Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7LQ0
DownloadVisualize
BU of 7lq0 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ...
Authors:Thapar, R, Andrew, A.S, Tainer, J.A.
Deposit date:2021-02-12
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases
To Be Published
7LWA
DownloadVisualize
BU of 7lwa by Molmil
Human Exonuclease 5 crystal structure (T88E) in complex with ssDNA and Mg
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Exonuclease V, ...
Authors:Tsai, C.L, Tainer, J.A.
Deposit date:2021-02-28
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
Mol.Cell, 81, 2021
7LW7
DownloadVisualize
BU of 7lw7 by Molmil
Human Exonuclease 5 crystal structure
Descriptor: 1,2-ETHANEDIOL, Exonuclease V, GLYCEROL, ...
Authors:Tsai, C.L, Tainer, J.A.
Deposit date:2021-02-27
Release date:2021-07-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
Mol.Cell, 81, 2021
7LW9
DownloadVisualize
BU of 7lw9 by Molmil
Human Exonuclease 5 crystal structure in complex with ssDNA, Sm, and Na
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*AP*TP*TP*GP*CP*TP*GP*AP*AP*GP*GP*G)-3'), ...
Authors:Tsai, C.L, Tainer, J.A.
Deposit date:2021-02-28
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
Mol.Cell, 81, 2021
7LW8
DownloadVisualize
BU of 7lw8 by Molmil
Human Exonuclease 5 crystal structure in complex with a ssDNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Exonuclease V, ...
Authors:Tsai, C.L, Tainer, J.A.
Deposit date:2021-02-28
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
Mol.Cell, 81, 2021
4HDV
DownloadVisualize
BU of 4hdv by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2,6-diaminopurine
Descriptor: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(1AP)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
Authors:Tubbs, J.L, Tainer, J.A.
Deposit date:2012-10-02
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
7N8W
DownloadVisualize
BU of 7n8w by Molmil
Crystal structure of ERI2 nuclease bound to rAMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 2, ...
Authors:Thapar, R, Arvai, A.S, Tainer, J.A.
Deposit date:2021-06-15
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of ERI2 nuclease bound to rAMP
To Be Published
7N8V
DownloadVisualize
BU of 7n8v by Molmil
Crystal structure of free ERI2 nuclease
Descriptor: ERI1 exoribonuclease 2, SULFATE ION
Authors:Thapar, R, Arvai, A.S, Tainer, J.A.
Deposit date:2021-06-15
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of free ERI2 nuclease
To Be Published
4HDU
DownloadVisualize
BU of 4hdu by Molmil
Crystal structure of S. pombe ATL1 in complex with damaged DNA containing 2-aminopurine
Descriptor: 5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3', 5'-D(*GP*CP*CP*AP*TP*GP*(2PR)P*CP*TP*AP*GP*TP*A)-3', Alkyltransferase-like protein 1
Authors:Tubbs, J.L, Tainer, J.A.
Deposit date:2012-10-02
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-{pi} interactions.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NQS
DownloadVisualize
BU of 3nqs by Molmil
Crystal Structure of Inducible Nitric Oxide Synthase with N-Nitrosated-pterin
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE, ...
Authors:Rosenfeld, R.J, Getzoff, E.D, Tainer, J.A.
Deposit date:2010-06-29
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nitric-oxide synthase forms N-NO-pterin and S-NO-cys: implications for activity, allostery, and regulation.
J.Biol.Chem., 285, 2010
1M8H
DownloadVisualize
BU of 1m8h by Molmil
inducible nitric oxide synthase with 6-nitroindazole bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-24
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M9K
DownloadVisualize
BU of 1m9k by Molmil
Human Endothelial Nitric Oxide Synthase with 7-Nitroindazole Bound
Descriptor: 7-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-29
Release date:2002-08-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
2R27
DownloadVisualize
BU of 2r27 by Molmil
Constitutively zinc-deficient mutant of human superoxide dismutase (SOD), C6A, H80S, H83S, C111S
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn]
Authors:Roberts, B.R, Getzoff, E.D, Karplus, P.A, Beckman, J.S, Tainer, J.A.
Deposit date:2007-08-24
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of zinc-deficient human superoxide dismutase and implications for ALS.
J.Mol.Biol., 373, 2007
2QT2
DownloadVisualize
BU of 2qt2 by Molmil
Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-31
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the Green Fluorescence Protein Fluorophore Biosynthesis Pathway
To be Published
2QRF
DownloadVisualize
BU of 2qrf by Molmil
Green Fluorescent Protein: Cyclized-only Intermediate of Chromophore Maturation in the Q183E variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-28
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Chromophore - Cyclized Intermediate
To be Published
2QZ0
DownloadVisualize
BU of 2qz0 by Molmil
Mature Q183E variant of Green Fluorescent Protein Chromophore
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-08-15
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
1M9A
DownloadVisualize
BU of 1m9a by Molmil
Crystal structure of the 26 kDa glutathione S-transferase from Schistosoma japonicum complexed with S-hexylglutathione
Descriptor: Glutathione S-Transferase 26 kDa, S-HEXYLGLUTATHIONE
Authors:Cardoso, R.M.F, Daniels, D.S, Bruns, C.M, Tainer, J.A.
Deposit date:2002-07-28
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the electrophile binding site and substrate binding mode of the 26-kDa glutathione S-transferase from Schistosoma japonicum
PROTEINS: STRUCT.,FUNCT.,GENET., 51, 2003
1M9Q
DownloadVisualize
BU of 1m9q by Molmil
human endothelial nitric oxide synthase with 5-nitroindazole bound
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-NITROINDAZOLE, ISOPROPYL ALCOHOL, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-29
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M8D
DownloadVisualize
BU of 1m8d by Molmil
inducible nitric oxide synthase with Chlorzoxazone bound
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, CHLORZOXAZONE, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-24
Release date:2002-08-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M9T
DownloadVisualize
BU of 1m9t by Molmil
Inducible Nitric Oxide Synthase with 3-Bromo-7-Nitroindazole bound
Descriptor: 1,2-ETHANEDIOL, 3-BROMO-7-NITROINDAZOLE, 5,6,7,8-TETRAHYDROBIOPTERIN, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-09-05
Release date:2002-09-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1N18
DownloadVisualize
BU of 1n18 by Molmil
Thermostable mutant of Human Superoxide Dismutase, C6A, C111S
Descriptor: COPPER (I) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Cardoso, R.M.F, Thayer, M.M, DiDonato, M, Lo, T.P, Bruns, C.K, Getzoff, E.D, Tainer, J.A.
Deposit date:2002-10-16
Release date:2002-11-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase.
J.Mol.Biol., 324, 2002
1M9J
DownloadVisualize
BU of 1m9j by Molmil
human endothelial nitric oxide synthase with chlorzoxazone bound
Descriptor: CHLORZOXAZONE, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-29
Release date:2002-08-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M8E
DownloadVisualize
BU of 1m8e by Molmil
inducible nitric oxide synthase with 7-nitroindazole bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-24
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M9M
DownloadVisualize
BU of 1m9m by Molmil
human endothelial nitric oxide synthase with 6-nitroindazole bound
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-NITROINDAZOLE, ISOPROPYL ALCOHOL, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-29
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
1M8I
DownloadVisualize
BU of 1m8i by Molmil
inducible nitric oxide synthase with 5-nitroindazole bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 5-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-07-24
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon