Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7VPF
DownloadVisualize
BU of 7vpf by Molmil
Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4
Descriptor: CALCIUM ION, Xylose isomerase, ZINC ION
Authors:Park, H.H, Lee, J.H, Kwon, S.
Deposit date:2021-10-16
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4.
Biochem.Biophys.Res.Commun., 585, 2021
7D2N
DownloadVisualize
BU of 7d2n by Molmil
Crystal structure of MazE-MazF (Form-III) from Deinococcus radiodurans
Descriptor: AbrB/MazE/SpoVT family DNA-binding domain-containing protein, Endoribonuclease MazF
Authors:Dhanasingh, I, Lee, S.H.
Deposit date:2020-09-17
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Functional and structural characterization of Deinococcus radiodurans R1 MazEF toxin-antitoxin system, Dr0416-Dr0417.
J.Microbiol, 59, 2021
7D28
DownloadVisualize
BU of 7d28 by Molmil
Crystal structure of MazF (Form-I) from Deinococcus radiodurans
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endoribonuclease MazF, GLYCEROL
Authors:Dhanasingh, I, Lee, S.H.
Deposit date:2020-09-16
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Functional and structural characterization of Deinococcus radiodurans R1 MazEF toxin-antitoxin system, Dr0416-Dr0417.
J.Microbiol, 59, 2021
7D2Q
DownloadVisualize
BU of 7d2q by Molmil
Crystal structure of MazE-MazF (Form-I) from Deinococcus radiodurans
Descriptor: AbrB/MazE/SpoVT family DNA-binding domain-containing protein, Endoribonuclease MazF
Authors:Dhanasingh, I, Lee, S.H.
Deposit date:2020-09-17
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Functional and structural characterization of Deinococcus radiodurans R1 MazEF toxin-antitoxin system, Dr0416-Dr0417.
J.Microbiol, 59, 2021
7D2P
DownloadVisualize
BU of 7d2p by Molmil
Crystal structure of MazE-MazF (Form-II) from Deinococcus radiodurans
Descriptor: AbrB/MazE/SpoVT family DNA-binding domain-containing protein, Endoribonuclease MazF
Authors:Dhanasingh, I, Lee, S.H.
Deposit date:2020-09-17
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Functional and structural characterization of Deinococcus radiodurans R1 MazEF toxin-antitoxin system, Dr0416-Dr0417.
J.Microbiol, 59, 2021
7D2M
DownloadVisualize
BU of 7d2m by Molmil
Crystal structure of MazF (Form-II) from Deinococcus radiodurans
Descriptor: Endoribonuclease MazF, SULFATE ION, TRIPHOSPHATE
Authors:Dhanasingh, I, Lee, S.H.
Deposit date:2020-09-17
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Functional and structural characterization of Deinococcus radiodurans R1 MazEF toxin-antitoxin system, Dr0416-Dr0417.
J.Microbiol, 59, 2021
6LF5
DownloadVisualize
BU of 6lf5 by Molmil
The solution structure of ShSPI
Descriptor: ShSPI
Authors:Luan, N, Rong, M.Q, Liu, J.X, Lai, R.
Deposit date:2019-11-29
Release date:2020-12-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and Characterization of ShSPI, a Kazal-Type Elastase Inhibitor from the Venom of Scolopendra Hainanum .
Toxins, 11, 2019
2Q99
DownloadVisualize
BU of 2q99 by Molmil
Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Descriptor: Saccharopine dehydrogenase [NAD+, L-lysine-forming
Authors:Berghuis, A.M, Burk, D.L.
Deposit date:2007-06-12
Release date:2007-11-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural Studies of the Final Enzyme in the alpha-Aminoadipate Pathway-Saccharopine Dehydrogenase from Saccharomyces cerevisiae
J.Mol.Biol., 373, 2007
8ISO
DownloadVisualize
BU of 8iso by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1
Descriptor: 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
8ISP
DownloadVisualize
BU of 8isp by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by cephalexin
Descriptor: (R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
8ISQ
DownloadVisualize
BU of 8isq by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by ampicillin
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, ...
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
8ISR
DownloadVisualize
BU of 8isr by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by cefaclor
Descriptor: (R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-chloro-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
8K55
DownloadVisualize
BU of 8k55 by Molmil
Crystal structure of sulfur transferase from Frondihabitans sp. PAMC28461 crystallized in the P1 space group
Descriptor: sulfur transferase
Authors:Nguyen, D.L, Do, H.
Deposit date:2023-07-21
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional characterization of sulfurtransferase from Frondihabitans sp. PAMC28461.
Plos One, 19, 2024
8K57
DownloadVisualize
BU of 8k57 by Molmil
Crystal structure of sulfur transferase from Frondihabitans sp. PAMC28461 crystallized in the I21 space group
Descriptor: sulfur transferase
Authors:Nguyen, D.L, Do, H.
Deposit date:2023-07-21
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural and functional characterization of sulfurtransferase from Frondihabitans sp. PAMC28461.
Plos One, 19, 2024
8J0J
DownloadVisualize
BU of 8j0j by Molmil
AtSLAC1 8D mutant in closed state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-11
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
8J1E
DownloadVisualize
BU of 8j1e by Molmil
AtSLAC1 in open state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-12
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
5GLD
DownloadVisualize
BU of 5gld by Molmil
Crystal structure of the class A beta-lactamase PenL-tTR11 in complex with CBA
Descriptor: Beta-lactamase, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE
Authors:Choi, J.M, Yi, H, Kim, H.S, Lee, S.H.
Deposit date:2016-07-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High adaptability of the omega loop underlies the substrate-spectrum-extension evolution of a class A beta-lactamase, PenL
Sci Rep, 6, 2016
5GLA
DownloadVisualize
BU of 5gla by Molmil
Crystal structure of the class A beta-lactamase PenL-tTR10 containing 10 residues insertion in omega-loop
Descriptor: Beta-lactamase
Authors:Choi, J.M, Yi, H, Kim, H.S, Lee, S.H.
Deposit date:2016-07-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High adaptability of the omega loop underlies the substrate-spectrum-extension evolution of a class A beta-lactamase, PenL
Sci Rep, 6, 2016
5GL9
DownloadVisualize
BU of 5gl9 by Molmil
Crystal structure of the class A beta-lactamase PenL
Descriptor: Beta-lactamase, GLYCEROL
Authors:Choi, J.M, Yi, H, Kim, H.S, Lee, S.H.
Deposit date:2016-07-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High adaptability of the omega loop underlies the substrate-spectrum-extension evolution of a class A beta-lactamase, PenL
Sci Rep, 6, 2016
5GLB
DownloadVisualize
BU of 5glb by Molmil
Crystal structure of the class A beta-lactamase PenL-tTR10 in complex with CBA
Descriptor: Beta-lactamase, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE
Authors:Choi, J.M, Yi, H, Kim, H.S, Lee, S.H.
Deposit date:2016-07-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High adaptability of the omega loop underlies the substrate-spectrum-extension evolution of a class A beta-lactamase, PenL
Sci Rep, 6, 2016
5GLC
DownloadVisualize
BU of 5glc by Molmil
Crystal structure of the class A beta-lactamase PenL-tTR11 containing 20 residues insertion in omega-loop
Descriptor: Beta-lactamase
Authors:Choi, J.M, Yi, H, Kim, H.S, Lee, S.H.
Deposit date:2016-07-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:High adaptability of the omega loop underlies the substrate-spectrum-extension evolution of a class A beta-lactamase, PenL
Sci Rep, 6, 2016
7XJT
DownloadVisualize
BU of 7xjt by Molmil
Catabolic ornithine carbamoyltransferases (OTCs) from Psychrobacter sp. PAMC 21119
Descriptor: Ornithine carbamoyltransferases, SULFATE ION
Authors:Do, H, Lee, J.H.
Deposit date:2022-04-18
Release date:2022-08-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Comparative structural insight into the unidirectional catalysis of ornithine carbamoyltransferases from Psychrobacter sp. PAMC 21119.
Plos One, 17, 2022
7X99
DownloadVisualize
BU of 7x99 by Molmil
Anabolic ornithine carbamoyltransferases (OTCs) from Psychrobacter sp. PAMC 21119
Descriptor: ornithine carbamoyltransferase
Authors:Do, H, Lee, J.H.
Deposit date:2022-03-15
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparative structural insight into the unidirectional catalysis of ornithine carbamoyltransferases from Psychrobacter sp. PAMC 21119.
Plos One, 17, 2022
5YSZ
DownloadVisualize
BU of 5ysz by Molmil
transcriptional regulator CelR-cellobiose complex
Descriptor: GLYCEROL, Transcriptional regulator, LacI family, ...
Authors:Fu, Y, Yeom, S.Y, Lee, D.H, Lee, S.G.
Deposit date:2017-11-16
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Structural and functional analyses of the cellulase transcription regulator CelR
FEBS Lett., 592, 2018
7C4X
DownloadVisualize
BU of 7c4x by Molmil
Crystal structure of germination protease from the spore-forming bacterium Paenisporosarcina sp. TG-20 in its inactive form
Descriptor: germination protease
Authors:Lee, J.H, Lee, C.W.
Deposit date:2020-05-18
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the psychrophilic germinal protease PaGPR and its autoinhibitory loop.
J.Microbiol, 58, 2020

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon