Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7U97
DownloadVisualize
BU of 7u97 by Molmil
SAAV pH 4.0 capsid structure
Descriptor: Capsid protein
Authors:Mietzsch, M, McKenna, R.
Deposit date:2022-03-10
Release date:2022-04-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7U95
DownloadVisualize
BU of 7u95 by Molmil
SAAV pH 6.0 capsid structure
Descriptor: Capsid protein
Authors:Mietzsch, M, McKenna, R.
Deposit date:2022-03-10
Release date:2022-04-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7U96
DownloadVisualize
BU of 7u96 by Molmil
SAAV pH 5.5 capsid structure
Descriptor: Capsid protein
Authors:Mietzsch, M, McKenna, R.
Deposit date:2022-03-10
Release date:2022-04-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7U94
DownloadVisualize
BU of 7u94 by Molmil
SAAV pH 7.4 capsid structure
Descriptor: Capsid protein
Authors:Mietzsch, M, McKenna, R.
Deposit date:2022-03-10
Release date:2022-04-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
8TU2
DownloadVisualize
BU of 8tu2 by Molmil
The Capsid of Rat Bocavirus
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
8TU1
DownloadVisualize
BU of 8tu1 by Molmil
The Capsid of Porcine Bocavirus 1
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
8TU0
DownloadVisualize
BU of 8tu0 by Molmil
The Capsid of Canine Minute Virus
Descriptor: VP2
Authors:Velez, M, Mietzsch, M, McKenna, R.
Deposit date:2023-08-15
Release date:2023-08-30
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus.
Viruses, 15, 2023
8P8X
DownloadVisualize
BU of 8p8x by Molmil
Crystal structure of a pathogenic mutant variant of human mitochodnrial PheRS
Descriptor: PHENYLALANINE, Phenylalanine--tRNA ligase, mitochondrial
Authors:Chen, W, Kuhle, B.
Deposit date:2023-06-03
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Clinical and molecular characterization of novel FARS2 variants causing neonatal mitochondrial disease.
Mol.Genet.Metab., 140, 2023
5KNN
DownloadVisualize
BU of 5knn by Molmil
Evolutionary gain of alanine mischarging to non-cognate tRNAs with a G4:U69 base pair
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Alanine--tRNA ligase, cytoplasmic
Authors:Sun, L, He, W, Yang, X.-L.
Deposit date:2016-06-28
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair.
J.Am.Chem.Soc., 138, 2016
7QA4
DownloadVisualize
BU of 7qa4 by Molmil
Crystal structure of stabilized H3N2 A/Hong Kong/1/1968 Hemagglutinin at 2.2 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Milder, F.J, Langedijk, J.P.M.
Deposit date:2021-11-16
Release date:2022-02-02
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Universal stabilization of the influenza hemagglutinin by structure-based redesign of the pH switch regions.
Proc.Natl.Acad.Sci.USA, 119, 2022
5N5K
DownloadVisualize
BU of 5n5k by Molmil
Human catalytic MMP-12 in complex with 5-(1,2-dithiolan-3-yl)-N-(3-hydroxypropyl)pentanamide
Descriptor: 5-[(3~{S})-1,2-dithiolan-3-yl]-~{N}-(3-oxidanylpropyl)pentanamide, ACETOHYDROXAMIC ACID, CALCIUM ION, ...
Authors:Calderone, V.
Deposit date:2017-02-14
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lipoyl-Homotaurine Derivative (ADM_12) Reverts Oxaliplatin-Induced Neuropathy and Reduces Cancer Cells Malignancy by Inhibiting Carbonic Anhydrase IX (CAIX).
J. Med. Chem., 60, 2017
5N5J
DownloadVisualize
BU of 5n5j by Molmil
Human MMP12 in complex with 3-(5-(1,2-dithiolan-3-yl)pentanamido)propane-1-sulfonate
Descriptor: 3-[5-[(3~{S})-1,2-dithiolan-3-yl]pentanoylamino]propane-1-sulfonic acid, ACETOHYDROXAMIC ACID, CALCIUM ION, ...
Authors:Calderone, V.
Deposit date:2017-02-14
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lipoyl-Homotaurine Derivative (ADM_12) Reverts Oxaliplatin-Induced Neuropathy and Reduces Cancer Cells Malignancy by Inhibiting Carbonic Anhydrase IX (CAIX).
J. Med. Chem., 60, 2017
4GUQ
DownloadVisualize
BU of 4guq by Molmil
Structure of mutS139F p73 DNA binding domain complexed with 20BP DNA response element
Descriptor: DNA (5'-D(P*GP*AP*AP*CP*AP*TP*GP*TP*TP*C)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Nguyen, H.T, Viadiu, H.
Deposit date:2012-08-29
Release date:2013-08-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code.
Nucleic Acids Res., 41, 2013
4LWV
DownloadVisualize
BU of 4lwv by Molmil
The 2.3A Crystal Structure of Humanized Xenopus MDM2 with RO5545353
Descriptor: (2S,3R,4R,5R)-N-(4-carbamoyl-2-methoxyphenyl)-2'-chloro-4-(3-chloro-2-fluorophenyl)-2-(2,2-dimethylpropyl)-5'-oxo-4',5'-dihydrospiro[pyrrolidine-3,6'-thieno[3,2-b]pyrrole]-5-carboxamide, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Graves, B.J, Lukacs, C, Janson, C.A.
Deposit date:2013-07-28
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Discovery of Potent and Orally Active p53-MDM2 Inhibitors RO5353 and RO2468 for Potential Clinical Development.
ACS MED.CHEM.LETT., 5, 2014
7F3Z
DownloadVisualize
BU of 7f3z by Molmil
Double mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS-K1, C59R+S108N) complexed with Trimethoprim (TOP), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, GLYCEROL, ...
Authors:Vanichtanankul, J, Tanramluk, D, Chitnumsub, P, Yuvaniyama, J, Yuthavong, Y.
Deposit date:2021-06-17
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MANORAA: A machine learning platform to guide protein-ligand design by anchors and influential distances.
Structure, 30, 2022
6SQJ
DownloadVisualize
BU of 6sqj by Molmil
Crystal structure of glycoprotein D of Equine Herpesvirus Type 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein D, ...
Authors:Kremling, V, Loll, B, Azab, W, Osterrieder, N, Dahmani, I, Chiantia, P, Wahl, M.
Deposit date:2019-09-04
Release date:2020-09-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:Crystal structures of glycoprotein D of equine alphaherpesviruses reveal potential binding sites to the entry receptor MHC-I.
Front Microbiol, 14, 2023
2W2X
DownloadVisualize
BU of 2w2x by Molmil
Complex of Rac2 and PLCg2 spPH Domain
Descriptor: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE GAMMA-2, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, ...
Authors:Opaleye, O, Bunney, T.D, Roe, S.M, Pearl, L.H.
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights Into Formation of an Active Signaling Complex between Rac and Phospholipase C Gamma 2.
Mol.Cell, 34, 2009
2W2W
DownloadVisualize
BU of 2w2w by Molmil
PLCg2 Split Pleckstrin Homology (PH) Domain
Descriptor: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE GAMMA-2
Authors:Opaleye, O, Bunney, T.D, Roe, S.M, Pearl, L.H.
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights Into Formation of an Active Signaling Complex between Rac and Phospholipase C Gamma 2.
Mol.Cell, 34, 2009
2W2V
DownloadVisualize
BU of 2w2v by Molmil
Rac2 (G12V) in complex with GTPgS
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2
Authors:Opaleye, O, Bunney, T.D, Roe, S.M, Pearl, L.H.
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights Into Formation of an Active Signaling Complex between Rac and Phospholipase C Gamma 2.
Mol.Cell, 34, 2009
2W2T
DownloadVisualize
BU of 2w2t by Molmil
Rac2 (G12V) in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2
Authors:Opaleye, O, Bunney, T.D, Roe, S.M, Pearl, L.H.
Deposit date:2008-11-04
Release date:2009-05-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights Into Formation of an Active Signaling Complex between Rac and Phospholipase C Gamma 2.
Mol.Cell, 34, 2009
3GK8
DownloadVisualize
BU of 3gk8 by Molmil
X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus
Descriptor: Fab 14 Heavy Chain, Fab 14 Light Chain
Authors:Hafenstein, S, Bowman, V, Sun, T, Nelson, C, Palermo, L, Chipman, P, Battisti, A, Parrish, C.
Deposit date:2009-03-10
Release date:2009-06-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural comparison of different antibodies interacting with parvovirus capsids.
J.Virol., 83, 2009
7NB1
DownloadVisualize
BU of 7nb1 by Molmil
Crystal structure of human choline alpha in complex with an inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-(6-aminopurin-9-yl)-~{N}-[4-(trifluoromethylsulfonyl)phenyl]cyclohexane-1-carboxamide, Choline kinase alpha
Authors:Casale, E, Fasolini, M.
Deposit date:2021-01-25
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of unprecedented ATP-competitive choline kinase inhibitors.
Bioorg.Med.Chem.Lett., 51, 2021
7NB2
DownloadVisualize
BU of 7nb2 by Molmil
Crystal structure of human choline alpha in complex with an inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-(6-azanyl-2-chloranyl-purin-9-yl)-~{N}-(4-methyl-1,3-thiazol-2-yl)cyclohexane-1-carboxamide, Choline kinase alpha, ...
Authors:Casale, E, Fasolini, M.
Deposit date:2021-01-25
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of unprecedented ATP-competitive choline kinase inhibitors.
Bioorg.Med.Chem.Lett., 51, 2021
7NB3
DownloadVisualize
BU of 7nb3 by Molmil
Crystal structure of human choline alpha in complex with an inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-(6-azanyl-2-pyridin-4-yl-purin-9-yl)-~{N}-(3-methoxyphenyl)cyclohexane-1-carboxamide, Choline kinase alpha, ...
Authors:Casale, E, Fasolini, M.
Deposit date:2021-01-25
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of unprecedented ATP-competitive choline kinase inhibitors.
Bioorg.Med.Chem.Lett., 51, 2021
6V1Z
DownloadVisualize
BU of 6v1z by Molmil
genome-containing AAVrh.39 particles
Descriptor: Capsid protein VP1, DNA (5'-D(*CP*A)-3')
Authors:Mietzsch, M, Agbandje-McKenna, M.
Deposit date:2019-11-21
Release date:2019-12-11
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8.
J.Virol., 94, 2020

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon