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2ZAJ
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BU of 2zaj by Molmil
Solution structure of the short-isoform of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (MAGI-1)
Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1
Authors:Ohnishi, S, Tochio, N, Tomizawa, T, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-05
Release date:2008-04-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the short-isoform of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (MAGI-1)
To be Published
2ZCE
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BU of 2zce by Molmil
Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with pyrrolysine and an ATP analogue
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PYRROLYSINE, ...
Authors:Yanagisawa, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies on Multiple Conformational States of Active-site Loops in Pyrrolysyl-tRNA Synthetase
J.Mol.Biol., 378, 2008
2ZBP
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BU of 2zbp by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-L-methionine
Descriptor: Ribosomal protein L11 methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-11-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
2ZCF
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BU of 2zcf by Molmil
Mutational study on Alpha-Gln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Descriptor: FE (III) ION, MAGNESIUM ION, Nitrile hydratase subunit alpha, ...
Authors:Takarada, H, Kawano, Y, Hashimoto, K, Nakayama, H, Ueda, S, Yohda, M, Kamiya, N, Dohmae, N, Maeda, M, Odaka, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2007-11-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Mutational study on alphaGln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Biosci.Biotechnol.Biochem., 70, 2006
1V6H
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BU of 1v6h by Molmil
The Trimeric Structure Of Divalent Cation Tolerance Protein CutA1 From Thermus Thermophilus HB8
Descriptor: Divalent Cation Tolerance Protein CutA1, SULFATE ION
Authors:Bagautdinov, B, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-29
Release date:2003-12-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly.
Acta Crystallogr.,Sect.F, 70, 2014
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
Authors:Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-12-30
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
2DQ4
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BU of 2dq4 by Molmil
Crystal structure of threonine 3-dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
3A3U
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BU of 3a3u by Molmil
Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, L(+)-TARTARIC ACID, Menaquinone biosynthetic enzyme, ...
Authors:Arai, R, Nishino, A, Nagano, K, Uchikubo-Kamo, T, Katsura, K, Nishimoto, M, Toyama, M, Terada, T, Kuramitsu, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-06-20
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
3A1P
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BU of 3a1p by Molmil
Structure of Ribosome maturation protein RimM and Ribosomal protein S19
Descriptor: 30S ribosomal protein S19, Ribosome maturation factor rimM, UNKNOWN ATOM OR ION
Authors:Kaminishi, T, Takemoto, C, Tatsuguchi, A, Kawazoe, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-04-21
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Ribosome maturation protein RimM and Ribosomal protein S19
To be Published
1VCT
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BU of 1vct by Molmil
Crystal structure of putative potassium channel related protein from Pyrococcus horikoshii
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Inagaki, E, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-12
Release date:2005-03-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of putative potassium channel related protein from Pyrococcus horikoshii
To be Published
1VEK
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BU of 1vek by Molmil
Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
Descriptor: ubiquitin-specific protease 14, putative
Authors:Higuchi, Y, Abe, T, Hirota, H, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-31
Release date:2004-09-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
To be Published
3AAM
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BU of 3aam by Molmil
Crystal structure of endonuclease IV from Thermus thermophilus HB8
Descriptor: Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION
Authors:Asano, R, Ishikawa, H, Nakane, S, Baba, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
2E5W
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BU of 2e5w by Molmil
Crystal structure of spermidine synthase from Pyrococcus horikoshii OT3
Descriptor: 1-{4-[(3-aminopropyl)amino]butyl}guanidine, 5'-DEOXY-5'-METHYLTHIOADENOSINE, ACETATE ION, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-25
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of spermidine synthase from Pyrococcus horikoshii OT3
To be Published
2E54
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BU of 2e54 by Molmil
Crystal structure of acetylornithine aminotransferase from Thermotoga maritima
Descriptor: 1,2-ETHANEDIOL, Acetylornithine aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-19
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of acetylornithine aminotransferase from Thermotoga maritima
To be Published
2Z16
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BU of 2z16 by Molmil
Crystal structure of Matrix protein 1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
Descriptor: Matrix protein 1
Authors:Saijo, S, Kishishita, S, Uchikubo-Kamo, T, Terada, T, Shirouzu, M, Ito, H, Ito, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of Matrix protein 1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
To be Published
3AJD
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BU of 3ajd by Molmil
Crystal structure of ATRM4
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Putative methyltransferase MJ0026
Authors:Hirano, M, Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-06-01
Release date:2010-06-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.
J.Mol.Biol., 401, 2010
3ATV
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BU of 3atv by Molmil
Crystal structure of human Hsp70 NBD in the ADP-bound and Mg ion-free state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Heat shock 70 kDa protein 1A/1B, ...
Authors:Arakawa, A, Handa, N, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-13
Release date:2011-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Biochemical and structural studies on the high affinity of Hsp70 for ADP.
Protein Sci., 20, 2011
3ATU
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BU of 3atu by Molmil
Crystal structure of human Hsp70 NBD in the ADP- and Mg ion-bound state
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, ADENOSINE-5'-DIPHOSPHATE, Heat shock 70 kDa protein 1A/1B, ...
Authors:Arakawa, A, Handa, N, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-13
Release date:2011-12-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Biochemical and structural studies on the high affinity of Hsp70 for ADP.
Protein Sci., 20, 2011
3AU3
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BU of 3au3 by Molmil
Crystal structure of armadillo repeat domain of APC
Descriptor: Adenomatous polyposis coli protein
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2011-11-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the armadillo repeat domain of adenomatous polyposis coli and its complex with the tyrosine-rich domain of sam68
Structure, 19, 2011
2ZBR
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BU of 2zbr by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-ornithine
Descriptor: Ribosomal protein L11 methyltransferase, SINEFUNGIN
Authors:Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-11-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
2ZQQ
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BU of 2zqq by Molmil
Crystal structure of human AUH (3-methylglutaconyl-coa hydratase) mixed with (AUUU)24A RNA
Descriptor: Methylglutaconyl-CoA hydratase
Authors:Kurimoto, K, Kuwasako, K, Muto, Y, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-08-16
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:AU-rich RNA-binding induces changes in the quaternary structure of AUH
Proteins, 75, 2009
1VFG
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BU of 1vfg by Molmil
Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, RNA (75-MER), poly A polymerase
Authors:Tomita, K, Fukai, S, Ishitani, R, Ueda, T, Takeuchi, N, Vassylyev, D.G, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-13
Release date:2004-08-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for template-independent RNA polymerization.
Nature, 430, 2004
2ZKY
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BU of 2zky by Molmil
Crystal structure of human Cu-Zn superoxide dismutase mutant G93A
Descriptor: Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Yoshikawa, S, Kukimoto-Niino, M, Ito, K, Shirouzu, M, Urushitani, M, Takahashi, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-03-31
Release date:2009-03-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human Cu-Zn superoxide dismutase mutant G93A
To be Published
2ZOD
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BU of 2zod by Molmil
Crystal structure of selenophosphate synthetase from Aquifex aeolicus
Descriptor: SULFATE ION, Selenide, water dikinase
Authors:Sekine, S.I, Matsumoto, E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-09
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs.
J.Mol.Biol., 385, 2009
2ZO7
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BU of 2zo7 by Molmil
Crystal Structure of a Kusabira-Cyan Mutant (KCY-R1), a Cyan/Green-Emitting GFP-Like Protein
Descriptor: CYAN/GREEN-EMITTING GFP-LIKE PROTEIN, KUSABIRA-CYAN MUTANT (KCY-R1)
Authors:Kikuchi, A, Fukumura, E, Karasawa, S, Miyawaki, A, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-06
Release date:2009-05-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of a new cyan fluorescent protein and its hue-shifted variants
Biochemistry, 48, 2009

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