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2I57
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BU of 2i57 by Molmil
Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose
Descriptor: D-ALLOSE, L-rhamnose isomerase, ZINC ION
Authors:Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2006-08-24
Release date:2006-12-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
2I56
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BU of 2i56 by Molmil
Crystal structure of L-Rhamnose Isomerase from Pseudomonas stutzeri with L-Rhamnose
Descriptor: L-RHAMNOSE, L-rhamnose isomerase, ZINC ION
Authors:Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2006-08-24
Release date:2006-12-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
2KN2
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BU of 2kn2 by Molmil
Solution structure of the C-terminal domain of soybean calmodulin isoform 4 fused with the calmodulin-binding domain of NtMKP1
Descriptor: CALCIUM ION, Calmodulin
Authors:Ishida, H, Rainaldi, M, Vogel, H.J.
Deposit date:2009-08-12
Release date:2009-08-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural studies of soybean calmodulin isoform 4 bound to the calmodulin-binding domain of tobacco mitogen-activated protein kinase phosphatase-1 provide insights into a sequential target binding mode.
J.Biol.Chem., 284, 2009
2HCV
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BU of 2hcv by Molmil
Crystal structure of L-rhamnose isomerase from Pseudomonas stutzeri with metal ion
Descriptor: L-rhamnose isomerase, ZINC ION
Authors:Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2006-06-19
Release date:2006-12-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
3ALR
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BU of 3alr by Molmil
Crystal structure of Nanos
Descriptor: Nanos protein, ZINC ION
Authors:Hashimoto, H, Hara, K, Hishiki, A, Kawaguchi, S, Shichijo, N, Nakamura, K, Unzai, S, Tamaru, Y, Shimizu, T, Sato, M.
Deposit date:2010-08-06
Release date:2011-02-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of zinc-finger domain of Nanos and its functional implications
Embo Rep., 11, 2010
7CJ4
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BU of 7cj4 by Molmil
Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp.
Descriptor: Epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
7CJ7
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BU of 7cj7 by Molmil
Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex with L-tagatose
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)oxane-2,3,4,5-tetrol, Epimerase, L-sorbose, ...
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
7CJ9
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BU of 7cj9 by Molmil
Crystal structure of N-terminal His-tagged D-allulose 3-epimerase from Methylomonas sp. with additional C-terminal residues
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-fructose, ...
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
7CJ6
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BU of 7cj6 by Molmil
Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex with D-allulose
Descriptor: D-psicose, Epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
7CJ8
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BU of 7cj8 by Molmil
Crystal structure of N-terminal His-tagged D-allulose 3-epimerase from Methylomonas sp. in complex with D-allulose
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-psicose, Epimerase, ...
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
7CJ5
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BU of 7cj5 by Molmil
Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex with D-fructose
Descriptor: D-fructose, Epimerase, MAGNESIUM ION, ...
Authors:Yoshida, H, Yoshihara, A, Kamitori, S.
Deposit date:2020-07-09
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Febs Open Bio, 11, 2021
2FAU
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BU of 2fau by Molmil
Crystal structure of human vps26
Descriptor: GLYCEROL, Vacuolar protein sorting 26
Authors:Shi, H, Rojas, R, Bonifacino, J.S, Hurley, J.H.
Deposit date:2005-12-08
Release date:2006-05-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The retromer subunit Vps26 has an arrestin fold and binds Vps35 through its C-terminal domain.
Nat.Struct.Mol.Biol., 13, 2006
3W1E
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BU of 3w1e by Molmil
Structure of FlgT, a flagellar basal body component protein
Descriptor: Flagella basal-body protein
Authors:Terashima, H, Sakuma, M, Homma, M, Imada, K.
Deposit date:2012-11-14
Release date:2013-04-03
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insight into the assembly mechanism in the supramolecular rings of the sodium-driven Vibrio flagellar motor from the structure of FlgT
Proc.Natl.Acad.Sci.USA, 110, 2013
3W6N
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BU of 3w6n by Molmil
Crystal structure of human Dlp1 in complex with GMP-PN.Pi
Descriptor: AMINOPHOSPHONIC ACID-GUANYLATE ESTER, CALCIUM ION, Dynamin-1-like protein, ...
Authors:Kishida, H, Sugio, S.
Deposit date:2013-02-17
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of GTPase domain fused with minimal stalks from human dynamin-1-like protein (Dlp1) in complex with several nucleotide analogues
CURR TOP PEPT PROTEIN RES., 14, 2013
3W6P
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BU of 3w6p by Molmil
Crystal structure of human Dlp1 in complex with GDP.AlF4
Descriptor: CALCIUM ION, Dynamin-1-like protein, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kishida, H, Sugio, S.
Deposit date:2013-02-17
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of GTPase domain fused with minimal stalks from human dynamin-1-like protein (Dlp1) in complex with several nucleotide analogues
CURR TOP PEPT PROTEIN RES., 14, 2013
3W6O
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BU of 3w6o by Molmil
Crystal structure of human Dlp1 in complex with GMP-PCP
Descriptor: CALCIUM ION, Dynamin-1-like protein, MAGNESIUM ION, ...
Authors:Kishida, H, Sugio, S.
Deposit date:2013-02-17
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of GTPase domain fused with minimal stalks from human dynamin-1-like protein (Dlp1) in complex with several nucleotide analogues
CURR TOP PEPT PROTEIN RES., 14, 2013
2OU4
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BU of 2ou4 by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii
Descriptor: D-tagatose 3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2007-02-09
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUL
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BU of 2qul by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii at 1.79 A resolution
Descriptor: D-tagatose 3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2007-08-06
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUM
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BU of 2qum by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii with D-tagatose
Descriptor: D-tagatose, D-tagatose 3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2007-08-06
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
5XGC
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BU of 5xgc by Molmil
Crystal structure of SmgGDS-558
Descriptor: Rap1 GTPase-GDP dissociation stimulator 1
Authors:Shimizu, H, Toma-Fukai, S, Shimizu, T.
Deposit date:2017-04-13
Release date:2017-06-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based analysis of the guanine nucleotide exchange factor SmgGDS reveals armadillo-repeat motifs and key regions for activity and GTPase binding
J. Biol. Chem., 292, 2017
2MQE
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BU of 2mqe by Molmil
Solution structure of Escherichia coli Outer membrane protein A C-terminal domain
Descriptor: OmpA domain protein transmembrane region-containing protein
Authors:Ishida, H, Vogel, H.
Deposit date:2014-06-19
Release date:2014-09-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The periplasmic domain of Escherichia coli outer membrane protein A can undergo a localized temperature dependent structural transition.
Biochim.Biophys.Acta, 1838, 2014
5XH7
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BU of 5xh7 by Molmil
Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RR variant in complex with crRNA and target DNA (TCCA PAM)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
Authors:Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
Deposit date:2017-04-19
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5XH6
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BU of 5xh6 by Molmil
Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RVR variant in complex with crRNA and target DNA (TATA PAM)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
Authors:Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
Deposit date:2017-04-19
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5ZFS
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BU of 5zfs by Molmil
Crystal structure of Arthrobacter globiformis M30 sugar epimerase which can produce D-allulose from D-fructose
Descriptor: ACETATE ION, D-allulose-3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Gullapalli, P.K, Ohtani, K, Akimitsu, K, Izumori, K, Kamitori, S.
Deposit date:2018-03-07
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:X-ray structure of Arthrobacter globiformis M30 ketose 3-epimerase for the production of D-allulose from D-fructose.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZHX
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BU of 5zhx by Molmil
Crystal structure of SmgGDS-558 and farnesylated RhoA complex
Descriptor: FARNESYL, Rap1 GTPase-GDP dissociation stimulator 1, Transforming protein RhoA
Authors:Shimizu, H, Toma-Fukai, S, Shimizu, T.
Deposit date:2018-03-13
Release date:2018-09-05
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:GEF mechanism revealed by the structure of SmgGDS-558 and farnesylated RhoA complex and its implication for a chaperone mechanism.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

222036

數據於2024-07-03公開中

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