Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1POV
DownloadVisualize
BU of 1pov by Molmil
ROLE AND MECHANISM OF THE MATURATION CLEAVAGE OF VP0 IN POLIOVIRUS ASSEMBLY: STRUCTURE OF THE EMPTY CAPSID ASSEMBLY INTERMEDIATE AT 2.9 ANGSTROMS RESOLUTION
Descriptor: MYRISTIC ACID, POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1), SPHINGOSINE
Authors:Basavappa, R, Filman, D.J, Hogle, J.M.
Deposit date:1995-08-10
Release date:1995-12-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Role and mechanism of the maturation cleavage of VP0 in poliovirus assembly: structure of the empty capsid assembly intermediate at 2.9 A resolution.
Protein Sci., 3, 1994
2PLV
DownloadVisualize
BU of 2plv by Molmil
STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Descriptor: HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1), HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2), HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3), ...
Authors:Filman, D.J, Hogle, J.M.
Deposit date:1989-10-17
Release date:1989-10-17
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural factors that control conformational transitions and serotype specificity in type 3 poliovirus
EMBO J., 8, 1989
6EPA
DownloadVisualize
BU of 6epa by Molmil
Structure of dNCS-1 bound to the NCS-1/Ric8a protein/protein interaction regulator IGS-1.76
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, FI18190p1, ...
Authors:Sanchez-Barrena, M.J, Daniel, M, Infantes, L.
Deposit date:2017-10-11
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Deciphering the Inhibition of the Neuronal Calcium Sensor 1 and the Guanine Exchange Factor Ric8a with a Small Phenothiazine Molecule for the Rational Generation of Therapeutic Synapse Function Regulators.
J. Med. Chem., 61, 2018
6I1X
DownloadVisualize
BU of 6i1x by Molmil
Aeromonas hydrophila ExeD
Descriptor: Type II secretion system protein D
Authors:Contreras-Martel, C, Farias Estrozi, L.
Deposit date:2018-10-30
Release date:2019-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system.
Plos Pathog., 15, 2019
6I1Y
DownloadVisualize
BU of 6i1y by Molmil
Vibrio vulnificus EpsD
Descriptor: General secretion pathway protein GspD
Authors:Contreras-Martel, C, Farias Estrozi, L.
Deposit date:2018-10-30
Release date:2019-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system.
Plos Pathog., 15, 2019
5FYX
DownloadVisualize
BU of 5fyx by Molmil
Crystal structure of Drosophila NCS-1 bound to penothiazine FD16
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, FREQUENIN 2, ...
Authors:Martinez-Gonzalez, L, Chaves-Sanjuan, A, Infantes, L, Sanchez-Barrena, M.J.
Deposit date:2016-03-10
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interference of the complex between NCS-1 and Ric8a with phenothiazines regulates synaptic function and is an approach for fragile X syndrome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8VKT
DownloadVisualize
BU of 8vkt by Molmil
Crystallographic structure of dimetalated DapE from Enterococcus faecium
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Probable succinyl-diaminopimelate desuccinylase, ...
Authors:Gonzalez-Segura, L, Diaz-Vilchis, A, Terrazas-Lopez, M, Diaz-Sanchez, A.G.
Deposit date:2024-01-09
Release date:2024-05-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:The three-dimensional structure of DapE from Enterococcus faecium reveals new insights into DapE/ArgE subfamily ligand specificity.
Int.J.Biol.Macromol., 270, 2024
7UOI
DownloadVisualize
BU of 7uoi by Molmil
Crystallographic structure of DapE from Enterococcus faecium
Descriptor: GLYCEROL, ZINC ION, succinyl-diaminopimelate desuccinylase
Authors:Gonzalez-Segura, L, Diaz-Vilchis, A, Terrazas-Lopez, M, Diaz-Sanchez, A.G.
Deposit date:2022-04-12
Release date:2023-04-12
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The three-dimensional structure of DapE from Enterococcus faecium reveals new insights into DapE/ArgE subfamily ligand specificity.
Int.J.Biol.Macromol., 270, 2024
5AAN
DownloadVisualize
BU of 5aan by Molmil
Crystal structure of Drosophila NCS-1 bound to penothiazine FD44
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, CG5907-PA, ...
Authors:Chaves-Sanjuan, A, Infantes, L, Sanchez-Barrena, M.J.
Deposit date:2015-07-27
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Interference of the complex between NCS-1 and Ric8a with phenothiazines regulates synaptic function and is an approach for fragile X syndrome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G08
DownloadVisualize
BU of 5g08 by Molmil
Crystal structure of Drosophila NCS-1 bound to chlorpromazine
Descriptor: 1,2-ETHANEDIOL, 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CALCIUM ION, ...
Authors:Chaves-Sanjuan, A, Infantes, L, Sanchez-Barrena, M.J.
Deposit date:2016-03-17
Release date:2017-01-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Interference of the complex between NCS-1 and Ric8a with phenothiazines regulates synaptic function and is an approach for fragile X syndrome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OC1
DownloadVisualize
BU of 5oc1 by Molmil
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid
Descriptor: 4-METHOXYBENZOIC ACID, Aryl-alcohol oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Carro, J, Martinez-Julvez, M, Medina, M, Martinez, A, Ferreira, P.
Deposit date:2017-06-29
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein dynamics promote hydride tunnelling in substrate oxidation by aryl-alcohol oxidase.
Phys Chem Chem Phys, 19, 2017
5DTZ
DownloadVisualize
BU of 5dtz by Molmil
Crystal structure of rsFolder in the fluorescent on-state
Descriptor: DI(HYDROXYETHYL)ETHER, Green fluorescent protein
Authors:El Khatib, M, Colletier, J.P, Adam, V.
Deposit date:2015-09-18
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rational design of ultrastable and reversibly photoswitchable fluorescent proteins for super-resolution imaging of the bacterial periplasm.
Sci Rep, 6, 2016
5DU0
DownloadVisualize
BU of 5du0 by Molmil
Crystal structure of rsFolder in the non-fluorescent off-state
Descriptor: Green fluorescent protein
Authors:El Khatib, M, Colletier, J.P, Adam, V.
Deposit date:2015-09-18
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Rational design of ultrastable and reversibly photoswitchable fluorescent proteins for super-resolution imaging of the bacterial periplasm.
Sci Rep, 6, 2016
8PF2
DownloadVisualize
BU of 8pf2 by Molmil
Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound ODDHK16
Descriptor: Chemotaxis protein CheA, RESORCINOL
Authors:Adhav, A, Marina, A.
Deposit date:2023-06-15
Release date:2024-06-26
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Repurposing Hsp90 inhibitors as antimicrobials targeting two-component systems identifies compounds leading to loss of bacterial membrane integrity.
Microbiol Spectr, 12, 2024
4WC4
DownloadVisualize
BU of 4wc4 by Molmil
tRNA-processing enzyme complex 2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Poly A polymerase, RNA (74-MER)
Authors:Yamashita, S, Tomita, K.
Deposit date:2014-09-04
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Measurement of Acceptor-T Psi C Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme.
Structure, 23, 2015
4WC6
DownloadVisualize
BU of 4wc6 by Molmil
Structure of tRNA-processing enzyme complex 4
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Poly A polymerase, RNA (75-mer)
Authors:Yamashita, S, Tomita, K.
Deposit date:2014-09-04
Release date:2015-04-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Measurement of Acceptor-T Psi C Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme.
Structure, 23, 2015
4WC3
DownloadVisualize
BU of 4wc3 by Molmil
Structure of tRNA-processing enzyme complex 1
Descriptor: Poly A polymerase, RNA 76-mer
Authors:Yamashita, S, Tomita, K.
Deposit date:2014-09-04
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Measurement of Acceptor-T Psi C Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme.
Structure, 23, 2015
6HPO
DownloadVisualize
BU of 6hpo by Molmil
Crystallographic structure of the catalytic domain of Human Phenylalanine Hydroxylase (hPAH CD) in complex with iron at 1.6 Angstrom
Descriptor: FE (III) ION, Phenylalanine-4-hydroxylase
Authors:Alcorlo Pages, M, Innselset Flydal, M.
Deposit date:2018-09-21
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of full-length human phenylalanine hydroxylase in complex with tetrahydrobiopterin.
Proc.Natl.Acad.Sci.USA, 116, 2019
6HYC
DownloadVisualize
BU of 6hyc by Molmil
The structure of full-length human phenylalanine hydroxylase in complex with the cofactor and negative regulator tetrahydrobiopterin
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, Phenylalanine-4-hydroxylase
Authors:Alcorlo Pages, M, Flydal, I.M.
Deposit date:2018-10-19
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of full-length human phenylalanine hydroxylase in complex with tetrahydrobiopterin.
Proc.Natl.Acad.Sci.USA, 116, 2019
8BGA
DownloadVisualize
BU of 8bga by Molmil
Structure of Mpro in complex with FGA146
Descriptor: 3C-like proteinase nsp5, 4-methoxy-~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-4-nitro-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]-1~{H}-indole-2-carboxamide
Authors:Medrano, F.J, Romero, A.
Deposit date:2022-10-27
Release date:2023-11-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Peptidyl nitroalkene inhibitors of main protease rationalized by computational and crystallographic investigations as antivirals against SARS-CoV-2.
Commun Chem, 7, 2024
8PI3
DownloadVisualize
BU of 8pi3 by Molmil
Cathepsin S Y132D mutant in complex with NNPI-C10 inhibitor
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CADMIUM ION, ...
Authors:Petruzzella, A, Lau, K, Pojer, F, Oricchio, E.
Deposit date:2023-06-21
Release date:2024-06-05
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Antibody-peptide conjugates deliver covalent inhibitors blocking oncogenic cathepsins.
Nat.Chem.Biol., 20, 2024
8OYD
DownloadVisualize
BU of 8oyd by Molmil
TrkB transmembrane domain NMR structure in DMPC/DHPC bicelles
Descriptor: BDNF/NT-3 growth factors receptor
Authors:Kot, E.F, Mineev, K.S, Goncharuk, S.A.
Deposit date:2023-05-04
Release date:2024-05-15
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural basis for the transmembrane signaling and antidepressant-induced activation of the receptor tyrosine kinase TrkB
Nature Communications, 2024
5FXE
DownloadVisualize
BU of 5fxe by Molmil
Crystal structure of eugenol oxidase in complex with coniferyl alcohol
Descriptor: (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal, EUGENOL OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Nguyen, Q.-T, de Gonzalo, G, Binda, C, Martinez, A.R, Mattevi, A, Fraaije, M.W.
Deposit date:2016-03-01
Release date:2016-07-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biocatalytic Properties and Structural Analysis of Eugenol Oxidase from Rhodococcus Jostii Rha1: A Versatile Oxidative Biocatalyst.
Chembiochem, 17, 2016
5FXF
DownloadVisualize
BU of 5fxf by Molmil
Crystal structure of eugenol oxidase in complex with benzoate
Descriptor: BENZOIC ACID, EUGENOL OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Nguyen, Q.-T, de Gonzalo, G, Binda, C, Martinez, A.R, Mattevi, A, Fraaije, M.W.
Deposit date:2016-03-01
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biocatalytic Properties and Structural Analysis of Eugenol Oxidase from Rhodococcus Jostii Rha1: A Versatile Oxidative Biocatalyst.
Chembiochem, 17, 2016
5FXP
DownloadVisualize
BU of 5fxp by Molmil
Crystal structure of eugenol oxidase in complex with vanillin
Descriptor: 4-hydroxy-3-methoxybenzaldehyde, EUGENOL OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Nguyen, Q.-T, de Gonzalo, G, Binda, C, Martinez, A.R, Mattevi, A, Fraaije, M.W.
Deposit date:2016-03-02
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Biocatalytic Properties and Structural Analysis of Eugenol Oxidase from Rhodococcus Jostii Rha1: A Versatile Oxidative Biocatalyst.
Chembiochem, 17, 2016

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon