Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1FGT
DownloadVisualize
BU of 1fgt by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697N MUTANT
Descriptor: FE (III) ION, SEED LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1F8N
DownloadVisualize
BU of 1f8n by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, NEW REFINEMENT
Descriptor: FE (II) ION, LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.
Deposit date:2000-06-30
Release date:2001-07-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FGM
DownloadVisualize
BU of 1fgm by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, N694H MUTANT
Descriptor: FE (III) ION, SEED LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.R.
Deposit date:2000-07-28
Release date:2001-10-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FGQ
DownloadVisualize
BU of 1fgq by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q495E MUTANT
Descriptor: FE (III) ION, SEED LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FGR
DownloadVisualize
BU of 1fgr by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697E MUTANT
Descriptor: FE (III) ION, SEED LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FGO
DownloadVisualize
BU of 1fgo by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q495A MUTANT
Descriptor: FE (III) ION, SEED LIPOXYGENASE-1
Authors:Tomchick, D.R, Minor, W, Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1A4X
DownloadVisualize
BU of 1a4x by Molmil
PYRR, THE BACILLUS SUBTILIS PYRIMIDINE BIOSYNTHETIC OPERON REPRESSOR, HEXAMERIC FORM
Descriptor: PYRIMIDINE OPERON REGULATORY PROTEIN PYRR, SULFATE ION
Authors:Tomchick, D.R, Turner, R.J, Switzer, R.W, Smith, J.L.
Deposit date:1998-02-08
Release date:1998-08-05
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Adaptation of an enzyme to regulatory function: structure of Bacillus subtilis PyrR, a pyr RNA-binding attenuation protein and uracil phosphoribosyltransferase.
Structure, 6, 1998
1A3C
DownloadVisualize
BU of 1a3c by Molmil
PYRR, THE BACILLUS SUBTILIS PYRIMIDINE BIOSYNTHETIC OPERON REPRESSOR, DIMERIC FORM
Descriptor: PYRIMIDINE OPERON REGULATORY PROTEIN PYRR, SAMARIUM (III) ION, SULFATE ION
Authors:Tomchick, D.R, Turner, R.J, Switzer, R.W, Smith, J.L.
Deposit date:1998-01-20
Release date:1998-08-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Adaptation of an enzyme to regulatory function: structure of Bacillus subtilis PyrR, a pyr RNA-binding attenuation protein and uracil phosphoribosyltransferase.
Structure, 6, 1998
9B8E
DownloadVisualize
BU of 9b8e by Molmil
Structure of S-nitrosylated Legionella pneumophila Ceg10.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Tomchick, D.R, Heisler, D.B, Alto, N.M.
Deposit date:2024-03-29
Release date:2024-04-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Exploiting bacterial effector proteins to uncover evolutionarily conserved antiviral host machinery.
Plos Pathog., 20, 2024
9B8D
DownloadVisualize
BU of 9b8d by Molmil
Structure of Legionella pneumophila Ceg10
Descriptor: 1,2-ETHANEDIOL, Ceg10, PHOSPHATE ION
Authors:Tomchick, D.R, Heisler, D.B, Alto, N.M.
Deposit date:2024-03-29
Release date:2024-04-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Exploiting bacterial effector proteins to uncover evolutionarily conserved antiviral host machinery.
Plos Pathog., 20, 2024
3U64
DownloadVisualize
BU of 3u64 by Molmil
The Crystal Structure of Tat-T (Tp0956)
Descriptor: Protein TP_0956, SULFATE ION
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2011-10-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural, Bioinformatic, and In Vivo Analyses of Two Treponema pallidum Lipoproteins Reveal a Unique TRAP Transporter.
J.Mol.Biol., 416, 2012
5JDA
DownloadVisualize
BU of 5jda by Molmil
Bacillus cereus CotH kinase plus Mg2+/AMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
Deposit date:2016-04-15
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Phosphorylation of spore coat proteins by a family of atypical protein kinases.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JD9
DownloadVisualize
BU of 5jd9 by Molmil
Bacillus cereus CotH kinase
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Spore coat protein H
Authors:Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
Deposit date:2016-04-15
Release date:2016-05-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Phosphorylation of spore coat proteins by a family of atypical protein kinases.
Proc.Natl.Acad.Sci.USA, 113, 2016
2QYF
DownloadVisualize
BU of 2qyf by Molmil
Crystal structure of the Mad2/p31(comet)/Mad2-binding peptide ternary complex
Descriptor: MAD2L1-binding protein, Mitotic spindle assembly checkpoint protein MAD2A, peptide
Authors:Tomchick, D.R, Luo, X.
Deposit date:2007-08-14
Release date:2008-01-29
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:p31comet blocks Mad2 activation through structural mimicry.
Cell(Cambridge,Mass.), 131, 2007
8VTS
DownloadVisualize
BU of 8vts by Molmil
Meis1 homeobox domain bound to paromomycin fragment
Descriptor: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
Authors:Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
Deposit date:2024-01-27
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Identification of FDA-Approved Drugs That Induce Heart Regeneration in Mammals
to be published
8VTT
DownloadVisualize
BU of 8vtt by Molmil
Meis1 homeobox domain bound to neomycin fragment
Descriptor: Homeobox protein Meis1, RIBOSTAMYCIN, SULFATE ION
Authors:Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N, Sadek, H.A.
Deposit date:2024-01-27
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification of FDA-Approved Drugs That Induce Heart Regeneration in Mammals
to be published
8DML
DownloadVisualize
BU of 8dml by Molmil
Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt chenodeoxycholate
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHENODEOXYCHOLIC ACID, ...
Authors:Tomchick, D.R, Orth, K, Zou, A.J.
Deposit date:2022-07-08
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Molecular determinants for differential activation of the bile acid receptor from the pathogen Vibrio parahaemolyticus.
J.Biol.Chem., 299, 2023
4NPK
DownloadVisualize
BU of 4npk by Molmil
Extended-Synaptotagmin 2, C2A- and C2B-domains, calcium bound
Descriptor: CALCIUM ION, Extended synaptotagmin-2
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2013-11-21
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.
Structure, 22, 2014
6DFT
DownloadVisualize
BU of 6dft by Molmil
Trypanosoma brucei deoxyhypusine synthase
Descriptor: Deoxyhypusine synthase, Deoxyhypusine synthase regulatory subunit, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Tomchick, D.R, Phillips, M.A, Afanador, G.A.
Deposit date:2018-05-15
Release date:2018-08-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Trypanosomatid Deoxyhypusine Synthase Activity Is Dependent on Shared Active-Site Complementation between Pseudoenzyme Paralogs.
Structure, 26, 2018
6E0B
DownloadVisualize
BU of 6e0b by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase C276F mutant bound with triazolopyrimidine-based inhibitor DSM1
Descriptor: 5-methyl-7-(naphthalen-2-ylamino)-1H-[1,2,4]triazolo[1,5-a]pyrimidine-3,8-diium, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
Authors:Tomchick, D.R, Phillips, M.A, Deng, X.
Deposit date:2018-07-06
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Identification and Mechanistic Understanding of Dihydroorotate Dehydrogenase Point Mutations in Plasmodium falciparum that Confer in Vitro Resistance to the Clinical Candidate DSM265.
ACS Infect Dis, 5, 2019
6EAC
DownloadVisualize
BU of 6eac by Molmil
Pseudomonas syringae SelO
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
Deposit date:2018-08-02
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.269 Å)
Cite:Protein AMPylation by an Evolutionarily Conserved Pseudokinase.
Cell, 175, 2018
3KY9
DownloadVisualize
BU of 3ky9 by Molmil
Autoinhibited Vav1
Descriptor: Proto-oncogene vav, ZINC ION
Authors:Tomchick, D.R, Rosen, M.K, Machius, M, Yu, B.
Deposit date:2009-12-04
Release date:2010-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.731 Å)
Cite:Structural and Energetic Mechanisms of Cooperative Autoinhibition and Activation of Vav1
Cell(Cambridge,Mass.), 140, 2010
3BEN
DownloadVisualize
BU of 3ben by Molmil
Structure of N-(12-imidazolyl-dodecanoyl)-L-leucine inhibitor bound to the heme domain of Cytochrome P450-BM3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome P450 102, MAGNESIUM ION, ...
Authors:Tomchick, D.R.
Deposit date:2007-11-19
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of inhibitor-bound P450BM-3 reveals open conformation of substrate access channel.
Biochemistry, 47, 2008
3L15
DownloadVisualize
BU of 3l15 by Molmil
Human Tead2 transcriptional factor
Descriptor: GLYCEROL, Transcriptional enhancer factor TEF-4
Authors:Tomchick, D.R, Luo, X, Tian, W.
Deposit date:2009-12-10
Release date:2010-04-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional analysis of the YAP-binding domain of human TEAD2.
Proc.Natl.Acad.Sci.USA, 107, 2010
5T8V
DownloadVisualize
BU of 5t8v by Molmil
Chaetomium thermophilum cohesin loader SCC2, C-terminal fragment
Descriptor: CITRIC ACID, Putative uncharacterized protein
Authors:Tomchick, D.R, Yu, H, Kikuchi, S, Ouyang, Z, Borek, D, Otwinowski, Z.
Deposit date:2016-09-08
Release date:2016-10-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Crystal structure of the cohesin loader Scc2 and insight into cohesinopathy.
Proc.Natl.Acad.Sci.USA, 113, 2016

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon