Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7ZYM
DownloadVisualize
BU of 7zym by Molmil
Crystal Structure of EGFR-T790M/C797S in Complex with Brigatinib
Descriptor: 5-chloro-N~4~-[2-(dimethylphosphoryl)phenyl]-N~2~-{2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl}pyrimidine-2,4-diamine, Epidermal growth factor receptor
Authors:Niggenaber, J, Kleinboelting, S, Mueller, M.P, Rauh, D.
Deposit date:2022-05-25
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Addressing the Osimertinib Resistance Mutation EGFR-L858R/C797S with Reversible Aminopyrimidines.
Acs Med.Chem.Lett., 14, 2023
7ZYP
DownloadVisualize
BU of 7zyp by Molmil
Crystal Structure of EGFR-T790M/C797S in Complex with Reversible Aminopyrimidine 9
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Epidermal growth factor receptor, propan-2-yl 2-[[4-(4-azanylpiperidin-1-yl)-2-methoxy-phenyl]amino]-4-(1-methylindol-3-yl)pyrimidine-5-carboxylate
Authors:Niggenaber, J, Kleinboelting, S, Mueller, M.P, Rauh, D.
Deposit date:2022-05-25
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Addressing the Osimertinib Resistance Mutation EGFR-L858R/C797S with Reversible Aminopyrimidines.
Acs Med.Chem.Lett., 14, 2023
6UQR
DownloadVisualize
BU of 6uqr by Molmil
Complex of IgE and Ligelizumab
Descriptor: IgE, Ligelizumab, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tarchevskaya, S.S, Kleinboelting, S, Jardetzky, T.S.
Deposit date:2019-10-21
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6502912 Å)
Cite:The mechanistic and functional profile of the therapeutic anti-IgE antibody ligelizumab differs from omalizumab.
Nat Commun, 11, 2020
7SHU
DownloadVisualize
BU of 7shu by Molmil
IgE-Fc in complex with omalizumab variant C02
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy constant epsilon, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHZ
DownloadVisualize
BU of 7shz by Molmil
IgE-Fc in complex with HAE
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHY
DownloadVisualize
BU of 7shy by Molmil
IgE-Fc in complex with omalizumab scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SI0
DownloadVisualize
BU of 7si0 by Molmil
IgE-Fc in complex with 813
Descriptor: 813 Variable fragment Heavy chain, 813 Variable fragment Light chain, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-12
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
1YGC
DownloadVisualize
BU of 1ygc by Molmil
Short Factor VIIa with a small molecule inhibitor
Descriptor: (R)-4-[2-(3-AMINO-BENZENESULFONYLAMINO)-1-(3,5-DIETHOXY-2-FLUOROPHENYL)-2-OXO-ETHYLAMINO]-2-HYDROXY-BENZAMIDINE, CALCIUM ION, Coagulation factor VII, ...
Authors:Olivero, A.G, Eigenbrot, C, Goldsmith, R, Robarge, K, Artis, D.R, Flygare, J, Rawson, T, Refino, C, Bunting, S, Kirchhofer, D.
Deposit date:2005-01-04
Release date:2005-01-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A selective, slow binding inhibitor of factor VIIa binds to a nonstandard active site conformation and attenuates thrombus formation in vivo.
J.Biol.Chem., 280, 2005
5AHW
DownloadVisualize
BU of 5ahw by Molmil
Crystal structure of universal stress protein MSMEG_3811 in complex with cAMP
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Adolph, R.S, Kleinboelting, S, Weyand, M, Steegborn, C.
Deposit date:2015-02-10
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Universal Stress Protein (Usp) in Mycobacteria Binds Camp
J.Biol.Chem., 290, 2015
6DRH
DownloadVisualize
BU of 6drh by Molmil
ADP-ribosyltransferase toxin/immunity pair
Descriptor: ADP-ribosyl-(Dinitrogen reductase) hydrolase, MAGNESIUM ION, PAAR repeat-containing protein, ...
Authors:Bosch, D.E, Ting, S, Allaire, M, Mougous, J.D.
Deposit date:2018-06-11
Release date:2018-10-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Bifunctional Immunity Proteins Protect Bacteria against FtsZ-Targeting ADP-Ribosylating Toxins.
Cell, 175, 2018
6DRE
DownloadVisualize
BU of 6dre by Molmil
ADP-ribosyltransferase toxin/immunity pair
Descriptor: ADP-ribosyl-(Dinitrogen reductase) hydrolase, MAGNESIUM ION, PAAR repeat-containing protein
Authors:Bosch, D.E, Ting, S, Allaire, M, Mougous, J.D.
Deposit date:2018-06-11
Release date:2018-10-31
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bifunctional Immunity Proteins Protect Bacteria against FtsZ-Targeting ADP-Ribosylating Toxins.
Cell, 175, 2018
1JPS
DownloadVisualize
BU of 1jps by Molmil
Crystal structure of tissue factor in complex with humanized Fab D3h44
Descriptor: immunoglobulin Fab D3H44, heavy chain, light chain, ...
Authors:Faelber, K, Kirchhofer, D, Presta, L, Kelley, R.F, Muller, Y.A.
Deposit date:2001-08-03
Release date:2002-02-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 1.85 A resolution crystal structures of tissue factor in complex with humanized Fab D3h44 and of free humanized Fab D3h44: revisiting the solvation of antigen combining sites.
J.Mol.Biol., 313, 2001
1JPT
DownloadVisualize
BU of 1jpt by Molmil
Crystal Structure of Fab D3H44
Descriptor: immunoglobulin Fab D3H44, heavy chain, immunoglobulin Fab D3h44, ...
Authors:Faelber, K, Kirchhofer, D, Presta, L, Kelley, R.F, Muller, Y.A.
Deposit date:2001-08-03
Release date:2002-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 1.85 A resolution crystal structures of tissue factor in complex with humanized Fab D3h44 and of free humanized Fab D3h44: revisiting the solvation of antigen combining sites.
J.Mol.Biol., 313, 2001
7ZYQ
DownloadVisualize
BU of 7zyq by Molmil
Crystal Structure of EGFR-T790M/V948R in Complex with Reversible Aminopyrimidine 13
Descriptor: CHLORIDE ION, Epidermal growth factor receptor, SODIUM ION, ...
Authors:Niggenaber, J, Mueller, M.P, Rauh, D.
Deposit date:2022-05-25
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Addressing the Osimertinib Resistance Mutation EGFR-L858R/C797S with Reversible Aminopyrimidines.
Acs Med.Chem.Lett., 14, 2023
8PQH
DownloadVisualize
BU of 8pqh by Molmil
PDGFRA T674I mutant kinase domain in complex with avapritinib
Descriptor: (1~{S})-1-(4-fluorophenyl)-1-[2-[4-[6-(1-methylpyrazol-4-yl)pyrrolo[2,1-f][1,2,4]triazin-4-yl]piperazin-1-yl]pyrimidin-5-yl]ethanamine, DI(HYDROXYETHYL)ETHER, Platelet-derived growth factor receptor alpha
Authors:Teuber, A, Kleinboelting, S, Mueller, M.P, Rauh, D.
Deposit date:2023-07-11
Release date:2023-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Avapritinib-based SAR studies unveil a binding pocket in KIT and PDGFRA.
Nat Commun, 15, 2024
8PQI
DownloadVisualize
BU of 8pqi by Molmil
PDGFRA T674I mutant kinase domain in complex with avapritinib derivative 9
Descriptor: (1~{S})-~{N}-ethyl-1-(4-fluorophenyl)-1-[2-[4-[6-(1-methylpyrazol-4-yl)pyrrolo[2,1-f][1,2,4]triazin-4-yl]piperazin-1-yl]pyrimidin-5-yl]ethanamine, DI(HYDROXYETHYL)ETHER, Platelet-derived growth factor receptor alpha
Authors:Teuber, A, Kleinboelting, S, Mueller, M.P, Rauh, D.
Deposit date:2023-07-11
Release date:2023-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Avapritinib-based SAR studies unveil a binding pocket in KIT and PDGFRA.
Nat Commun, 15, 2024
8PQ9
DownloadVisualize
BU of 8pq9 by Molmil
c-KIT kinase domain in complex with avapritinib
Descriptor: (1~{S})-1-(4-fluorophenyl)-1-[2-[4-[6-(1-methylpyrazol-4-yl)pyrrolo[2,1-f][1,2,4]triazin-4-yl]piperazin-1-yl]pyrimidin-5-yl]ethanamine, Mast/stem cell growth factor receptor Kit, SULFATE ION
Authors:Teuber, A, Kleinboelting, S, Mueller, M.P, Rauh, D.
Deposit date:2023-07-11
Release date:2023-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Avapritinib-based SAR studies unveil a binding pocket in KIT and PDGFRA.
Nat Commun, 15, 2024
7OVM
DownloadVisualize
BU of 7ovm by Molmil
Protein kinase MKK7 in complex with cyclobutyl-substituted indazole
Descriptor: Dual specificity mitogen-activated protein kinase kinase 7, ~{N}-[(1-cyclobutyl-1,2,3-triazol-4-yl)methyl]-3-(1~{H}-indazol-3-yl)-5-(propanoylamino)benzamide
Authors:Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
Deposit date:2021-06-15
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVN
DownloadVisualize
BU of 7ovn by Molmil
Protein kinase MKK7 in complex with tolyl-substituted indazole
Descriptor: 3-(1~{H}-indazol-3-yl)-~{N}-[[1-(2-methylphenyl)-1,2,3-triazol-4-yl]methyl]-5-(propanoylamino)benzamide, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
Deposit date:2021-06-15
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVJ
DownloadVisualize
BU of 7ovj by Molmil
Protein kinase MKK7 in complex with difluoro-phenethyltriazole-substituted pyrazolopyrimidine
Descriptor: 1-[(3~{R})-3-[4-azanyl-3-[1-[2,2-bis(fluoranyl)-2-phenyl-ethyl]-1,2,3-triazol-4-yl]pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
Deposit date:2021-06-15
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVL
DownloadVisualize
BU of 7ovl by Molmil
Protein kinase MKK7 in complex with methoxycyclohexyl-substituted indazole
Descriptor: 3-(2~{H}-indazol-3-yl)-~{N}-[[1-[(1~{R},2~{R})-2-methoxycyclohexyl]-1,2,3-triazol-4-yl]methyl]-5-(propanoylamino)benzamide, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
Deposit date:2021-06-15
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
6UEN
DownloadVisualize
BU of 6uen by Molmil
Cryo-EM structure of the respiratory syncytial virus RNA polymerase
Descriptor: RNA-directed RNA polymerase L, the phosphoprotein (P) of human respiratory syncytial virus
Authors:Cao, D, Gao, Y, Liang, B.
Deposit date:2019-09-22
Release date:2020-01-22
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Cryo-EM structure of the respiratory syncytial virus RNA polymerase.
Nat Commun, 11, 2020
7SHT
DownloadVisualize
BU of 7sht by Molmil
Structure of a partially disrupted IgE high affinity receptor complex bound to an omalizumab variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, ...
Authors:Pennington, L.F, Jardetzky, T.S.
Deposit date:2021-10-11
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (7.29 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
5CWA
DownloadVisualize
BU of 5cwa by Molmil
Structure of Anthranilate Synthase Component I (TrpE) from Mycobacterium tuberculosis with inhibitor bound
Descriptor: 3-{[(1Z)-1-carboxyprop-1-en-1-yl]oxy}-2-hydroxybenzoic acid, Anthranilate synthase component 1, GLYCEROL, ...
Authors:Johnston, J.M, Bashiri, G, Evans, G.L, Lott, J.S, Baker, E.N.
Deposit date:2015-07-28
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and inhibition of subunit I of the anthranilate synthase complex of Mycobacterium tuberculosis and expression of the active complex.
Acta Crystallogr.,Sect.D, 71, 2015
2X3A
DownloadVisualize
BU of 2x3a by Molmil
AsaP1 inactive mutant E294Q, an extracellular toxic zinc metalloendopeptidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Bogdanovic, X, Palm, G.J, Singh, R.K, Hinrichs, W.
Deposit date:2010-01-22
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Evidence of Intramolecular Propeptide Inhibition of the Aspzincin Metalloendopeptidase Asap1.
FEBS Lett., 590, 2016

222926

数据于2024-07-24公开中

PDB statisticsPDBj update infoContact PDBjnumon