Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
9EX1
DownloadVisualize
BU of 9ex1 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure B)
Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2024-04-05
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.785 Å)
Cite:Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 2024
9EX0
DownloadVisualize
BU of 9ex0 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure A)
Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex, ...
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2024-04-05
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 2024
9EX2
DownloadVisualize
BU of 9ex2 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure C)
Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex, ...
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2024-04-05
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.172 Å)
Cite:Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 2024
8CE2
DownloadVisualize
BU of 8ce2 by Molmil
X-ray structure of the adduct formed upon reaction of a B-DNA double helical dodecamer with dirhodium tetraacetate
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-02-01
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Dirhodium tetraacetate binding to a B-DNA double helical dodecamer probed by X-ray crystallography and mass spectrometry.
Dalton Trans, 52, 2023
2VB5
DownloadVisualize
BU of 2vb5 by Molmil
Solution structure of W60G mutant of human beta2-microglobulin
Descriptor: BETA-2-MICROGLOBULIN
Authors:Esposito, G, Corazza, A, Rennella, E, Gumral, D, Mimmi, M.C, Fogolari, F, Viglino, P, Raimondi, S, Giorgetti, S, Bolognesi, B, Merlini, G, Stoppini, M, Bellotti, V.
Deposit date:2007-09-06
Release date:2007-09-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Controlling Roles of Trp60 and Trp95 in Beta2-Microglobulin Function, Folding and Amyloid Aggregation Properties.
J.Mol.Biol., 378, 2008
8PTE
DownloadVisualize
BU of 8pte by Molmil
Polyoxidovanadate interaction with proteins: crystal structure of lysozyme bound to octadecavanadate ion (structure B)
Descriptor: Lysozyme C, NITRATE ION, Polyoxidovanadate complex, ...
Authors:Tito, G, Ferraro, G, Merlino, A.
Deposit date:2023-07-14
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Stabilization and Binding of [V 4 O 12 ] 4- and Unprecedented [V 20 O 54 (NO 3 )] n- to Lysozyme upon Loss of Ligands and Oxidation of the Potential Drug V IV O(acetylacetonato) 2.
Angew.Chem.Int.Ed.Engl., 62, 2023
7ZU6
DownloadVisualize
BU of 7zu6 by Molmil
Polyoxidovanadate interaction with proteins: crystal structure of lysozyme bound to tetra-vanadate ion (structure 1)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYCLO-TETRAMETAVANADATE, Lysozyme, ...
Authors:Tito, G, Merlino, A, Ferraro, G.
Deposit date:2022-05-11
Release date:2023-05-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.183 Å)
Cite:Stabilization and Binding of [V 4 O 12 ] 4- and Unprecedented [V 20 O 54 (NO 3 )] n- to Lysozyme upon Loss of Ligands and Oxidation of the Potential Drug V IV O(acetylacetonato) 2.
Angew.Chem.Int.Ed.Engl., 62, 2023
8RI5
DownloadVisualize
BU of 8ri5 by Molmil
Crystal structure of transplatin/B-DNA adduct obtained upon 48 h of soaking
Descriptor: AMMONIA, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-12-18
Release date:2024-02-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.415 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8RI3
DownloadVisualize
BU of 8ri3 by Molmil
Crystal structure of transplatin/B-DNA adduct obtained upon 7 days of soaking
Descriptor: AMMONIA, CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), ...
Authors:Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-12-18
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
1FTT
DownloadVisualize
BU of 1ftt by Molmil
THYROID TRANSCRIPTION FACTOR 1 HOMEODOMAIN (RATTUS NORVEGICUS)
Descriptor: THYROID TRANSCRIPTION FACTOR 1 HOMEODOMAIN
Authors:Fogolari, F, Esposito, G, Damante, G, Formisano, S, Di Lauro, R, Viglino, P.
Deposit date:1995-10-03
Release date:1996-01-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Analysis of the solution structure of the homeodomain of rat thyroid transcription factor 1 by 1H-NMR spectroscopy and restrained molecular mechanics.
Eur.J.Biochem., 241, 1996
4YZM
DownloadVisualize
BU of 4yzm by Molmil
Humanized Roco4 bound to LRRK2-In1
Descriptor: 2-[(2-methoxy-4-{[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl}phenyl)amino]-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, MAGNESIUM ION, Probable serine/threonine-protein kinase roco4
Authors:Gilsbach, B.K, Messias, A.C, Ito, G, Sattler, M, Alessi, D.R, Wittinghofer, A, Kortholt, A.
Deposit date:2015-03-25
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Characterization of LRRK2 Inhibitors.
J.Med.Chem., 58, 2015
4YZN
DownloadVisualize
BU of 4yzn by Molmil
Humanized Roco4 bound to Compound 19
Descriptor: (4-{[4-(cyclopropylamino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}-2-fluoro-5-methoxyphenyl)(morpholin-4-yl)methanone, Probable serine/threonine-protein kinase roco4
Authors:Gilsbach, B.K, Messias, A.C, Ito, G, Sattler, M, Alessi, D.R, Wittinghofer, A, Kortholt, A.
Deposit date:2015-03-25
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Characterization of LRRK2 Inhibitors.
J.Med.Chem., 58, 2015
8BOV
DownloadVisualize
BU of 8bov by Molmil
X-ray structure of the adduct formed upon reaction of the five-coordinate Pt(II) complex, 1-Me,Me, with HEWL at pH 7.5
Descriptor: 1-[1,3-dimethyl-4-(1~{H}-1,2,3-triazol-5-yl)imidazol-1-ium-2-yl]-1,2',11'-trimethyl-spiro[1$l^{6}-platinacycloprop-2-ene-1,15'-1,12-diaza-15$l^{6}-platinatetracyclo[10.2.1.0^{5,14}.0^{8,13}]pentadeca-2,4,6,8,10,13-hexaene], 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Ferraro, G, Tito, G, Merlino, A.
Deposit date:2022-11-15
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Impact of Hydrophobic Chains in Five-Coordinate Glucoconjugate Pt(II) Anticancer Agents.
Int J Mol Sci, 24, 2023
8BOY
DownloadVisualize
BU of 8boy by Molmil
X-ray structure of the adduct formed upon reaction of the five-coordinate Pt(II) complex, 1-Me,Me, with HEWL at pH 4.0
Descriptor: 1-[1,3-dimethyl-4-(1~{H}-1,2,3-triazol-5-yl)imidazol-1-ium-2-yl]-1,2',11'-trimethyl-spiro[1$l^{6}-platinacycloprop-2-ene-1,15'-1,12-diaza-15$l^{6}-platinatetracyclo[10.2.1.0^{5,14}.0^{8,13}]pentadeca-2,4,6,8,10,13-hexaene], Lysozyme C, NITRATE ION, ...
Authors:Ferraro, G, Tito, G, Merlino, A.
Deposit date:2022-11-15
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Impact of Hydrophobic Chains in Five-Coordinate Glucoconjugate Pt(II) Anticancer Agents.
Int J Mol Sci, 24, 2023
1Y9O
DownloadVisualize
BU of 1y9o by Molmil
1H NMR Structure of Acylphosphatase from the hyperthermophile Sulfolobus Solfataricus
Descriptor: Acylphosphatase
Authors:Corazza, A, Rosano, C, Pagano, K, Alverdi, V, Esposito, G, Capanni, C, Bemporad, F, Plakoutsi, G, Stefani, M, Chiti, F, Zuccotti, S, Bolognesi, M, Viglino, P.
Deposit date:2004-12-16
Release date:2005-11-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, conformational stability, and enzymatic properties of acylphosphatase from the hyperthermophile Sulfolobus solfataricus
Proteins, 62, 2006
8C63
DownloadVisualize
BU of 8c63 by Molmil
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 4 h of soaking
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, PLATINUM (II) ION, ...
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8C64
DownloadVisualize
BU of 8c64 by Molmil
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 48 h of soaking
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION, arsenoplatin-1
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8C62
DownloadVisualize
BU of 8c62 by Molmil
Crystal structure of cisplatin/B-DNA adduct
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
2KA3
DownloadVisualize
BU of 2ka3 by Molmil
Structure of EMILIN-1 C1Q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Corazza, A, Colebrooke, S.A, Cicero, D.O, Eliseo, T, Boyd, J, Doliana, R, Fogolari, F, Viglino, P, Colombatti, A, Campbell, I.D, Esposito, G.
Deposit date:2008-10-30
Release date:2008-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1
J.Biomol.Nmr, 43, 2009
2GV1
DownloadVisualize
BU of 2gv1 by Molmil
NMR solution structure of the Acylphosphatase from Eschaerichia Coli
Descriptor: Probable acylphosphatase
Authors:Pagano, K, Corazza, A, Viglino, P, Esposito, G.
Deposit date:2006-05-02
Release date:2006-10-31
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:NMR solution structure of the acylphosphatase from Escherichia coli.
J.Biomol.Nmr, 36, 2006
2OII
DownloadVisualize
BU of 2oii by Molmil
Structure of EMILIN-1 C1q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Colebrooke, S.A, Corazza, A, Cicero, D.O, Eliseo, T, Viglino, P, Campbell, I.D, Colombatti, A, Esposito, G.
Deposit date:2007-01-11
Release date:2008-01-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of the C-terminal domain of EMILIN-1
To be Published
2K27
DownloadVisualize
BU of 2k27 by Molmil
Solution structure of Human Pax8 Paired Box Domain
Descriptor: Paired box protein Pax-8
Authors:Codutti, L, Esposito, G, Corazza, A, Fogolari, F, Tell, G, Vascotto, C, van Ingen, H, Boelens, R, Viglino, P, Quadrifoglio, F.
Deposit date:2008-03-26
Release date:2008-09-30
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family.
J.Biol.Chem., 283, 2008
4GEQ
DownloadVisualize
BU of 4geq by Molmil
Crystal structure of the Spc24-Spc25/Cnn1 binding interface
Descriptor: GLYCEROL, Kinetochore protein SPC24, Kinetochore protein SPC25, ...
Authors:Malvezzi, F, Litos, G, Schleiffer, A, Heuck, A, Clausen, T, Westermann, S.
Deposit date:2012-08-02
Release date:2013-01-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A structural basis for kinetochore recruitment of the Ndc80 complex via two distinct centromere receptors.
Embo J., 32, 2013
1JNJ
DownloadVisualize
BU of 1jnj by Molmil
NMR solution structure of the human beta2-microglobulin
Descriptor: beta2-microglobulin
Authors:Verdone, G, Corazza, A, Viglino, P, Pettirossi, F, Giorgetti, S, Mangione, P, Andreola, A, Stoppini, M, Bellotti, V, Esposito, G.
Deposit date:2001-07-24
Release date:2002-02-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The solution structure of human beta2-microglobulin reveals the prodromes of its amyloid transition.
Protein Sci., 11, 2002
1PY4
DownloadVisualize
BU of 1py4 by Molmil
Beta2 microglobulin mutant H31Y displays hints for amyloid formations
Descriptor: Beta-2-microglobulin precursor
Authors:Rosano, C, Zuccotti, S, Mangione, P, Giorgetti, S, Bellotti, V, Pettirossi, F, Corazza, A, Viglino, P, Esposito, G, Bolognesi, M.
Deposit date:2003-07-08
Release date:2004-05-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular aggregation
J.Mol.Biol., 335, 2004

 

123>

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon