2R68
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3P2K
| Structure of an antibiotic related Methyltransferase | Descriptor: | 16S rRNA methylase, S-ADENOSYLMETHIONINE | Authors: | Sivaraman, J, Husain, N. | Deposit date: | 2010-10-02 | Release date: | 2010-11-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural basis for the methylation of A1408 in 16S rRNA by a panaminoglycoside resistance methyltransferase NpmA from a clinical isolate and analysis of the NpmA interactions with the 30S ribosomal subunit. Nucleic Acids Res., 39, 2011
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3P2E
| Structure of an antibiotic related Methyltransferase | Descriptor: | 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE | Authors: | Sivaraman, J, Husain, N. | Deposit date: | 2010-10-02 | Release date: | 2010-11-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Structural basis for the methylation of A1408 in 16S rRNA by a panaminoglycoside resistance methyltransferase NpmA from a clinical isolate and analysis of the NpmA interactions with the 30S ribosomal subunit. Nucleic Acids Res., 2010
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3P2I
| Structure of an antibiotic related Methyltransferase | Descriptor: | 16S rRNA methylase | Authors: | Sivaraman, J, Husain, N. | Deposit date: | 2010-10-02 | Release date: | 2010-11-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural basis for the methylation of A1408 in 16S rRNA by a panaminoglycoside resistance methyltransferase NpmA from a clinical isolate and analysis of the NpmA interactions with the 30S ribosomal subunit. Nucleic Acids Res., 39, 2011
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3PB3
| Structure of an Antibiotic Related Methyltransferase | Descriptor: | 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE | Authors: | Sivaraman, J, Husain, N. | Deposit date: | 2010-10-20 | Release date: | 2010-11-24 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis for the methylation of A1408 in 16S rRNA by a panaminoglycoside resistance methyltransferase NpmA from a clinical isolate and analysis of the NpmA interactions with the 30S ribosomal subunit. Nucleic Acids Res., 2010
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8K70
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8JB0
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8JAX
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4U00
| Crystal structure of TTHA1159 in complex with ADP | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Amino acid ABC transporter, ATP-binding protein, ... | Authors: | Karthiga Devi, S, Chichili, V.P.R, Velmurugan, D, Sivaraman, J. | Deposit date: | 2014-07-11 | Release date: | 2015-05-13 | Last modified: | 2021-09-15 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus J.Struct.Biol., 190, 2015
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4U02
| Crystal structure of apo-TTHA1159 | Descriptor: | Amino acid ABC transporter, ATP-binding protein, SULFATE ION | Authors: | Karthiga Devi, S, Chichili, V.P.R, Velmurugan, D, Sivaraman, J. | Deposit date: | 2014-07-11 | Release date: | 2015-05-13 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.399 Å) | Cite: | Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus J.Struct.Biol., 190, 2015
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1CJL
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7C28
| Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom | Descriptor: | SULFATE ION, Synergistic-type venom protein S2C4 | Authors: | Jobichen, C, Narumi, A, Sivaraman, J, Kini, R.M. | Deposit date: | 2020-05-07 | Release date: | 2020-10-14 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution. Biochem.J., 477, 2020
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8H8X
| Cryo-EM structure of HACE1 monomer | Descriptor: | E3 ubiquitin-protein ligase HACE1 | Authors: | Singh, S, Machida, S, Tulsian, N.K, Choong, Y.K, Ng, J, Shanker, S, Yaochen, L.D, Shi, J, Sivaraman, J. | Deposit date: | 2022-10-24 | Release date: | 2023-06-28 | Last modified: | 2024-01-10 | Method: | ELECTRON MICROSCOPY (3.92 Å) | Cite: | Structural Basis for the Enzymatic Activity of the HACE1 HECT-Type E3 Ligase Through N-Terminal Helix Dimerization. Adv Sci, 10, 2023
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8HAE
| Cryo-EM structure of HACE1 dimer | Descriptor: | E3 ubiquitin-protein ligase HACE1 | Authors: | Singh, S, Machida, S, Tulsian, N.K, Choong, Y.K, Ng, J, Shanker, S, Yaochen, L.D, Shi, J, Sivaraman, J, Machida, S. | Deposit date: | 2022-10-26 | Release date: | 2023-06-28 | Last modified: | 2023-10-04 | Method: | ELECTRON MICROSCOPY (4.55 Å) | Cite: | Structural Basis for the Enzymatic Activity of the HACE1 HECT-Type E3 Ligase Through N-Terminal Helix Dimerization. Adv Sci, 10, 2023
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4RUD
| Crystal structure of a three finger toxin | Descriptor: | Three-finger toxin 3b, ZINC ION | Authors: | Jobichen, C, Sivaraman, J. | Deposit date: | 2014-11-18 | Release date: | 2016-05-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Fulditoxin, representing a new class of dimeric snake toxins, defines novel pharmacology at nicotinic ACh receptors. Br.J.Pharmacol., 177, 2020
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8GWR
| Near full length Kidney type Glutaminase in complex with 2,2-Dimethyl-2,3-Dihydrobenzo[a] Phenanthridin-4(1H)-one (DDP) | Descriptor: | 2,2-dimethyl-1,3-dihydrobenzo[a]phenanthridin-4-one, Glutaminase kidney isoform, mitochondrial | Authors: | Shankar, S, Jobichen, C, Sivaraman, J. | Deposit date: | 2022-09-17 | Release date: | 2022-12-21 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.801 Å) | Cite: | A novel allosteric site employs a conserved inhibition mechanism in human kidney-type glutaminase. Febs J., 290, 2023
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7Y6G
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7Y6P
| Cryo-EM structure if bacterioferritin holoform | Descriptor: | Bacterioferritin, FE (II) ION, FE (III) ION, ... | Authors: | Jobichen, C, Sivaraman, J. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-09-13 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Bacterioferritin nanocage structures uncover the biomineralization process in ferritins. Pnas Nexus, 2, 2023
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7Y6F
| Cryo-EM structure of Apo form of ScBfr | Descriptor: | Bacterioferritin, FE (II) ION, FE (III) ION, ... | Authors: | Jobichen, C, Sivaraman, J. | Deposit date: | 2022-06-20 | Release date: | 2023-07-05 | Last modified: | 2023-09-13 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Bacterioferritin nanocage structures uncover the biomineralization process in ferritins. Pnas Nexus, 2, 2023
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8I54
| Lb2Cas12a RNA DNA complex | Descriptor: | DNA (25-MER), DNA (5'-D(*AP*GP*TP*GP*CP*TP*TP*TP*A)-3'), Lb2Cas12a, ... | Authors: | Li, J, Sivaraman, J, Satoru, M. | Deposit date: | 2023-01-24 | Release date: | 2023-02-22 | Last modified: | 2023-05-03 | Method: | ELECTRON MICROSCOPY (3.95 Å) | Cite: | Structures of apo Cas12a and its complex with crRNA and DNA reveal the dynamics of ternary complex formation and target DNA cleavage. Plos Biol., 21, 2023
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2ED6
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8H9D
| Crystal structure of Cas12a protein | Descriptor: | Cas12A, MAGNESIUM ION, RNA (5'-R(P*AP*AP*UP*UP*UP*CP*UP*AP*CP*UP*AP*AP*GP*UP*GP*UP*AP*GP*AP*UP*C)-3'), ... | Authors: | Jianwei, L, Jobichen, C, Sivaraman, J. | Deposit date: | 2022-10-25 | Release date: | 2023-02-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structures of apo Cas12a and its complex with crRNA and DNA reveal the dynamics of ternary complex formation and target DNA cleavage. Plos Biol., 21, 2023
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4E53
| Calmodulin and Nm peptide complex | Descriptor: | Calmodulin, Linker, IQ motif of Neuromodulin | Authors: | Kumar, V, Sivaraman, J. | Deposit date: | 2012-03-13 | Release date: | 2013-03-20 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.69 Å) | Cite: | Structural basis for the interaction of unstructured neuron specific substrates neuromodulin and neurogranin with calmodulin Sci Rep, 3, 2013
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4E50
| Calmodulin and Ng peptide complex | Descriptor: | Calmodulin, Linker, IQ motif of Neurogranin | Authors: | Kumar, V, Sivaraman, J. | Deposit date: | 2012-03-13 | Release date: | 2013-03-20 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural basis for the interaction of unstructured neuron specific substrates neuromodulin and neurogranin with calmodulin Sci Rep, 3, 2013
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2EDM
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