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5KMQ
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BU of 5kmq by Molmil
The structure of I379E variant of type II NADH dehydrogenase from Caldalkalibacillus thermarum
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
6NZX
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BU of 6nzx by Molmil
Hadesarchaea YNP_N21 cytochrome b5 domain protein (KUO41884.1)
Descriptor: Cytochrome B5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Teakel, S.L, Marama, M.S, Aragao, D, Forwood, J.K, Cahill, M.A.
Deposit date:2019-02-14
Release date:2019-03-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hadesarchaea YNP_N21 cytochrome b5 domain protein (KUO41884.1)
To Be Published
5KMP
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BU of 5kmp by Molmil
The structure of G164E variant of type II NADH dehydrogenase from Caldalkalibacillus thermarum
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5KMR
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BU of 5kmr by Molmil
The structure of type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with NAD+ at 3.0 angstrom resolution.
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5KMS
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BU of 5kms by Molmil
The structure of type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with NAD+ at 2.5 angstrom resolution.
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
6VZ6
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BU of 6vz6 by Molmil
Methanococcoides burtonii cytochrome b5 domain protein (WP 011499504.1)
Descriptor: Cytochrome b5-domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Teakel, S.L, Forwood, J.K, Aragao, D, Cahill, M.A, Marama, M.
Deposit date:2020-02-27
Release date:2020-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Methanococcoides burtonii cytochrome b5 domain protein (WP 011499504.1)
To Be Published
6WX7
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BU of 6wx7 by Molmil
SOX2 bound to Importin-alpha 2
Descriptor: Importin subunit alpha-1, Transcription factor SOX-2
Authors:Bikshapathi, J, Stewart, M, Forwood, J.K, Aragao, D, Roman, N.
Deposit date:2020-05-09
Release date:2020-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for nuclear import selectivity of pioneer transcription factor SOX2.
Nat Commun, 12, 2021
6WX8
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BU of 6wx8 by Molmil
SOX2 bound to Importin-alpha 3
Descriptor: Importin subunit alpha-3, SULFATE ION, Transcription factor SOX-2
Authors:Bikshapathi, J, Stewart, M, Forwood, J.K, Aragao, D, Roman, N.
Deposit date:2020-05-10
Release date:2020-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for nuclear import selectivity of pioneer transcription factor SOX2.
Nat Commun, 12, 2021
6WX9
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BU of 6wx9 by Molmil
SOX2 bound to Importin-alpha 5
Descriptor: Importin subunit alpha-5, Transcription factor SOX-2
Authors:Bikshapathi, J, Stewart, M, Forwood, J.K, Aragao, D, Roman, N.
Deposit date:2020-05-10
Release date:2020-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for nuclear import selectivity of pioneer transcription factor SOX2.
Nat Commun, 12, 2021
3PDS
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BU of 3pds by Molmil
Irreversible Agonist-Beta2 Adrenoceptor Complex
Descriptor: 8-hydroxy-5-[(1R)-1-hydroxy-2-({2-[3-methoxy-4-(3-sulfanylpropoxy)phenyl]ethyl}amino)ethyl]quinolin-2(1H)-one, CHOLESTEROL, Fusion protein Beta-2 adrenergic receptor/Lysozyme, ...
Authors:Rosenbaum, D.M, Zhang, C, Lyons, J.A, Holl, R, Aragao, D, Arlow, D.H, Rasmussen, S.G.F, Choi, H.-J, DeVree, B.T, Sunahara, R.K, Chae, P.S, Gellman, S.H, Dror, R.O, Shaw, D.E, Weis, W.I, Caffrey, M, Gmeiner, P, Kobilka, B.K.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and function of an irreversible agonist-beta(2) adrenoceptor complex
Nature, 469, 2011
2MQA
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BU of 2mqa by Molmil
3D structure of RP domain of MiSp
Descriptor: Minor ampullate fibroin 1
Authors:Yang, D, Gao, Z.
Deposit date:2014-06-16
Release date:2015-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:3D structure of RP domain of MiSp
To be Published
8WSP
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BU of 8wsp by Molmil
Crystal structure of SFTSV Gn and antibody SF5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ab5-H, Ab5-L, ...
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WSN
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BU of 8wsn by Molmil
Crystal structure of SFTSV Gn and antibody SF1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ab1-H, ...
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WSU
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BU of 8wsu by Molmil
Crystal structure of SFTSV Gc and antibody
Descriptor: Ab-H, Ab-L, Glycoprotein C
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WQW
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BU of 8wqw by Molmil
Cryo-EM structure of bsAb3 Fab-Gn-Gc complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein C, Glycoprotein N, ...
Authors:Wu, Y, Sun, J.Q.
Deposit date:2023-10-12
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
3I2J
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BU of 3i2j by Molmil
Cocaine Esterase, wild type, without a ligand
Descriptor: CHLORIDE ION, Cocaine esterase, GLYCEROL, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2I
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BU of 3i2i by Molmil
Cocaine Esterase with mutation T172R, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2F
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BU of 3i2f by Molmil
Cocaine Esterase with mutations T172R / G173Q, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2G
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BU of 3i2g by Molmil
Cocaine Esterase with mutation G173Q, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2K
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BU of 3i2k by Molmil
Cocaine Esterase, wild type, bound to a DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2H
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BU of 3i2h by Molmil
Cocaine Esterase with mutation L169K, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
7FD2
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BU of 7fd2 by Molmil
Cryo-EM structure of an alphavirus, Getah virus
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, Z, Liu, C, Wang, A.
Deposit date:2021-07-15
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
Cell Discov, 8, 2022
8GZB
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BU of 8gzb by Molmil
SARS-CoV-2 3CLpro
Descriptor: 1,2-ETHANEDIOL, 2-(4-chlorophenyl)-1,3,4-oxadiazole, 3C-like proteinase nsp5
Authors:Wang, F, Cen, Y.X, Tian, P.
Deposit date:2022-09-26
Release date:2023-09-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Nature-inspired catalytic asymmetric rearrangement of cyclopropylcarbinyl cation.
Sci Adv, 9, 2023
6JQ9
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BU of 6jq9 by Molmil
Crystal structure of a lyase from Alteromonas sp.
Descriptor: CALCIUM ION, SULFATE ION, Short ulvan lyase
Authors:Qin, H.M, Guo, Q.Q.
Deposit date:2019-03-29
Release date:2020-04-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Biochemical characterization and structural analysis of ulvan lyase from marine Alteromonas sp. reveals the basis for its salt tolerance.
Int.J.Biol.Macromol., 147, 2020
4UXZ
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BU of 4uxz by Molmil
Structure of delta7-DgkA-syn in 7.9 MAG to 2.18 angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, (2S)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, ACETATE ION, ...
Authors:Li, D, Howe, N, Caffrey, M.
Deposit date:2014-08-27
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015

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