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7D91
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BU of 7d91 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ (P4(3)2(1)2 symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D92
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BU of 7d92 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P4(3)2(1)2 symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D93
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BU of 7d93 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P2(1)2(1)2(1) symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
1V84
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BU of 1v84 by Molmil
Crystal structure of human GlcAT-P in complex with N-acetyllactosamine, Udp, and Mn2+
Descriptor: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID, MANGANESE (II) ION, ...
Authors:Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
Deposit date:2003-12-27
Release date:2004-05-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
1V83
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BU of 1v83 by Molmil
Crystal structure of human GlcAT-P in complex with Udp and Mn2+
Descriptor: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID, MANGANESE (II) ION, ...
Authors:Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
Deposit date:2003-12-27
Release date:2004-05-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
1V82
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BU of 1v82 by Molmil
Crystal structure of human GlcAT-P apo form
Descriptor: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID
Authors:Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
Deposit date:2003-12-27
Release date:2004-05-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
2ZBE
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BU of 2zbe by Molmil
Calcium pump crystal structure with bound BeF3 in the absence of calcium and TG
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
Authors:Toyoshima, C, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-12-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZBF
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BU of 2zbf by Molmil
Calcium pump crystal structure with bound BeF3 and TG in the absence of calcium
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Toyoshima, C, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-12-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZBG
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BU of 2zbg by Molmil
Calcium pump crystal structure with bound AlF4 and TG in the absence of calcium
Descriptor: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Toyoshima, C, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-12-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZFA
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BU of 2zfa by Molmil
Structure of Lactate Oxidase at pH4.5 from AEROCOCCUS VIRIDANS
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, Lactate oxidase
Authors:Furuichi, M, Balasundaresan, D, Suzuki, N, Yoshida, Y, Minagawa, H, Kaneko, H, Waga, I, Kumar, P.K.R, Mizuno, H.
Deposit date:2007-12-26
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:X-ray structures of Aerococcus viridans lactate oxidase and its complex with D-lactate at pH 4.5 show an alpha-hydroxyacid oxidation mechanism
J.Mol.Biol., 378, 2008
3A5T
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BU of 3a5t by Molmil
Crystal structure of MafG-DNA complex
Descriptor: 5'-D(*CP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*G)-3', MAGNESIUM ION, ...
Authors:Kurokawa, H, Motohashi, H, Sueno, S, Kimura, M, Takagawa, H, Kanno, Y, Yamamoto, M, Tanaka, T.
Deposit date:2009-08-11
Release date:2009-10-13
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis of Alternative DNA Recognition by Maf Transcription Factors
Mol.Cell.Biol., 29, 2009
2ZBD
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BU of 2zbd by Molmil
Crystal Structure of the SR Calcium Pump with Bound Aluminium Fluoride, ADP and Calcium
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Toyoshima, C, Nomura, H, Tsuda, T, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues
Nature, 432, 2004
2ZXE
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BU of 2zxe by Molmil
Crystal structure of the sodium - potassium pump in the E2.2K+.Pi state
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Shinoda, T, Ogawa, H, Cornelius, F, Toyoshima, C.
Deposit date:2008-12-22
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the sodium - potassium pump at 2.4 A resolution
Nature, 459, 2009
4YCL
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BU of 4ycl by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA
Descriptor: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Ogawa, H, Takahashi, M, Kondou, Y, Toyoshima, C.
Deposit date:2015-02-20
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZE5
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BU of 2ze5 by Molmil
Crystal Structure of adenosine phosphate-isopentenyltransferase
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Isopentenyl transferase
Authors:Sakakibara, H.
Deposit date:2007-12-06
Release date:2008-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural insight into the reaction mechanism and evolution of cytokinin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZE8
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BU of 2ze8 by Molmil
Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with diphosphate
Descriptor: Isopentenyl transferase, PYROPHOSPHATE 2-
Authors:Sakakibara, H.
Deposit date:2007-12-06
Release date:2008-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into the reaction mechanism and evolution of cytokinin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZE6
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BU of 2ze6 by Molmil
Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with substrate analog, DMASPP
Descriptor: ADENOSINE MONOPHOSPHATE, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Isopentenyl transferase
Authors:Sakakibara, H.
Deposit date:2007-12-06
Release date:2008-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the reaction mechanism and evolution of cytokinin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZE7
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BU of 2ze7 by Molmil
Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with zinc ion and substrate analog, DMASPP
Descriptor: ADENOSINE MONOPHOSPHATE, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Isopentenyl transferase, ...
Authors:Sakakibara, H.
Deposit date:2007-12-06
Release date:2008-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the reaction mechanism and evolution of cytokinin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3NMR
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BU of 3nmr by Molmil
Crystal Structure of CUGBP1 RRM1/2-RNA Complex
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-22
Release date:2010-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNC
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BU of 3nnc by Molmil
Crystal Structure of CUGBP1 RRM1/2-RNA Complex
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*UP*GP*UP*GP*UP*G)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2005 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNA
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BU of 3nna by Molmil
Crystal Structure of CUGBP1 RRM1/2-RNA Complex
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNH
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BU of 3nnh by Molmil
Crystal Structure of the CUGBP1 RRM1 with GUUGUUUUGUUU RNA
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7501 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
1VFP
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BU of 1vfp by Molmil
Crystal structure of the SR CA2+-ATPase with bound AMPPCP
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Toyoshima, C, Mizutani, T.
Deposit date:2004-04-18
Release date:2004-07-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the calcium pump with a bound ATP analogue.
Nature, 430, 2004
6LEH
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BU of 6leh by Molmil
Crystal structure of Autotaxin in complex with an inhibitor
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Nishimasu, H, Osamu, N.
Deposit date:2019-11-25
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of PotentIn VivoAutotaxin Inhibitors that Bind to Both Hydrophobic Pockets and Channels in the Catalytic Domain.
J.Med.Chem., 63, 2020
8JYG
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BU of 8jyg by Molmil
Crystal structure of Human HPSE1 in complex with inhibitor
Descriptor: (5~{S},6~{R},7~{S},8~{S})-6,7,8-tris(oxidanyl)-2-[2-(3-phenoxyphenyl)ethyl]-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mima, M, Fujimoto, N, Imai, Y.
Deposit date:2023-07-03
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based lead optimization to improve potency and selectivity of a novel tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid series of heparanase-1 inhibitor.
Bioorg.Med.Chem., 93, 2023

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