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2NBY
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BU of 2nby by Molmil
Solution structure of the J domain of EMCV IRES
Descriptor: IRES RNA (39-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NBX
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BU of 2nbx by Molmil
Solution structure of the J-K region of EMCV IRES
Descriptor: IRES RNA (108-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NBZ
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BU of 2nbz by Molmil
Solution structure of the K domain of EMCV IRES
Descriptor: IRES RNA 40-MER
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NC0
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BU of 2nc0 by Molmil
Solution structure of the St domain of EMCV IRES
Descriptor: IRES RNA (28-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NC1
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BU of 2nc1 by Molmil
Solution structure of the delta-J-delta-K domain of EMCV IRES
Descriptor: IRES RNA (67-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
6KR8
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BU of 6kr8 by Molmil
Structure of the beta2 adrenergic receptor in the full agonist bound state
Descriptor: beta 2 adrenergic receptor
Authors:Imai, S, Shimada, I.
Deposit date:2019-08-21
Release date:2020-01-29
Last modified:2020-04-08
Method:SOLUTION NMR
Cite:Structural equilibrium underlying ligand-dependent activation of beta2-adrenoreceptor.
Nat.Chem.Biol., 16, 2020
8HUJ
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BU of 8huj by Molmil
Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A
Descriptor: Eukaryotic initiation factor 4A-I, Eukaryotic translation initiation factor 4 gamma 1, IRES RNA (J-K-St), ...
Authors:Suzuki, H, Fujiyoshi, Y, Imai, S, Shimada, I.
Deposit date:2022-12-24
Release date:2023-08-02
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor.
Nat Commun, 14, 2023
8J7R
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BU of 8j7r by Molmil
Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A (J-K-St/eIF4G focused)
Descriptor: Eukaryotic translation initiation factor 4 gamma 1, IRES RNA (J-K-St), MAGNESIUM ION
Authors:Suzuki, H, Fujiyoshi, Y, Imai, S, Shimada, I.
Deposit date:2023-04-28
Release date:2023-08-02
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor.
Nat Commun, 14, 2023
6IES
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BU of 6ies by Molmil
Onion lachrymatory factor synthase (LFS) containing (E)-2-propen 1-ol (crotyl alcohol)
Descriptor: (2E)-but-2-en-1-ol, Lachrymatory-factor synthase
Authors:Sato, Y, Arakawa, T, Takabe, J, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2018-09-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase.
Acs Catalysis, 10, 2020
5GTF
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BU of 5gtf by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing glycerol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Lachrymatory-factor synthase, ...
Authors:Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTE
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BU of 5gte by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS), solute-free form
Descriptor: Lachrymatory-factor synthase, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTG
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BU of 5gtg by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing 1,2-propanediol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lachrymatory-factor synthase, S-1,2-PROPANEDIOL, ...
Authors:Arakawa, T, Sato, Y, Takabe, J, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
8K9L
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BU of 8k9l by Molmil
Full agonist- and positive allosteric modulator-bound mu-type opioid receptor-G protein complex
Descriptor: (2~{S})-2-(3-bromanyl-4-methoxy-phenyl)-3-(4-chlorophenyl)sulfonyl-1,3-thiazolidine, DAMGO, G protein subunit alpha i3, ...
Authors:Hisano, T, Uchikubo-Kamo, T, Shirouzu, M, Imai, S, Kaneko, S, Shimada, I.
Deposit date:2023-08-01
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural and dynamic insights into the activation of the mu-opioid receptor by an allosteric modulator.
Nat Commun, 15, 2024
8K9K
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BU of 8k9k by Molmil
Full agonist-bound mu-type opioid receptor-G protein complex
Descriptor: DAMGO, G protein subunit alpha i3, Guanine nucleotide binding protein, ...
Authors:Hisano, T, Uchikubo-Kamo, T, Shirouzu, M, Imai, S, Kaneko, S, Shimada, I.
Deposit date:2023-08-01
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural and dynamic insights into the activation of the mu-opioid receptor by an allosteric modulator.
Nat Commun, 15, 2024
7BWI
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BU of 7bwi by Molmil
Solution structure of recombinant APETx1
Descriptor: Kappa-actitoxin-Ael2a
Authors:Matsumura, K, Kobayashi, N, Kurita, J, Nishimura, Y, Yokogawa, M, Imai, S, Shimada, I, Osawa, M.
Deposit date:2020-04-14
Release date:2020-12-23
Last modified:2021-07-14
Method:SOLUTION NMR
Cite:Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization.
Bmc Mol Cell Biol, 22, 2021
3BQ7
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BU of 3bq7 by Molmil
SAM domain of Diacylglycerol Kinase delta1 (E35G)
Descriptor: Diacylglycerol kinase delta
Authors:Knight, M.J, Bowie, J.U, Sawaya, M.R.
Deposit date:2007-12-19
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Regulation of Enzyme Localization by Polymerization: Polymer Formation by the SAM Domain of Diacylglycerol Kinase delta1
Structure, 16, 2008
2E7A
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BU of 2e7a by Molmil
TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity
Descriptor: Tumor necrosis factor
Authors:Mukai, Y, Yamagata, Y, Tsutsumi, Y.
Deposit date:2007-01-09
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Creation and X-ray structure analysis of the tumor necrosis factor receptor-1-selective mutant of a tumor necrosis factor-alpha antagonist
J.Biol.Chem., 283, 2008
8BSS
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BU of 8bss by Molmil
Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Oi, K.K, Jurt, S, Moehle, K, Zerbe, O.
Deposit date:2022-11-26
Release date:2023-06-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
7QS6
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BU of 7qs6 by Molmil
Solution structure of thanatin-like derivative 7 in complex with E.coli LptA
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Moehle, K, Zerbe, O.
Deposit date:2022-01-12
Release date:2023-05-10
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
7ZED
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BU of 7zed by Molmil
Solution structure of thanatin-like derivative 7 in complex with E.coli LptA mutant Q62L
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Moehle, K, Zerbe, O.
Deposit date:2022-03-31
Release date:2023-06-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
7ZAX
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BU of 7zax by Molmil
Solution structure of thanatin-like derivative 7 in complex with K. pneumoniae LptA
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Oi, K.K, Moehle, K, Zerbe, O.
Deposit date:2022-03-22
Release date:2023-06-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023

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