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6G56
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BU of 6g56 by Molmil
Apo-structure of the alanine racemase from Staphylococcus aureus
Descriptor: Alanine racemase 1, GLYCEROL, SULFATE ION
Authors:Hoegl, A, Sieber, S.A, Schneider, S.
Deposit date:2018-03-29
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics.
Nat Chem, 10, 2018
3QCR
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BU of 3qcr by Molmil
Incomplete structural model of a human telomeric DNA quadruplex-acridine complex.
Descriptor: Human telomeric repeat deoxyribonucleic acid, N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide], POTASSIUM ION
Authors:Collie, G.W, Neidle, S, Parkinson, G.N.
Deposit date:2011-01-17
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of telomeric RNA quadruplex-acridine ligand recognition.
J.Am.Chem.Soc., 133, 2011
3QSC
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BU of 3qsc by Molmil
The first crystal structure of a human telomeric G-quadruplex DNA bound to a metal-containing ligand (a copper complex)
Descriptor: 5'-D(*AP*GP*GP*GP*TP*(BRU)P*AP*GP*GP*GP*TP*T)-3', POTASSIUM ION, [2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappaO}(2-)]copper (II)
Authors:Campbell, N.H, Abd Karim, N.H, Parkinson, G.N, Vilar, R, Neidle, S.
Deposit date:2011-02-21
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of structure-activity relationships between salphen metal complexes and human telomeric DNA quadruplexes.
J.Med.Chem., 55, 2012
3QSF
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BU of 3qsf by Molmil
The first crystal structure of a human telomeric G-quadruplex DNA bound to a metal-containing ligand (a nickel complex)
Descriptor: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*T)-3', POTASSIUM ION, [2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappa O}(2-)]nickel (II)
Authors:Campbell, N.H, Abd Karim, N.H, Parkinson, G.N, Vilar, R, Neidle, S.
Deposit date:2011-02-21
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of structure-activity relationships between salphen metal complexes and human telomeric DNA quadruplexes.
J.Med.Chem., 55, 2012
3QXR
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BU of 3qxr by Molmil
Crystal structure of the brominated CKIT-1 proto-oncogene promoter quadruplex DNA
Descriptor: 5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*(BRU)P*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Wei, D, Parkinson, G.N, Neidle, S.
Deposit date:2011-03-02
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation.
Nucleic Acids Res., 40, 2012
3U0U
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BU of 3u0u by Molmil
Crystal structure of the DB1883-D(CGCGAATTCGCG)2 complex at 1.24 A resolution
Descriptor: 2-(4'-carbamimidoylbiphenyl-4-yl)-1H-indole-6-carboximidamide, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Wei, D.G, Neidle, S.
Deposit date:2011-09-29
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
3U2N
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BU of 3u2n by Molmil
Crystal structure of DNA(CGCGAATTCGCG)2 at 1.25 angstroms
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Wei, D.G, Neidle, S.
Deposit date:2011-10-04
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
3U08
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BU of 3u08 by Molmil
Crystal structure of DB1963-D(CGCGAATTCGCG)2 complex at 1.25 A resolution
Descriptor: 4'-(5-carbamimidoyl-1H-benzimidazol-2-yl)biphenyl-4-carboxamide, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Wei, D.G, Neidle, S.
Deposit date:2011-09-28
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
3U05
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BU of 3u05 by Molmil
Crystal structure of DB1804-D(CGCGAATTCGCG)2 complex
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', 6-(1,4,5,6-tetrahydropyrimidin-2-yl)-2-[4'-(1,4,5,6-tetrahydropyrimidin-2-yl)biphenyl-4-yl]-1H-indole, MAGNESIUM ION
Authors:Wei, D.G, Neidle, S.
Deposit date:2011-09-28
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
5OL1
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BU of 5ol1 by Molmil
Crystal structure of an inactivated Ssp SICLOPPS intein with a CAFHPQ extein
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DNA polymerase III subunit alpha,DNA polymerase III subunit alpha, ...
Authors:Kick, L.M, Schneider, S.
Deposit date:2017-07-26
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Mechanistic Insights into Cyclic Peptide Generation by DnaE Split-Inteins through Quantitative and Structural Investigation.
Chembiochem, 18, 2017
5OL6
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BU of 5ol6 by Molmil
Crystal structure of an inactivated Npu SICLOPPS intein with CAFHPQ extein
Descriptor: Nucleic acid binding, OB-fold, tRNA/helicase-type,DNA-directed DNA polymerase
Authors:Kick, L.M, Schneider, S.
Deposit date:2017-07-26
Release date:2017-09-27
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic Insights into Cyclic Peptide Generation by DnaE Split-Inteins through Quantitative and Structural Investigation.
Chembiochem, 18, 2017
5OL5
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BU of 5ol5 by Molmil
Crystal structure of an inactivated Ssp SICLOPPS intein with CFAHPQ extein
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, DNA polymerase III subunit alpha,DNA polymerase III subunit alpha, ...
Authors:Kick, L.M, Schneider, S.
Deposit date:2017-07-26
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.329 Å)
Cite:Mechanistic Insights into Cyclic Peptide Generation by DnaE Split-Inteins through Quantitative and Structural Investigation.
Chembiochem, 18, 2017
5OL7
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BU of 5ol7 by Molmil
Crystal structure of an inactivated Npu SICLOPPS intein with CFAHPQ extein
Descriptor: CALCIUM ION, COBALT (II) ION, DNA-directed DNA polymerase,DNA-directed DNA polymerase
Authors:Kick, L.M, Schneider, S.
Deposit date:2017-07-26
Release date:2017-09-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic Insights into Cyclic Peptide Generation by DnaE Split-Inteins through Quantitative and Structural Investigation.
Chembiochem, 18, 2017
4KWX
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BU of 4kwx by Molmil
Linear structure of the Holliday junction sequence (TCGGCGCCGA)
Descriptor: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', MAGNESIUM ION
Authors:Skamrova, G, Laponogov, I, Campbell, N, Neidle, S.
Deposit date:2013-05-24
Release date:2014-11-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Linear structure of the Holliday junction sequence (TCGGCGCCGA)
To be Published
4H29
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BU of 4h29 by Molmil
B-raf dimer DNA quadruplex
Descriptor: DNA (5'-D(*GP*GP*GP*CP*GP*GP*GP*GP*AP*GP*GP*GP*GP*GP*AP*AP*GP*GP*GP*A)-3'), POTASSIUM ION
Authors:Wei, D, Parkinson, G, Neidle, S.
Deposit date:2012-09-12
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal Structure of a Promoter Sequence in the B-raf Gene Reveals an Intertwined Dimer Quadruplex.
J.Am.Chem.Soc., 135, 2013
3CWN
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BU of 3cwn by Molmil
Escherichia coli transaldolase b mutant f178y
Descriptor: SULFATE ION, Transaldolase B
Authors:Sandalova, T, Schneider, G, Samland, A.
Deposit date:2008-04-22
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Replacement of a Phenylalanine by a Tyrosine in the Active Site Confers Fructose-6-phosphate Aldolase Activity to the Transaldolase of Escherichia coli and Human Origin.
J.Biol.Chem., 283, 2008
8OVT
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BU of 8ovt by Molmil
Crystal structure of the ligand-free YeGT glycosyltransferase
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, YeGT glycosyltransferase
Authors:Wirth, C, Hunte, C.
Deposit date:2023-04-26
Release date:2024-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tyrosine-modifying glycosylation by Yersinia effectors.
J.Biol.Chem., 300, 2024
8OVS
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BU of 8ovs by Molmil
Crystal structure of YeGT glycosyltransferase with bound UDP
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CADMIUM ION, ...
Authors:Wirth, C, Hunte, C.
Deposit date:2023-04-26
Release date:2024-05-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.123 Å)
Cite:Tyrosine-modifying glycosylation by Yersinia effectors.
J.Biol.Chem., 300, 2024
3PY8
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BU of 3py8 by Molmil
Crystal structure of a mutant of the large fragment of DNA polymerase I from thermus aquaticus in a closed ternary complex with DNA and ddCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*A*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ...
Authors:Schnur, A, Marx, A, Welte, W, Diederichs, K.
Deposit date:2010-12-12
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Learning from Directed Evolution: Thermus aquaticus DNA Polymerase Mutants with Translesion Synthesis Activity.
Chembiochem, 12, 2011
5FX3
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BU of 5fx3 by Molmil
Breaking down the wall: mutation of the tyrosine gate of the universal Escherichia coli fimbrial adhesin FimH
Descriptor: FimH, {[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID
Authors:Bouckaert, J.
Deposit date:2016-02-22
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mutation of Tyr137 of the universal Escherichia coli fimbrial adhesin FimH relaxes the tyrosine gate prior to mannose binding.
IUCrJ, 4, 2017
5FS5
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BU of 5fs5 by Molmil
Breaking down the wall: mutation of the tyrosine gate of the universal Escherichia coli fimbrial adhesin FimH
Descriptor: FIMH, SODIUM ION, heptyl alpha-D-mannopyranoside
Authors:Bouckaert, J.
Deposit date:2015-12-30
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Mutation of Tyr137 of the universal Escherichia coli fimbrial adhesin FimH relaxes the tyrosine gate prior to mannose binding.
IUCrJ, 4, 2017
5FWR
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BU of 5fwr by Molmil
Breaking down the wall: mutation of the tyrosine gate of the universal Escherichia coli fimbrial adhesin FimH
Descriptor: FimH, biphenyl-4-yl alpha-D-mannopyranoside
Authors:Bouckaert, J.
Deposit date:2016-02-21
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Mutation of Tyr137 of the universal Escherichia coli fimbrial adhesin FimH relaxes the tyrosine gate prior to mannose binding.
IUCrJ, 4, 2017
4BUQ
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BU of 4buq by Molmil
Crystal structure of wild type FimH lectin domain in complex with heptyl alpha-D-mannopyrannoside
Descriptor: FIMH, heptyl alpha-D-mannopyranoside
Authors:Rabbani, S, Bouckaert, J, Zalewski, A, Preston, R, Eid, S, Thompson, A, Puorger, C, Glockshuber, R, Ernst, B.
Deposit date:2013-06-23
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh
Acs Med.Chem.Lett., 4, 2013
1E6Z
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BU of 1e6z by Molmil
CHITINASE B FROM SERRATIA MARCESCENS WILDTYPE IN COMPLEX WITH CATALYTIC INTERMEDIATE
Descriptor: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Komander, D, Synstad, B, Eijsink, V.G.H, Van Aalten, D.M.F.
Deposit date:2000-08-23
Release date:2001-06-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Insights Into the Catalytic Mechanism of a Family 18 Exo-Chitinase
Proc.Natl.Acad.Sci.USA, 98, 2001
1EHV
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BU of 1ehv by Molmil
A NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTURE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Johansson, E.M.
Deposit date:2000-02-23
Release date:2000-07-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure.
J.Mol.Biol., 300, 2000

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