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1T8R
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BU of 1t8r by Molmil
Crystal Structure of E. coli AMP Nucleosidase
Descriptor: AMP nucleosidase
Authors:Zhang, Y, Cottet, S.E, Ealick, S.E.
Deposit date:2004-05-13
Release date:2004-08-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of Escherichia coli AMP Nucleosidase Reveals Similarity to Nucleoside Phosphorylases
STRUCTURE, 12, 2004
2AA0
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BU of 2aa0 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside
Descriptor: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Zhang, Y, el Kouni, M.H, Ealick, S.E.
Deposit date:2005-07-13
Release date:2006-07-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
2AB8
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BU of 2ab8 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside and AMP-PCP
Descriptor: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, CHLORIDE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, el Kouni, M.H, Ealick, S.E.
Deposit date:2005-07-14
Release date:2006-07-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
2L3M
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BU of 2l3m by Molmil
Solution structure of the putative copper-ion-binding protein from Bacillus anthracis str. Ames
Descriptor: Copper-ion-binding protein
Authors:Zhang, Y, Winsor, J, Dubrovska, I, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-16
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:To be published
To be Published
2A7Q
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BU of 2a7q by Molmil
Crystal structure of human dCK complexed with clofarabine and ADP
Descriptor: 2-CHLORO-9-(2-DEOXY-2-FLUORO-B -D-ARABINOFURANOSYL)-9H-PURIN-6-AMINE, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase, ...
Authors:Zhang, Y, Secrist III, J.A, Ealick, S.E.
Deposit date:2005-07-05
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The structure of human deoxycytidine kinase in complex with clofarabine reveals key interactions for prodrug activation.
Acta Crystallogr.,Sect.D, 62, 2006
2LD5
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BU of 2ld5 by Molmil
Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
Descriptor: DNA (5'-D(*CP*AP*AP*AP*TP*AP*AP*AP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*TP*AP*TP*TP*TP*G)-3'), Homeobox protein Hox-A13
Authors:Zhang, Y.
Deposit date:2011-05-14
Release date:2011-08-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
2LLO
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BU of 2llo by Molmil
Solution NMR-derived structure of calmodulin N-lobe bound with ER alpha peptide
Descriptor: CALCIUM ION, Calmodulin, Estrogen receptor
Authors:Zhang, Y.
Deposit date:2011-11-15
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2L80
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BU of 2l80 by Molmil
Solution Structure of the Zinc Finger Domain of USP13
Descriptor: Ubiquitin carboxyl-terminal hydrolase 13, ZINC ION
Authors:Zhang, Y, Zhou, C, Zhou, Z, Song, A, Hu, H.
Deposit date:2010-12-28
Release date:2011-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biochemical Characterization of the Ubiquitin Receptors in USP13 Reveals Different Catalytic Activation of Deubiquitination from Its Analogue USP5
To be Published
2LLQ
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BU of 2llq by Molmil
Solution nmr-derived structure of calmodulin c-lobe bound with er alpha peptide
Descriptor: CALCIUM ION, Calmodulin, Estrogen receptor
Authors:Zhang, Y.
Deposit date:2011-11-15
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
5M5G
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BU of 5m5g by Molmil
Crystal structure of the Chaetomium Thermophilum polycomb repressive complex 2 (PRC2)
Descriptor: Fragment from molecular 2 (region containing putative polycomb protein Suz12), HISTONE H3 11-Mer peptide, Putative uncharacterized protein, ...
Authors:Zhang, Y, Justin, N, Wilson, J, Gamblin, S.
Deposit date:2016-10-21
Release date:2017-01-11
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Comment on "Structural basis of histone H3K27 trimethylation by an active polycomb repressive complex 2".
Science, 354, 2016
4G7Z
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BU of 4g7z by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex containing 5-BrU at template-strand position +1
Descriptor: 5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*(BRU)P*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', DNA-directed RNA polymerase subunit alpha, ...
Authors:Zhang, Y, Ebright, R.H.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.815 Å)
Cite:Structural basis of transcription initiation.
Science, 338, 2012
4G7H
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BU of 4g7h by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex
Descriptor: 5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', DNA-directed RNA polymerase subunit alpha, ...
Authors:Zhang, Y, Ebright, R.H.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcription initiation.
Science, 338, 2012
4OIN
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BU of 4oin by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077
Descriptor: (2Z)-2-methylbut-2-enoic acid, 5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', ...
Authors:Zhang, Y, Ebright, R.H, Arnold, E.
Deposit date:2014-01-20
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
4OIO
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BU of 4oio by Molmil
Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription initiation
Descriptor: 5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, ...
Authors:Zhang, Y, Ebright, R.H, Arnold, E.
Deposit date:2014-01-20
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
4G7O
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BU of 4g7o by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA
Descriptor: 5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', 5'-R(*GP*A)-3', ...
Authors:Zhang, Y, Ebright, R.H.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Structural basis of transcription initiation.
Science, 338, 2012
3LBS
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BU of 3lbs by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form)
Descriptor: Maltose-binding periplasmic protein, Renin receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhang, Y, Garavito, R.M.
Deposit date:2010-01-08
Release date:2011-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
4L13
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BU of 4l13 by Molmil
Crystal structure of Ligand Free EGFP-based Calcium Sensor CatchER
Descriptor: ACETIC ACID, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-01
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4L1I
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BU of 4l1i by Molmil
Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca
Descriptor: CALCIUM ION, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-03
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4L12
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BU of 4l12 by Molmil
Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd
Descriptor: EGFP-based Calcium Sensor CatchER, GADOLINIUM ATOM
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-01
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
3LZC
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BU of 3lzc by Molmil
Crystal structure of Dph2 from Pyrococcus horikoshii
Descriptor: Dph2
Authors:Zhang, Y, Zhu, X, Torelli, A.T, Lee, M, Dzikovski, B, Koralewski, R.M, Wang, E, Freed, J, Krebs, C, Lin, H, Ealick, S.E.
Deposit date:2010-03-01
Release date:2010-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
Nature, 465, 2010
3UUX
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BU of 3uux by Molmil
Crystal structure of yeast Fis1 in complex with Mdv1 fragment containing N-terminal extension and coiled coil domains
Descriptor: Mitochondria fission 1 protein, Mitochondrial division protein 1
Authors:Zhang, Y, Chan, N.C, Gristick, H, Chan, D.C.
Deposit date:2011-11-28
Release date:2012-02-08
Last modified:2012-04-25
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structure of mitochondrial fission complex reveals scaffolding function for mitochondrial division 1 (mdv1) coiled coil.
J.Biol.Chem., 287, 2012
5JKF
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BU of 5jkf by Molmil
Crystal structure of esterase E22
Descriptor: Esterase E22
Authors:Zhang, Y, Wang, P, Yao, Q.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structural basis for substrate recognition and catalysis of a novel esterase E22 with a homoserine transacetylase-like fold
To Be Published
5JKJ
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BU of 5jkj by Molmil
Crystal structure of esterase E22 L374D mutant
Descriptor: Esterase E22
Authors:Zhang, Y, Wang, P, Yao, Q.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for substrate recognition and catalysis of a novel esterase E22 with a homoserine transacetylase-like fold
To Be Published
5KXF
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BU of 5kxf by Molmil
Crystal structure of the SPOC domain of the Arabidopsis flowering regulator FPA
Descriptor: Flowering time control protein FPA
Authors:Zhang, Y, Tong, L.
Deposit date:2016-07-20
Release date:2016-10-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the SPOC Domain of the Arabidopsis Flowering Regulator FPA.
Plos One, 11, 2016
9ATN
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BU of 9atn by Molmil
NMR structure of the MLL4 PHD2/3 fingers in complex with ASXL2
Descriptor: Histone-lysine N-methyltransferase 2D, Polycomb group protein ASXL2, ZINC ION
Authors:Zhang, Y, Zandian, M, Kutateladze, T.
Deposit date:2024-02-27
Release date:2024-06-19
Method:SOLUTION NMR
Cite:ASXLs binding to the PHD2/3 fingers of MLL4 provides a mechanism for the recruitment of BAP1 to active enhancers.
Nat Commun, 15, 2024

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數據於2024-09-04公開中

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