Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1JQK
DownloadVisualize
BU of 1jqk by Molmil
Crystal structure of carbon monoxide dehydrogenase from Rhodospirillum rubrum
Descriptor: FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Drennan, C.L, Heo, J, Sintchak, M.D, Schreiter, E, Ludden, P.W.
Deposit date:2001-08-07
Release date:2001-10-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Life on carbon monoxide: X-ray structure of Rhodospirillum rubrum Ni-Fe-S carbon monoxide dehydrogenase.
Proc.Natl.Acad.Sci.USA, 98, 2001
1BMT
DownloadVisualize
BU of 1bmt by Molmil
HOW A PROTEIN BINDS B12: A 3.O ANGSTROM X-RAY STRUCTURE OF THE B12-BINDING DOMAINS OF METHIONINE SYNTHASE
Descriptor: CO-METHYLCOBALAMIN, METHIONINE SYNTHASE
Authors:Drennan, C.L, Huang, S, Drummond, J.T, Matthews, R.G, Ludwig, M.L.
Deposit date:1994-09-02
Release date:1995-06-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase.
Science, 266, 1994
1D03
DownloadVisualize
BU of 1d03 by Molmil
REFINED STRUCTURES OF OXIDIZED FLAVODOXIN FROM ANACYSTIS NIDULANS
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Drennan, C.L, Pattridge, K.A, Weber, C.H, Metzger, A.L, Hoover, D.M, Ludwig, M.L.
Deposit date:1999-09-08
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Refined structures of oxidized flavodoxin from Anacystis nidulans.
J.Mol.Biol., 294, 1999
1CZU
DownloadVisualize
BU of 1czu by Molmil
REFINED STRUCTURES OF OXIDIZED FLAVODOXIN FROM ANACYSTIS NIDULANS
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Drennan, C.L, Pattridge, K.A, Weber, C.H, Metzger, A.L, Hoover, D.M, Ludwig, M.L.
Deposit date:1999-09-07
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined structures of oxidized flavodoxin from Anacystis nidulans.
J.Mol.Biol., 294, 1999
4XJK
DownloadVisualize
BU of 4xjk by Molmil
Crystal structure of Mn(II) Ca(II) Na(I) bound calprotectin
Descriptor: CALCIUM ION, MANGANESE (II) ION, Protein S100-A8, ...
Authors:Drennan, C.L, Bowman, S.E.J.
Deposit date:2015-01-08
Release date:2015-04-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Manganese Binding Properties of Human Calprotectin under Conditions of High and Low Calcium: X-ray Crystallographic and Advanced Electron Paramagnetic Resonance Spectroscopic Analysis.
J.Am.Chem.Soc., 137, 2015
4J1X
DownloadVisualize
BU of 4j1x by Molmil
Crystal Structure of Fe(II)-HppE with alternative substrate (S)-1-HPP
Descriptor: Epoxidase, FE (II) ION, GLYCEROL, ...
Authors:Drennan, C.L, Dey, M.
Deposit date:2013-02-03
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanistic studies of an unprecedented enzyme-catalysed 1,2-phosphono-migration reaction.
Nature, 496, 2013
4J1W
DownloadVisualize
BU of 4j1w by Molmil
Crystal Structure of Fe(II)-HppE with alternative substrate (R)-1-HPP
Descriptor: Epoxidase, FE (II) ION, GLYCEROL, ...
Authors:Drennan, C.L, Dey, M.
Deposit date:2013-02-03
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Mechanistic studies of an unprecedented enzyme-catalysed 1,2-phosphono-migration reaction.
Nature, 496, 2013
3SCG
DownloadVisualize
BU of 3scg by Molmil
Fe(II)-HppE with R-HPP
Descriptor: Epoxidase, FE (II) ION, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Drennan, C.L.
Deposit date:2011-06-07
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis.
J.Am.Chem.Soc., 133, 2011
3SCH
DownloadVisualize
BU of 3sch by Molmil
Co(II)-HppE with R-HPP
Descriptor: COBALT (II) ION, Epoxidase, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Drennan, C.L.
Deposit date:2011-06-07
Release date:2011-07-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis.
J.Am.Chem.Soc., 133, 2011
4M7T
DownloadVisualize
BU of 4m7t by Molmil
Crystal structure of BtrN in complex with AdoMet and 2-DOIA
Descriptor: (1R,2S,3S,4R,5S)-5-aminocyclohexane-1,2,3,4-tetrol, BtrN, GLYCEROL, ...
Authors:Drennan, C.L, Goldman, P.J.
Deposit date:2013-08-12
Release date:2013-10-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.
Proc.Natl.Acad.Sci.USA, 110, 2013
3SCF
DownloadVisualize
BU of 3scf by Molmil
Fe(II)-HppE with S-HPP and NO
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, Epoxidase, FE (II) ION, ...
Authors:Drennan, C.L.
Deposit date:2011-06-07
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis.
J.Am.Chem.Soc., 133, 2011
8V9I
DownloadVisualize
BU of 8v9i by Molmil
1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with D-phenylalanine-derived triazole acetylphosphonate (D-PheTrAP) bound
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 2-HYDROXY BUTANE-1,4-DIOL, 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1S)-1-[(S)-(2-{1-[(1R)-1-carboxy-2-phenylethyl]-1H-1,2,3-triazol-4-yl}ethoxy)(hydroxy)phosphoryl]-1-hydroxyethyl}-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2023-12-08
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.981 Å)
Cite:Potent Inhibition of E. coli DXP Synthase by a gem -Diaryl Bisubstrate Analog.
Acs Infect Dis., 10, 2024
5T6O
DownloadVisualize
BU of 5t6o by Molmil
Structure of the catalytic domain of the class I polyhydroxybutyrate synthase from Cupriavidus necator
Descriptor: Poly-beta-hydroxybuterate polymerase, SULFATE ION
Authors:Wittenborn, E.C, Jost, M, Drennan, C.L.
Deposit date:2016-09-01
Release date:2016-10-26
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Catalytic Domain of the Class I Polyhydroxybutyrate Synthase from Cupriavidus necator.
J.Biol.Chem., 291, 2016
3U33
DownloadVisualize
BU of 3u33 by Molmil
Crystal Structure of the E. coli adaptive response protein AidB in the space group P3(2)
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Putative acyl-CoA dehydrogenase AidB
Authors:Wong, C, Jost, M, Drennan, C.L.
Deposit date:2011-10-04
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Flavin-induced oligomerization in Escherichia coli adaptive response protein AidB.
Biochemistry, 50, 2011
3UBY
DownloadVisualize
BU of 3uby by Molmil
Crystal structure of human alklyadenine DNA glycosylase in a lower and higher-affinity complex with DNA
Descriptor: DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDC)P*TP*TP*GP*CP*CP*T)-3'), DNA-3-methyladenine glycosylase
Authors:Setser, J.W, Lingaraju, G.M, Davis, C.A, Samson, L.D, Drennan, C.L.
Deposit date:2011-10-25
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Searching for DNA lesions: structural evidence for lower- and higher-affinity DNA binding conformations of human alkyladenine DNA glycosylase.
Biochemistry, 51, 2012
6EFN
DownloadVisualize
BU of 6efn by Molmil
Structure of a RiPP maturase, SkfB
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Grell, T.A.J, Drennan, C.L.
Deposit date:2018-08-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.291 Å)
Cite:Structure of a RiPP maturase, SkfB
J.Biol.Chem., 2018
6DJT
DownloadVisualize
BU of 6djt by Molmil
Structure of TYW1 with a lysine-pyruvate adduct bound
Descriptor: DI(HYDROXYETHYL)ETHER, FE2/S3 CLUSTER, GLYCEROL, ...
Authors:Grell, T.A.J, Drennan, C.L.
Deposit date:2018-05-26
Release date:2018-06-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Biochemical and Structural Characterization of a Schiff Base in the Radical-Mediated Biosynthesis of 4-Demethylwyosine by TYW1.
J. Am. Chem. Soc., 140, 2018
1MJG
DownloadVisualize
BU of 1mjg by Molmil
CRYSTAL STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE(CODH/ACS) FROM MOORELLA THERMOACETICA (F. CLOSTRIDIUM THERMOACETICUM)
Descriptor: ACETATE ION, CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT, COPPER (I) ION, ...
Authors:Doukov, T.I, Iverson, T.M, Seravalli, J, Ragsdale, S.W, Drennan, C.L.
Deposit date:2002-08-27
Release date:2003-01-28
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase
Science, 298, 2002
8DPB
DownloadVisualize
BU of 8dpb by Molmil
MeaB in complex with the cobalamin-binding domain of its target mutase with GMPPCP bound
Descriptor: GLYCEROL, MAGNESIUM ION, Methylmalonyl-CoA mutase accessory protein, ...
Authors:Vaccaro, F.A, Born, D.A, Drennan, C.L.
Deposit date:2022-07-15
Release date:2023-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structure of metallochaperone in complex with the cobalamin-binding domain of its target mutase provides insight into cofactor delivery.
Proc.Natl.Acad.Sci.USA, 120, 2023
4IXN
DownloadVisualize
BU of 4ixn by Molmil
Crystal Structure of Zn(II)-bound E37A,C66A,C67A triple mutant YjiA GTPase
Descriptor: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
Authors:Jost, M, Drennan, C.L.
Deposit date:2013-01-26
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
5FAV
DownloadVisualize
BU of 5fav by Molmil
E491Q mutant of choline TMA-lyase
Descriptor: Choline trimethylamine-lyase, MALONATE ION, SODIUM ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAY
DownloadVisualize
BU of 5fay by Molmil
Y208F mutant of choline TMA-lyase
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, MALONATE ION, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAW
DownloadVisualize
BU of 5faw by Molmil
T502A mutant of choline TMA-lyase
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, MALONATE ION, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAU
DownloadVisualize
BU of 5fau by Molmil
wild-type choline TMA lyase in complex with choline
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, GLYCEROL
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
6XN6
DownloadVisualize
BU of 6xn6 by Molmil
ScoE with the CABA substrate bound and His299 and Arg157 flipped out
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-02
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon