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8YSH
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BU of 8ysh by Molmil
MERS-CoV RBD in complex with nanobody Nb14
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nb14, Spike glycoprotein, ...
Authors:Wang, Y.X, Ma, S.
Deposit date:2024-03-23
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure defining of ultrapotent neutralizing nanobodies against MERS-CoV with novel epitopes on receptor binding domain.
Plos Pathog., 20, 2024
9BC6
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BU of 9bc6 by Molmil
HCN1 M305L with propofol
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2,6-BIS(1-METHYLETHYL)PHENOL, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Kim, E.D, Nimigean, C.M.
Deposit date:2024-04-07
Release date:2024-07-31
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Propofol rescues voltage-dependent gating of HCN1 channel epilepsy mutants.
Nature, 632, 2024
9BC7
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BU of 9bc7 by Molmil
HCN1 M305L holo
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Kim, E.D, Nimigean, C.M.
Deposit date:2024-04-08
Release date:2024-07-31
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Propofol rescues voltage-dependent gating of HCN1 channel epilepsy mutants.
Nature, 632, 2024
7YFK
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BU of 7yfk by Molmil
The structure of human pregnane X receptor in complex with an SRC-1 coactivator peptide and a limonoid compound, nomilin
Descriptor: Nomilin, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1
Authors:Xia, Y, Yao, D, Huang, C, Cao, Y.
Deposit date:2022-07-08
Release date:2023-06-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pregnane X receptor agonist nomilin extends lifespan and healthspan in preclinical models through detoxification functions.
Nat Commun, 14, 2023
7YKC
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BU of 7ykc by Molmil
crystal structure of the Phenylalanine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (ARO3) from Saccharomyces cerevisiae
Descriptor: 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
Authors:Liu, H, Luo, Y.
Deposit date:2022-07-22
Release date:2023-07-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanistic investigation of a D to N mutation in DAHP synthase that dictates carbon flux into the shikimate pathway in yeast.
Commun Chem, 6, 2023
5VSI
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BU of 5vsi by Molmil
CH1/Ckappa Fab mutant 15.1
Descriptor: 1,2-ETHANEDIOL, CH1/Ckappa Fab heavy chain, CH1/Ckappa Fab light chain, ...
Authors:Hendle, J.
Deposit date:2017-05-11
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Computational design of a specific heavy chain/ kappa light chain interface for expressing fully IgG bispecific antibodies.
Protein Sci., 26, 2017
5YB1
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BU of 5yb1 by Molmil
Structure and function of human serum albumin-metal agent complex
Descriptor: PALMITIC ACID, Serum albumin, ~{N},~{N},12-trimethyl-3$l^{3}-thia-1$l^{4},5,6$l^{4}-triaza-2$l^{3}-cupratricyclo[6.4.0.0^{2,6}]dodeca-1(8),3,6,9,11-pentaen-4-amine
Authors:Yang, F, Wang, T, Wang, J, Gou, Y, Zhang, Z.L.
Deposit date:2017-09-02
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.616 Å)
Cite:Developing an Anticancer Copper(II) Multitarget Pro-Drug Based on the His146 Residue in the IB Subdomain of Modified Human Serum Albumin.
Mol. Pharm., 15, 2018
5Z9J
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BU of 5z9j by Molmil
Identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative P450-like enzyme, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Lu, M, Lin, L, Zhang, C, Chen, Y.
Deposit date:2018-02-03
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Riboflavin Is Directly Involved in the N-Dealkylation Catalyzed by Bacterial Cytochrome P450 Monooxygenases.
Chembiochem, 2020
5VR9
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BU of 5vr9 by Molmil
CH1/Ckappa Fab based on Matuzumab
Descriptor: CH1/Ckappa Fab heavy chain, CH1/Ckappa Fab light chain
Authors:Hendle, J.
Deposit date:2017-05-10
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Computational design of a specific heavy chain/ kappa light chain interface for expressing fully IgG bispecific antibodies.
Protein Sci., 26, 2017
5VSH
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BU of 5vsh by Molmil
CH1/Clambda Fab based on Pertuzumab
Descriptor: CH1/Clambda Fab heavy chain, CH1/Clambda Fab light chain, SULFATE ION
Authors:Hendle, J.
Deposit date:2017-05-11
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Computational design of a specific heavy chain/ kappa light chain interface for expressing fully IgG bispecific antibodies.
Protein Sci., 26, 2017
5Z9I
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BU of 5z9i by Molmil
Identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative P450-like enzyme
Authors:Lu, M, Lin, L, Zhang, C, Chen, Y.
Deposit date:2018-02-03
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Riboflavin Is Directly Involved in the N-Dealkylation Catalyzed by Bacterial Cytochrome P450 Monooxygenases.
Chembiochem, 2020
8JHQ
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BU of 8jhq by Molmil
Cryo-EM structure of human S1P transporter SPNS2 bound with S1P
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Sphingosine-1-phosphate transporter SPNS2,GlgA glycogen synthase
Authors:Pang, B, Yu, L.Y, Ren, R.B.
Deposit date:2023-05-25
Release date:2024-01-10
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis of Spns2-facilitated sphingosine-1-phosphate transport.
Cell Res., 34, 2024
8JHR
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BU of 8jhr by Molmil
Cryo-EM structure of human S1P transporter SPNS2 bound with an inhibitor 16d
Descriptor: 3-[3-(4-decylphenyl)-1,2,4-oxadiazol-5-yl]propan-1-amine, Sphingosine-1-phosphate transporter SPNS2
Authors:Pang, B, Yu, L.Y, Ren, R.B.
Deposit date:2023-05-25
Release date:2024-01-10
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Molecular basis of Spns2-facilitated sphingosine-1-phosphate transport.
Cell Res., 34, 2024
7C17
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BU of 7c17 by Molmil
The cryo-EM structure of E. coli CueR transcription activation complex with fully duplex promoter DNA
Descriptor: DNA (72-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Fang, C.L, Zhang, Y.
Deposit date:2020-05-02
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:CueR activates transcription through a DNA distortion mechanism.
Nat.Chem.Biol., 17, 2021
8TIM
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BU of 8tim by Molmil
TRIOSE PHOSPHATE ISOMERASE
Descriptor: SULFATE ION, TRIOSE PHOSPHATE ISOMERASE
Authors:Artymiuk, P.J, Taylor, W.R, Phillips, D.C.
Deposit date:1998-08-25
Release date:1999-02-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Triose Phosphate Isomerase
To be Published
7VF9
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BU of 7vf9 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2021-09-10
Release date:2022-07-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7VF6
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BU of 7vf6 by Molmil
The crystal structure of PurZ0
Descriptor: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, ...
Authors:Tong, Y, Zhang, Y.
Deposit date:2021-09-10
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage.
Nat Microbiol, 8, 2023
7XHA
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BU of 7xha by Molmil
Structure of the SecA/SecYE/proOmpA(4Y)-sfGFP complex with ADP.BeF3-.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Dong, L, Li, L.
Deposit date:2022-04-07
Release date:2023-01-11
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural basis of SecA-mediated protein translocation.
Proc.Natl.Acad.Sci.USA, 120, 2023
7XHB
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BU of 7xhb by Molmil
Structure of the SecA/SecYE/proOmpA(4Y)-sfGFP complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein translocase subunit SecA, ...
Authors:Dong, L, Li, L.
Deposit date:2022-04-07
Release date:2023-01-11
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structural basis of SecA-mediated protein translocation.
Proc.Natl.Acad.Sci.USA, 120, 2023
7XL4
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BU of 7xl4 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7XL3
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BU of 7xl3 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
5GIY
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BU of 5giy by Molmil
HSA-Palmitic acid-[RuCl5(ind)]2-
Descriptor: PALMITIC ACID, Serum albumin, pentakis(chloranyl)-(1~{H}-indazol-2-ium-2-yl)ruthenium(1-)
Authors:Yang, F, Wang, T.
Deposit date:2016-06-25
Release date:2017-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.543 Å)
Cite:Structure of HSA-Palmitic acid-[RuCl5(ind)]2-
To Be Published
7YP9
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BU of 7yp9 by Molmil
Cryo-EM structure of Escherichia coli paused complex of transcription termination (TTC-pause)
Descriptor: DNA (31-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:You, L.L, Zhang, Y.
Deposit date:2022-08-03
Release date:2022-11-16
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural basis for intrinsic transcription termination.
Nature, 613, 2023
7YPA
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BU of 7ypa by Molmil
Cryo-EM structure of Escherichia coli hairpin-nucleation complex of transcription termination (TTC-hairpin)
Descriptor: DNA (31-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:You, L.L, Zhang, Y.
Deposit date:2022-08-03
Release date:2022-11-16
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural basis for intrinsic transcription termination.
Nature, 613, 2023
7YPB
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BU of 7ypb by Molmil
Cryo-EM structure of Escherichia coli release complex of transcription termination (TTC-release)
Descriptor: DNA (31-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:You, L.L, Zhang, Y.
Deposit date:2022-08-03
Release date:2022-11-16
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural basis for intrinsic transcription termination.
Nature, 613, 2023

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PDB entries from 2024-10-16

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