Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2M6O
DownloadVisualize
BU of 2m6o by Molmil
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Descriptor: Uncharacterized protein
Authors:Liu, B, Tabib-Salazar, A, Doughty, P, Lewis, R, Ghosh, S, Parsy, M, Simpson, P, Matthews, S, Paget, M.
Deposit date:2013-04-06
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.
Nucleic Acids Res., 41, 2013
1Z3L
DownloadVisualize
BU of 1z3l by Molmil
X-Ray Crystal Structure of a Mutant Ribonuclease S (F8Anb)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Z3P
DownloadVisualize
BU of 1z3p by Molmil
X-Ray crystal structure of a mutant Ribonuclease S (M13Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Rao, B.V, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Z3M
DownloadVisualize
BU of 1z3m by Molmil
Crystal structure of mutant Ribonuclease S (F8Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
4YK0
DownloadVisualize
BU of 4yk0 by Molmil
Crystal structure of the CBP bromodomain in complex with CPI098
Descriptor: (4R)-4-methyl-1,3,4,5-tetrahydro-2H-1,5-benzodiazepin-2-one, 1,2-ETHANEDIOL, CREB-binding protein
Authors:Bellon, S.F, Jayaram, H.
Deposit date:2015-03-03
Release date:2016-04-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Regulatory T Cell Modulation by CBP/EP300 Bromodomain Inhibition.
J.Biol.Chem., 291, 2016
5DBM
DownloadVisualize
BU of 5dbm by Molmil
Crystal structure of the CBP bromodomain in complex with CPI703
Descriptor: (4R)-6-(1-tert-butyl-1H-pyrazol-4-yl)-4-methyl-1,3,4,5-tetrahydro-2H-1,5-benzodiazepin-2-one, CREB-binding protein
Authors:Setser, J.W, Poy, F, Bellon, S.F.
Deposit date:2015-08-21
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Regulatory T Cell Modulation by CBP/EP300 Bromodomain Inhibition.
J.Biol.Chem., 291, 2016
1DWW
DownloadVisualize
BU of 1dww by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and dihydrobiopterin
Descriptor: 2-AMINO-6-(1,2-DIHYDROXY-PROPYL)-7,8-DIHYDRO-6H-PTERIDIN-4-ONE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWX
DownloadVisualize
BU of 1dwx by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and tetrahydrobiopterin
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWV
DownloadVisualize
BU of 1dwv by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and 4-amino tetrahydrobiopterin
Descriptor: 2,4-DIAMINO-6-[2,3-DIHYDROXY-PROP-3-YL]-5,6,7,8-TETRAHYDROPTERIDINE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1QOM
DownloadVisualize
BU of 1qom by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH SWAPPED N-TERMINAL HOOK
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, NITRIC OXIDE SYNTHASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Crane, B.R, Rosenfeld, R.A, Arvai, A.S, Tainer, J.A, Stuehr, D.J, Getzoff, E.D.
Deposit date:1999-11-15
Release date:1999-12-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:N-Terminal Domain Swapping and Metal Ion Binding in Nitric Oxide Synthase Dimerization
Embo J., 18, 1999
1VKX
DownloadVisualize
BU of 1vkx by Molmil
CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA
Descriptor: DNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3'), PROTEIN (NF-KAPPA B P50 SUBUNIT), ...
Authors:Chen, F, Huang, D.B, Ghosh, G.
Deposit date:1997-09-17
Release date:1998-12-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of p50/p65 heterodimer of transcription factor NF-kappaB bound to DNA.
Nature, 391, 1998
2M2C
DownloadVisualize
BU of 2m2c by Molmil
Solution structure of Duplex DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3')
Authors:Ghosh, A, Kar, R.K, Chatterjee, S, Bhunia, A.
Deposit date:2012-12-18
Release date:2013-01-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Indolicidin targets duplex DNA: structural and mechanistic insight through a combination of spectroscopy and microscopy.
Chemmedchem, 9, 2014
7SKQ
DownloadVisualize
BU of 7skq by Molmil
BtSCoV-Rf1.2004 Papain-Like protease bound to the non-covalent inhibitor GRL-0617
Descriptor: 3C-like proteinase, 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide, ZINC ION
Authors:Freitas, B, Durie, I, Shepard, J, O'Boyle, B, Enos, S, Pegan, S.D.
Deposit date:2021-10-21
Release date:2022-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Exploring Noncovalent Protease Inhibitors for the Treatment of Severe Acute Respiratory Syndrome and Severe Acute Respiratory Syndrome-Like Coronaviruses.
Acs Infect Dis., 8, 2022
7SKR
DownloadVisualize
BU of 7skr by Molmil
BtSCoV-Rf1.2004 Papain-Like protease bound to the non-covalent inhibitor 37
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(2-methoxypyridin-4-yl)methyl]-2-[(1R)-1-(naphthalen-1-yl)ethyl]-2-azaspiro[3.3]heptane-6-carboxamide, ...
Authors:Durie, I, Shepard, J, Freitas, B, O'Boyle, B, Enos, S, Pegan, S.D.
Deposit date:2021-10-21
Release date:2022-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Exploring Noncovalent Protease Inhibitors for the Treatment of Severe Acute Respiratory Syndrome and Severe Acute Respiratory Syndrome-Like Coronaviruses.
Acs Infect Dis., 8, 2022
3NEC
DownloadVisualize
BU of 3nec by Molmil
Crystal Structure of Toxoplasma gondii Profilin
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Inflammatory profilin, SULFATE ION
Authors:Kucera, K, Modis, Y.
Deposit date:2010-06-08
Release date:2010-09-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based analysis of Toxoplasma gondii profilin: a parasite-specific motif is required for recognition by Toll-like receptor 11.
J.Mol.Biol., 403, 2010
5NCK
DownloadVisualize
BU of 5nck by Molmil
The Crystal Structure of N-acetylmannosamine kinase in Fusobacterium nucleatum
Descriptor: N-acetylmannosamine kinase
Authors:Caing-Carlsson, R, Sharma, A, Friemann, R, Ramaswamy, S.
Deposit date:2017-03-06
Release date:2017-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of N-acetylmannosamine kinase from Fusobacterium nucleatum.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1BFS
DownloadVisualize
BU of 1bfs by Molmil
STRUCTURE OF NF-KB P50 HOMODIMER BOUND TO A KB SITE
Descriptor: NUCLEAR FACTOR NF-KAPPA-B P50
Authors:Huang, D.B, Huxford, T, Chen, Y.Q, Ghosh, G.
Deposit date:1997-09-12
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The role of DNA in the mechanism of NFkappaB dimer formation: crystal structures of the dimerization domains of the p50 and p65 subunits.
Structure, 5, 1997
1BFT
DownloadVisualize
BU of 1bft by Molmil
STRUCTURE OF NF-KB P50 HOMODIMER BOUND TO A KB SITE
Descriptor: NUCLEAR FACTOR NF-KAPPA-B P65
Authors:Huang, D.B, Huxford, T, Chen, Y.Q, Ghosh, G.
Deposit date:1997-09-12
Release date:1998-01-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of DNA in the mechanism of NFkappaB dimer formation: crystal structures of the dimerization domains of the p50 and p65 subunits.
Structure, 5, 1997
4LXG
DownloadVisualize
BU of 4lxg by Molmil
Crystal structure of DxnB2, a carbon - carbon bond hydrolase from Sphingomonas wittichii RW1
Descriptor: MCP Hydrolase, SULFATE ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2013-07-29
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites.
Biochemistry, 52, 2013
4LXH
DownloadVisualize
BU of 4lxh by Molmil
Crystal Structure of the S105A mutant of a carbon-carbon bond hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with 3-Cl HOPDA
Descriptor: (2Z,4E)-3-chloro-2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid, MCP Hydrolase, SODIUM ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2013-07-29
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites.
Biochemistry, 52, 2013
7AZT
DownloadVisualize
BU of 7azt by Molmil
X-ray crystallographic structure of (6-4)photolyase from Drosophila melanogaster at room temperature
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, RE11660p
Authors:Cellini, A, Wahlgren, W.Y, Henry, L, Westenhoff, S, Pandey, S.
Deposit date:2020-11-17
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.
Acta Crystallogr D Struct Biol, 77, 2021
7AYV
DownloadVisualize
BU of 7ayv by Molmil
X-ray crystallographic structure of (6-4)photolyase from Drosophila melanogaster at cryogenic temperature
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, RE11660p, ...
Authors:Cellini, A, Wahlgren, W.Y, Henry, L, Westenhoff, S.
Deposit date:2020-11-13
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.
Acta Crystallogr D Struct Biol, 77, 2021
4M9I
DownloadVisualize
BU of 4m9i by Molmil
A125C NS2B-NS3 protease from dengue virus at pH 5.5
Descriptor: NS2B-NS3 protease
Authors:Yildiz, M, Hardy, J.A.
Deposit date:2013-08-14
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
4M9K
DownloadVisualize
BU of 4m9k by Molmil
NS2B-NS3 protease from dengue virus at pH 5.5
Descriptor: NS2B-NS3 protease
Authors:Yildiz, M, Hardy, J.A.
Deposit date:2013-08-14
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
4M9T
DownloadVisualize
BU of 4m9t by Molmil
NS2B-NS3 protease from dengue virus in the presence of DTNB, a covalent allosteric inhibitor
Descriptor: CHLORIDE ION, NS2B-NS3 protease
Authors:Bell, J.A, Yildiz, M, Hardy, J.A.
Deposit date:2013-08-15
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013

227111

數據於2024-11-06公開中

PDB statisticsPDBj update infoContact PDBjnumon