Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8A51
DownloadVisualize
BU of 8a51 by Molmil
Crystal structure of HSF2BP-BRME1 complex
Descriptor: 1,2-ETHANEDIOL, Break repair meiotic recombinase recruitment factor 1, CHLORIDE ION, ...
Authors:Miron, S, Legrand, P, Ropars, V, Ghouil, R, Zinn-Justin, S.
Deposit date:2022-06-13
Release date:2023-07-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:BRCA2-HSF2BP oligomeric ring disassembly by BRME1 promotes homologous recombination.
Sci Adv, 9, 2023
8GMO
DownloadVisualize
BU of 8gmo by Molmil
Bacteriophage T4 capsid shell containing 9DE insertions into the gp23* major capsid protein subunits
Descriptor: Mature capsid vertex protein, Mature major capsid protein
Authors:Fokine, A, Rao, V.B.
Deposit date:2023-03-26
Release date:2023-05-10
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Design of bacteriophage T4-based artificial viral vectors for human genome remodeling.
Nat Commun, 14, 2023
8B01
DownloadVisualize
BU of 8b01 by Molmil
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in a nanodisc
Descriptor: DECANE, DOCOSANE, HEXANE, ...
Authors:Davies, J.S, North, R.A, Dobson, R.C.J.
Deposit date:2022-09-06
Release date:2023-03-15
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter.
Nat Commun, 14, 2023
6NQD
DownloadVisualize
BU of 6nqd by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 G52K5 heavy chain, ...
Authors:Fang, Q, Rossmann, M.G.
Deposit date:2019-01-21
Release date:2019-03-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A sequestered fusion peptide in the structure of an HIV-1 transmitted founder envelope trimer.
Nat Commun, 10, 2019
5ZZ0
DownloadVisualize
BU of 5zz0 by Molmil
HUMAN GELSOLIN FROM RESIDUES GLU28 TO ARG161 WITH CALCIUM
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, Gelsolin
Authors:Sharma, P, Badmalia, M, Yadav, S.P.S, Singh, S.
Deposit date:2018-05-29
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.635 Å)
Cite:Bonsai Gelsolin Survives Heat Induced Denaturation by Forming beta-Amyloids which Leach Out Functional Monomer.
Sci Rep, 8, 2018
3ZMM
DownloadVisualize
BU of 3zmm by Molmil
Inhibitors of Jak2 Kinase domain
Descriptor: 5-FLUORO-4-[(1S)-1-(5-FLUOROPYRIMIDIN-2-YL)ETHOXY]-N-(5-METHYL-1H-PYRAZOL-3-YL)-6-MORPHOLINO-PYRIMIDIN-2-AMINE, ACETYL GROUP, TYROSINE-PROTEIN KINASE JAK2
Authors:Read, J, Green, I, Pollard, H, Howard, T, Mott, R.
Deposit date:2013-02-11
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery of Novel Jak2-Stat Pathway Inhibitors with Extended Residence Time on Target.
Bioorg.Med.Chem.Lett., 23, 2013
4LYT
DownloadVisualize
BU of 4lyt by Molmil
COMPARISON OF RADIATION-INDUCED DECAY AND STRUCTURE REFINEMENT FROM X-RAY DATA COLLECTED FROM LYSOZYME CRYSTALS AT LOW AND AMBIENT TEMPERATURES
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Dewan, J.C, Young, A.C.M, Tilton, R.F.
Deposit date:1992-03-20
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparison of Radiation-Induced Decay and Structure Refinement from X-Ray Data Collected from Lysozyme Crystals at Low and Ambient Temperatures
J.Appl.Crystallogr., 26, 1993
3KL4
DownloadVisualize
BU of 3kl4 by Molmil
Recognition of a signal peptide by the signal recognition particle
Descriptor: Signal peptide of yeast dipeptidyl aminopeptidase B, Signal recognition 54 kDa protein
Authors:Janda, C.Y, Nagai, K, Li, J, Oubridge, C.
Deposit date:2009-11-06
Release date:2010-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Recognition of a signal peptide by the signal recognition particle.
Nature, 465, 2010
2B96
DownloadVisualize
BU of 2b96 by Molmil
Third Calcium ion found in an inhibitor bound phospholipase A2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-METHOXYBENZOIC ACID, CALCIUM ION, ...
Authors:Sekar, K, Velmurugan, D, Yamane, T, Tsai, M.D.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Third Calcium ion found in an inhibitor bound phospholipase A2
Acta Crystallogr.,Sect.D, 62, 2006
6VBP
DownloadVisualize
BU of 6vbp by Molmil
Crystal structure of anti-HIV-1 antibody DH815 bound to gp120 V2 peptide
Descriptor: CHLORIDE ION, DH815 heavy chain, DH815 light chain, ...
Authors:Janus, B.M, Ofek, G.
Deposit date:2019-12-19
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.
JCI Insight, 5, 2020
6VBQ
DownloadVisualize
BU of 6vbq by Molmil
Crystal structure of anti-HIV-1 antibody DH822 bound to gp120 V2 peptide
Descriptor: DH822 heavy chain, DH822 light chain, Envelope glycoprotein gp160
Authors:Janus, B.M, Ofek, G.
Deposit date:2019-12-19
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.116 Å)
Cite:HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.
JCI Insight, 5, 2020
6VBO
DownloadVisualize
BU of 6vbo by Molmil
Crystal structure of anti-HIV-1 antibody DH813 bound to gp120 V2 peptide
Descriptor: DH813 heavy chain, DH813 light chain, Envelope glycoprotein gp160
Authors:Janus, B.M, Ofek, G.
Deposit date:2019-12-19
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.683 Å)
Cite:HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.
JCI Insight, 5, 2020
6TMR
DownloadVisualize
BU of 6tmr by Molmil
Mokola virus glycoprotein, monomeric post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, TERBIUM(III) ION
Authors:Belot, L, Roche, S, Legrand, P, Gaudin, Y, Albertini, A.
Deposit date:2019-12-05
Release date:2020-02-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.893 Å)
Cite:Crystal structure of Mokola virus glycoprotein in its post-fusion conformation.
Plos Pathog., 16, 2020
5WKQ
DownloadVisualize
BU of 5wkq by Molmil
2.10 A resolution structure of IpaB (residues 74-242) from Shigella flexneri
Descriptor: Invasin IpaB
Authors:Barta, M.L, Lovell, S, Battaile, K.P, Picking, W.L, Picking, W.D.
Deposit date:2017-07-25
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Using disruptive insertional mutagenesis to identify the in situ structure-function landscape of the Shigella translocator protein IpaB.
Protein Sci., 27, 2018
6W5D
DownloadVisualize
BU of 6w5d by Molmil
Crystal Structure of Fab RSB1
Descriptor: RSB1 Fab Heavy Chain, RSB1 Fab Light Chain
Authors:Harshbarger, W, Chandramouli, S, Malito, M.
Deposit date:2020-03-13
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Convergent structural features of respiratory syncytial virus neutralizing antibodies and plasticity of the site V epitope on prefusion F.
Plos Pathog., 16, 2020
6W52
DownloadVisualize
BU of 6w52 by Molmil
Prefusion RSV F bound by neutralizing antibody RSB1
Descriptor: Fusion glycoprotein F0, Fusion glycoprotein F1 fused with Fibritin trimerization domain, RSB1 Fab Heavy Chain, ...
Authors:Harshbarger, W, Chandramouli, S, Malito, M.
Deposit date:2020-03-12
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Convergent structural features of respiratory syncytial virus neutralizing antibodies and plasticity of the site V epitope on prefusion F.
Plos Pathog., 16, 2020
1GNU
DownloadVisualize
BU of 1gnu by Molmil
GABA(A) receptor associated protein GABARAP
Descriptor: GABARAP, NICKEL (II) ION
Authors:Knight, D, Harris, R, Moss, S, Driscoll, P.C, Keep, N.H.
Deposit date:2001-10-09
Release date:2001-12-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The X-Ray Crystal Structure and Putative Ligand-Derived Peptide Binding Properties of Gamma-Aminobutyric Acid Receptor Type a Receptor-Associated Protein
J.Biol.Chem., 277, 2002
1HPW
DownloadVisualize
BU of 1hpw by Molmil
STRUCTURE OF A PILIN MONOMER FROM PSEUDOMONAS AERUGINOSA: IMPLICATIONS FOR THE ASSEMBLY OF PILI.
Descriptor: FIMBRIAL PROTEIN
Authors:Keizer, D.W, Slupsky, C.M, Campbell, A.P, Irvin, R.T, Sykes, B.D.
Deposit date:2000-12-13
Release date:2001-05-02
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of a pilin monomer from Pseudomonas aeruginosa: implications for the assembly of pili.
J.Biol.Chem., 276, 2001
2BAX
DownloadVisualize
BU of 2bax by Molmil
Atomic Resolution Structure of the Double Mutant (K53,56M) of Bovine Pancreatic Phospholipase A2
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Sekar, K, Yogavel, M, Velmurugan, D, Dauter, Z, Dauter, M, Tsai, M.D.
Deposit date:2005-10-15
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.
Acta Crystallogr.,Sect.F, 61, 2005
4L1G
DownloadVisualize
BU of 4l1g by Molmil
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase from Bacillus cereus
Descriptor: ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, SULFATE ION
Authors:Tsalafouta, A, Fadouloglou, V.E, Kokkinidis, M.
Deposit date:2013-06-03
Release date:2014-06-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Unusual alpha-Carbon Hydroxylation of Proline Promotes Active-Site Maturation.
J.Am.Chem.Soc., 139, 2017
6YF1
DownloadVisualize
BU of 6yf1 by Molmil
FKBP12 in complex with the BMP potentiator compound 8 at 1.12A resolution
Descriptor: (1aR,3R,5S,6R,7S,9R,10R,17aS,20S,21R,22S,25R,25aR)-25-Ethyl-10,22-dihydroxy-20-{(1E)-1-[(1R,3R,4R)-4-hydroxy-3-methoxycyclohexyl]prop-1-en-2-yl}-5,7-dimethoxy-1a,3,9,21-tetramethyloctadecahydro-2H-6,10-epoxyoxireno[p]pyrido[2,1-c][1,4]oxazacyclotricosine-11,12,18,24(1aH,14H)-tetrone, Peptidyl-prolyl cis-trans isomerase FKBP1A
Authors:Kallen, J.
Deposit date:2020-03-25
Release date:2021-03-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.
Cell Chem Biol, 28, 2021
6YF2
DownloadVisualize
BU of 6yf2 by Molmil
FKBP12 in complex with the BMP potentiator compound 6 at 1.03A resolution
Descriptor: (1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S},23~{S},24~{R},25~{S},27~{R})-23,25-dimethoxy-12-[(~{E})-1-[(1~{R},3~{R},4~{R})-3-methoxy-4-oxidanyl-cyclohexyl]prop-1-en-2-yl]-13,19,21,27-tetramethyl-1,14-bis(oxidanyl)-17-(2-oxidanylidenepropyl)-11,28-dioxa-4-azatricyclo[22.3.1.0^{4,9}]octacos-18-ene-2,3,10,16-tetrone, CADMIUM ION, CHLORIDE ION, ...
Authors:Kallen, J.
Deposit date:2020-03-25
Release date:2021-03-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.
Cell Chem Biol, 28, 2021
6YF0
DownloadVisualize
BU of 6yf0 by Molmil
FKBP12 in complex with the BMP potentiator compound 9 at 1.55 A resolution
Descriptor: 18-HYDROXYASCOMYCIN, Peptidyl-prolyl cis-trans isomerase FKBP1A, SULFATE ION
Authors:Kallen, J.
Deposit date:2020-03-25
Release date:2021-03-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.
Cell Chem Biol, 28, 2021
6YF3
DownloadVisualize
BU of 6yf3 by Molmil
FKBP12 in complex with the BMP potentiator compound 10 at 1.00A resolution
Descriptor: (1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S},23~{S},24~{R},25~{S},27~{R})-17-ethyl-25-methoxy-12-[(~{E})-1-[(1~{R},3~{R},4~{R})-3-methoxy-4-oxidanyl-cyclohexyl]prop-1-en-2-yl]-13,19,21,27-tetramethyl-1,14,23-tris(oxidanyl)-11,28-dioxa-4-azatricyclo[22.3.1.0^{4,9}]octacos-18-ene-2,3,10,16-tetrone, CADMIUM ION, CHLORIDE ION, ...
Authors:Kallen, J.
Deposit date:2020-03-25
Release date:2021-03-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.
Cell Chem Biol, 28, 2021
4R8Z
DownloadVisualize
BU of 4r8z by Molmil
Crystal Structure of PA4781 HD-GYP domain from Pseudomonas aeruginosa at 2.2A resolution showing a bi-metallic Ni ion center
Descriptor: CHLORIDE ION, Cyclic di-GMP phosphodiesterase, NICKEL (II) ION
Authors:Giardina, G, Cutruzzolaa, F, Rinaldo, S, Stelitano, V.
Deposit date:2014-09-03
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of functional diversification of the HD-GYP domain revealed by the Pseudomonas aeruginosa PA4781 protein, which displays an unselective bimetallic binding site.
J.Bacteriol., 197, 2015

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon