Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4JUH
DownloadVisualize
BU of 4juh by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G complexed with avian receptor analogue LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
Deposit date:2013-03-24
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4JTV
DownloadVisualize
BU of 4jtv by Molmil
Crystal structure of 2009 pandemic influenza virus hemagglutinin complexed with human receptor analogue LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
Deposit date:2013-03-24
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4K67
DownloadVisualize
BU of 4k67 by Molmil
Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005 complexed with human receptor analog LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4K62
DownloadVisualize
BU of 4k62 by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus A/Indonesia/5/2005
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4K66
DownloadVisualize
BU of 4k66 by Molmil
Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005 complexed with avian receptor analog LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4K63
DownloadVisualize
BU of 4k63 by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with avian receptor analog LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4K65
DownloadVisualize
BU of 4k65 by Molmil
Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4K64
DownloadVisualize
BU of 4k64 by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with human receptor analog LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4MH7
DownloadVisualize
BU of 4mh7 by Molmil
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC1896
Descriptor: CHLORIDE ION, MAGNESIUM ION, N-butyl-2-(butylamino)-4-[(trans-4-hydroxycyclohexyl)amino]-N-methylpyrimidine-5-carboxamide, ...
Authors:Zhang, W, McIver, A, Stashko, M.A, Deryckere, D, Branchford, B.R, Hunter, D, Kireev, D.B, Miley, M.J, Norris-Drouin, J, Stewart, W.M, Lee, M, Sather, S, Zhou, Y, DiPaola, J.A, Machius, M, Janzen, W.P, Earp, H.S, Graham, D.K, Frye, S, Wang, X.
Deposit date:2013-08-29
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery of Mer specific tyrosine kinase inhibitors for the treatment and prevention of thrombosis.
J.Med.Chem., 56, 2013
4MHA
DownloadVisualize
BU of 4mha by Molmil
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC1817
Descriptor: 2-(butylamino)-4-[(trans-4-hydroxycyclohexyl)amino]-N-(4-sulfamoylbenzyl)pyrimidine-5-carboxamide, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Zhang, W, Mciver, A, Stashko, M.A, Deryckere, D, Branchford, B.R, Hunter, D, Kireev, D.B, Miley, D.B.M, Norris-Drouin, J, Stewart, W.M, Lee, M, Sather, S, Zhou, Y, Dipaola, J.A, Machius, M, Janzen, W.P, Earp, H.S, Graham, D.K, Frye, S, Wang, X.
Deposit date:2013-08-29
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Discovery of Mer specific tyrosine kinase inhibitors for the treatment and prevention of thrombosis.
J.Med.Chem., 56, 2013
4RC4
DownloadVisualize
BU of 4rc4 by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
Descriptor: 1,4-bis[(2-aminoethyl)amino]-5,8-dihydroxyanthracene-9,10-dione, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Wan, X, Huang, N.
Deposit date:2014-09-14
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
To be Published
4RBL
DownloadVisualize
BU of 4rbl by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
Descriptor: 1,4,5,8-tetrahydroxyanthracene-9,10-dione, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Wan, X, Huang, N.
Deposit date:2014-09-12
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
To be Published, 2014
4RC3
DownloadVisualize
BU of 4rc3 by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
Descriptor: 1,4-dihydroxy-5,8-bis{[2-(2-hydroxyethoxy)ethyl]amino}anthracene-9,10-dione, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Wan, X, Huang, N.
Deposit date:2014-09-14
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.338 Å)
Cite:Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
To be Published
4RC2
DownloadVisualize
BU of 4rc2 by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
Descriptor: 1-amino-5,8-dihydroxy-4-({2-[(2-hydroxyethyl)amino]ethyl}amino)anthracene-9,10-dione, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Wan, X, Huang, N.
Deposit date:2014-09-14
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives
To be Published
5ZMR
DownloadVisualize
BU of 5zmr by Molmil
Solution Structure of the N-terminal Domain of the Yeast Rpn5
Descriptor: 26S proteasome regulatory subunit RPN5
Authors:Zhang, W, Zhao, C, Li, H, Hu, Y, Jin, C.
Deposit date:2018-04-05
Release date:2018-09-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain of proteasome lid subunit Rpn5
Biochem. Biophys. Res. Commun., 504, 2018
7VJT
DownloadVisualize
BU of 7vjt by Molmil
Crystal Structure of Mtb Pks13-TE in complex with inhibitor coumestan derivative 8
Descriptor: 3,8-bis(oxidanyl)-7-(piperidin-1-ylmethyl)-[1]benzofuro[3,2-c]chromen-6-one, Polyketide synthase Pks13 (Termination polyketide synthase)
Authors:Zhang, W, Wang, S.S, Yu, L.F.
Deposit date:2021-09-28
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure-Based Optimization of Coumestan Derivatives as Polyketide Synthase 13-Thioesterase(Pks13-TE) Inhibitors with Improved hERG Profiles for Mycobacterium tuberculosis Treatment.
J.Med.Chem., 65, 2022
7UFL
DownloadVisualize
BU of 7ufl by Molmil
Crystal structure of chimeric omicron RBD (strain BA.2) complexed with chimeric mouse ACE2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, W, Shi, K, Geng, Q, Ye, G, Aihara, H, Li, F.
Deposit date:2022-03-22
Release date:2022-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural basis for mouse receptor recognition by SARS-CoV-2 omicron variant.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UFK
DownloadVisualize
BU of 7ufk by Molmil
Crystal structure of chimeric omicron RBD (strain BA.2) complexed with human ACE2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, W, Shi, K, Geng, Q, Ye, G, Aihara, H, Li, F.
Deposit date:2022-03-22
Release date:2022-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural basis for mouse receptor recognition by SARS-CoV-2 omicron variant.
Proc.Natl.Acad.Sci.USA, 119, 2022
6U7Z
DownloadVisualize
BU of 6u7z by Molmil
RNA hairpin structure containing one TNA nucleotide as primer
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3'), RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*GP*CP*CP*GP*AP*AP*AP*GP*(TG))-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-03
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021
6U8U
DownloadVisualize
BU of 6u8u by Molmil
RNA duplex bound with TNA 3'-3' imidazolium dimer
Descriptor: 2-amino-3-[(R)-{[(3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}(hydroxy)phosphoryl]-1-[(S)-{[(3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-05
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021
6U89
DownloadVisualize
BU of 6u89 by Molmil
RNA duplex, bound with TNA monomer
Descriptor: 2-azanyl-9-[(2~{R},3~{R},4~{S})-3-oxidanyl-4-[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxy-oxolan-2-yl]-1~{H}-purin-6-one, RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-04
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021
6U6J
DownloadVisualize
BU of 6u6j by Molmil
RNA-monomer complex containing pyrophosphate linkage
Descriptor: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(DPG))-3')
Authors:Zhang, W, Szostak, J.W, Giurgiu, C, Wright, T.
Deposit date:2019-08-29
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Prebiotically Plausible "Patching" of RNA Backbone Cleavage through a 3'-5' Pyrophosphate Linkage.
J.Am.Chem.Soc., 141, 2019
6U8F
DownloadVisualize
BU of 6u8f by Molmil
RNA hairpin, bound with TNA monomer
Descriptor: 2-azanyl-9-[(2~{R},3~{R},4~{S})-3-oxidanyl-4-[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxy-oxolan-2-yl]-1~{H}-purin-6-one, RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*AP*UP*GP*AP*AP*AP*GP*U)-3'), RNA (5'-R(P*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-04
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021
6U7Y
DownloadVisualize
BU of 6u7y by Molmil
RNA hairpin structure containing one TNA nucleotide as template
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3'), RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*(TG)P*CP*CP*GP*AP*AP*AP*GP*G)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-03
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021
2L83
DownloadVisualize
BU of 2l83 by Molmil
A protein from Haloferax volcanii
Descriptor: Small archaeal modifier protein 1
Authors:Zhang, W, Liao, S, Fan, K, Tu, X.
Deposit date:2011-01-03
Release date:2012-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ionic strength-dependent conformations of a ubiquitin-like small archaeal modifier protein (SAMP1) from Haloferax volcanii.
Protein Sci., 22, 2013

220760

數據於2024-06-05公開中

PDB statisticsPDBj update infoContact PDBjnumon