.Mol.Biol., 385, 2009
2Z78
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BU of 2z78 by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with BPH-806
Descriptor: 3-(decyloxy)-5-(3,5-difluorophenyl)-1-(2,2-diphosphonoethyl)pyridinium, Geranylgeranyl pyrophosphate synthetase
Authors:Chen, C.K.-M, Guo, R.T, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-08-16
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008
2Z4V
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BU of 2z4v by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and GGPP (inhibitory site)
Descriptor: GERANYLGERANYL DIPHOSPHATE, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Chen, C.K.-M, Guo, R.T, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-06-26
Release date:2008-07-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008
2Z52
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BU of 2z52 by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-23
Descriptor: (1-HYDROXYDODECANE-1,1-DIYL)BIS(PHOSPHONIC ACID), Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Chen, C.K.-M, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-06-26
Release date:2008-07-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008
2Z4X
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BU of 2z4x by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-252 (P21)
Descriptor: (1-HYDROXYNONANE-1,1-DIYL)BIS(PHOSPHONIC ACID), Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Chen, C.K.-M, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-06-26
Release date:2008-07-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008
2Z7I
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BU of 2z7i by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with inhibitor BPH-742
Descriptor: (2,2-DIPHOSPHONOETHYL)(DODECYL)DIMETHYLPHOSPHONIUM, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Chen, C.K.-M, Ko, T.-P, Cao, R, Hudock, M, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-08-23
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008

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