Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3CGZ
DownloadVisualize
BU of 3cgz by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain
Descriptor: Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3CGY
DownloadVisualize
BU of 3cgy by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol
Descriptor: RADICICOL, Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3E66
DownloadVisualize
BU of 3e66 by Molmil
Crystal structure of the beta-finger domain of yeast Prp8
Descriptor: PRP8
Authors:Yang, K, Zhang, L, Xu, T, Heroux, A, Zhao, R.
Deposit date:2008-08-14
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the beta-finger domain of Prp8 reveals analogy to ribosomal proteins.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3N3Z
DownloadVisualize
BU of 3n3z by Molmil
Crystal structure of PDE9A (E406A) mutant in complex with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, CHLORIDE ION, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, ...
Authors:Hou, J, Luo, H.-B, Chen, Y, Xu, J, Zhao, R, Zou, L.
Deposit date:2010-05-21
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of PDE9A (E406A) mutation in complex with IBMX
To be Published
1OOI
DownloadVisualize
BU of 1ooi by Molmil
Crystal structure of LUSH from Drosophila melanogaster at pH 6.5
Descriptor: odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
1OOH
DownloadVisualize
BU of 1ooh by Molmil
Complex of Drosophila odorant binding protein LUSH with butanol
Descriptor: 1-BUTANOL, ACETATE ION, odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
1OOF
DownloadVisualize
BU of 1oof by Molmil
Complex of Drosophila odorant binding protein LUSH with ethanol
Descriptor: ACETATE ION, ETHANOL, odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
1OOG
DownloadVisualize
BU of 1oog by Molmil
Complex of Drosophila odorant binding protein LUSH with propanol
Descriptor: ACETATE ION, N-PROPANOL, odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
8JED
DownloadVisualize
BU of 8jed by Molmil
Crystal structure of mRNA cap (guanine-N7) methyltransferase E12 subunit from monkeypox virus and discovery of its inhibitors
Descriptor: mRNA-capping enzyme regulatory subunit OPG124
Authors:Wang, D, Zhao, R, Shu, W, Hu, W, Wang, M, Cao, J, Zhou, X.
Deposit date:2023-05-15
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of mRNA cap (guanine-N7) methyltransferase E12 subunit from monkeypox virus and discovery of its inhibitors.
Int.J.Biol.Macromol., 253, 2023
3QI3
DownloadVisualize
BU of 3qi3 by Molmil
Crystal structure of PDE9A(Q453E) in complex with inhibitor BAY73-6691
Descriptor: 1-(2-chlorophenyl)-6-[(2R)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Hou, J, Xu, J, Liu, M, Zhao, R, Lou, H, Ke, H.
Deposit date:2011-01-26
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural asymmetry of phosphodiesterase-9, potential protonation of a glutamic Acid, and role of the invariant glutamine.
Plos One, 6, 2011
3QI4
DownloadVisualize
BU of 3qi4 by Molmil
Crystal structure of PDE9A(Q453E) in complex with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Hou, J, Xu, J, Liu, M, Zhao, R, Lou, H, Ke, H.
Deposit date:2011-01-26
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural asymmetry of phosphodiesterase-9, potential protonation of a glutamic Acid, and role of the invariant glutamine.
Plos One, 6, 2011
8W2O
DownloadVisualize
BU of 8w2o by Molmil
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA, Pre-mRNA-processing factor 39, ...
Authors:Shi, S.S, Kuang, Z.L, Zhao, R.
Deposit date:2024-02-20
Release date:2024-05-15
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast.
Rna, 30, 2024
6N7P
DownloadVisualize
BU of 6n7p by Molmil
S. cerevisiae spliceosomal E complex (UBC4)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, Nuclear cap-binding protein complex subunit 1, Nuclear cap-binding protein subunit 2, ...
Authors:Liu, S, Li, X, Zhou, Z.H, Zhao, R.
Deposit date:2018-11-27
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A unified mechanism for intron and exon definition and back-splicing.
Nature, 573, 2019
6N7R
DownloadVisualize
BU of 6n7r by Molmil
Saccharomyces cerevisiae spliceosomal E complex (ACT1)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA, Pre-mRNA-processing factor 39, ...
Authors:Liu, S, Li, X, Zhou, Z.H, Zhao, R.
Deposit date:2018-11-28
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A unified mechanism for intron and exon definition and back-splicing.
Nature, 573, 2019
6BK8
DownloadVisualize
BU of 6bk8 by Molmil
S. cerevisiae spliceosomal post-catalytic P complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Lea1, ...
Authors:Liu, S, Li, X, Zhou, Z.H, Zhao, R.
Deposit date:2017-11-07
Release date:2018-02-21
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the yeast spliceosomal postcatalytic P complex.
Science, 358, 2017
5WWP
DownloadVisualize
BU of 5wwp by Molmil
Crystal structure of Middle East respiratory syndrome coronavirus helicase (MERS-CoV nsp13)
Descriptor: ORF1ab, SULFATE ION, ZINC ION
Authors:Hao, W, Wojdyla, J.A, Zhao, R, Han, R, Das, R, Zlatev, I, Manoharan, M, Wang, M, Cui, S.
Deposit date:2017-01-03
Release date:2017-07-05
Last modified:2021-09-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
2G6Q
DownloadVisualize
BU of 2g6q by Molmil
Crystal structure of ING2 PHD finger in complex with H3K4Me3 peptide
Descriptor: H3K4Me3 peptide, Inhibitor of growth protein 2, ZINC ION
Authors:Pena, P.V, Zhao, R, Kutateladze, T.G.
Deposit date:2006-02-24
Release date:2006-07-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2.
Nature, 442, 2006
6N7X
DownloadVisualize
BU of 6n7x by Molmil
S. cerevisiae U1 snRNP
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, Pre-mRNA-processing factor 39, Protein NAM8, ...
Authors:Li, X, Liu, S, Jiang, J, Zhang, L, Espinosa, S, Hill, R.C, Hansen, K.C, Zhou, Z.H, Zhao, R.
Deposit date:2018-11-28
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:CryoEM structure of Saccharomyces cerevisiae U1 snRNP offers insight into alternative splicing.
Nat Commun, 8, 2017
7VYV
DownloadVisualize
BU of 7vyv by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
7VZ3
DownloadVisualize
BU of 7vz3 by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
2L6J
DownloadVisualize
BU of 2l6j by Molmil
Tah1 complexed by MEEVD
Descriptor: C-terminus Hsp90 chaperone peptide MEEVD, TPR repeat-containing protein associated with Hsp90
Authors:Jimenez, B, Ugwu, F, Zhao, R, Orti, L, Houry, W.A, Pineda-Lucena, A.
Deposit date:2010-11-22
Release date:2011-12-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of minimal tetratricopeptide repeat domain protein Tah1 reveals mechanism of its interaction with Pih1 and Hsp90.
J.Biol.Chem., 287, 2012
2P8R
DownloadVisualize
BU of 2p8r by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8 carrying R2303K mutant
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-22
Release date:2007-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
2P87
DownloadVisualize
BU of 2p87 by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-21
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
8J5J
DownloadVisualize
BU of 8j5j by Molmil
The crystal structure of bat coronavirus RsYN04 RBD bound to the antibody S43
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, nano antibody S43
Authors:Zhao, R.C, Niu, S, Han, P, Qi, J.X, Gao, G.F, Wang, Q.H.
Deposit date:2023-04-23
Release date:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cross-species recognition of bat coronavirus RsYN04 and cross-reaction of SARS-CoV-2 antibodies against the virus.
Zool.Res., 44, 2023
8XS3
DownloadVisualize
BU of 8xs3 by Molmil
Structure of MPXV B6 and D68 fab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D68_heavy chain, ...
Authors:wu, L.L, Sun, J.Q.
Deposit date:2024-01-08
Release date:2024-06-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Two noncompeting human neutralizing antibodies targeting MPXV B6 show protective effects against orthopoxvirus infections.
Nat Commun, 15, 2024

225946

数据于2024-10-09公开中

PDB statisticsPDBj update infoContact PDBjnumon