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7YHG
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BU of 7yhg by Molmil
Solution structure of S-mono-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
Descriptor: Exoglucanase 1, alpha-D-mannopyranose
Authors:Chen, C, Feng, Y, Tan, Z.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHH
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BU of 7yhh by Molmil
Solution structure of S-di-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
Descriptor: Exoglucanase 1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Chen, C, Feng, Y, Tan, Z.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2023-09-20
Method:SOLUTION NMR
Cite:Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHF
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BU of 7yhf by Molmil
Solution structure of S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
Descriptor: Exoglucanase 1
Authors:Chen, C, Feng, Y, Tan, Z.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7YHI
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BU of 7yhi by Molmil
Solution structure of O-di-mannosylated carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei
Descriptor: Exoglucanase 1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Chen, C, Feng, Y, Tan, Z.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2023-09-20
Method:SOLUTION NMR
Cite:Structural insight into why S-linked glycosylation cannot adequately mimic the role of natural O-glycosylation.
Int.J.Biol.Macromol., 253, 2023
7XUF
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BU of 7xuf by Molmil
Cryo-EM structure of the AKT1-AtKC1 complex from Arabidopsis thaliana
Descriptor: POTASSIUM ION, Potassium channel AKT1, Potassium channel KAT3
Authors:Yang, G.H, Lu, Y.M, Jia, Y.T, Yang, F, Zhang, Y.M, Xu, X, Li, X.M, Lei, J.L.
Deposit date:2022-05-18
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for the activity regulation of a potassium channel AKT1 from Arabidopsis.
Nat Commun, 13, 2022
7YMS
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BU of 7yms by Molmil
Cryo-EM structure of Coxsackievirus A16 in complex with a neutralizing antibody 9B5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-07-29
Release date:2022-08-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YRH
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BU of 7yrh by Molmil
Cryo-EM structure of compact coxsackievirus A16 empty particle in complex with a neutralizing antibody 9B5
Descriptor: Capsid protein VP1, Capsid protein VP3, Genome polyprotein, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-08-10
Release date:2022-09-14
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YRF
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BU of 7yrf by Molmil
Cryo-EM structure of compact CA16 empty particle in complex with a neutralizing antibody 8C4
Descriptor: Capsid protein VP3, Genome polyprotein, Light chain of chain, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-08-09
Release date:2022-09-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YV7
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BU of 7yv7 by Molmil
Cryo-EM structure of expanded coxsackievirus A16 empty particle in complex with antibody 9B5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-08-18
Release date:2022-10-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YV2
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BU of 7yv2 by Molmil
Cryo-EM structure of expanded coxsackievirus A16 empty particle after incubation with 8C4 antibody
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-08-18
Release date:2022-10-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YT9
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BU of 7yt9 by Molmil
crystal structure of AGD1-4 of Arabidopsis AGDP3
Descriptor: AGD1-4 of Arabidopsis AGDP3
Authors:Zhou, X, Du, J.
Deposit date:2022-08-13
Release date:2022-10-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis.
J Integr Plant Biol, 64, 2022
7YTA
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BU of 7yta by Molmil
crystal structure of NtAGDP3 AGD1-2 in complex with an H3K9me2 peptide
Descriptor: AGDP3 AGD1-2, H3(1-15)K9me2 peptide
Authors:Zhou, X, Du, J.
Deposit date:2022-08-13
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis.
J Integr Plant Biol, 64, 2022
7VS4
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BU of 7vs4 by Molmil
Crystal structure of PacII_M1M2S-DNA(m6A)-SAH complex
Descriptor: DNA (25-mer), S-ADENOSYL-L-HOMOCYSTEINE, Site-specific DNA recognition subunit, ...
Authors:Zhu, J, Gao, P.
Deposit date:2021-10-25
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular insights into DNA recognition and methylation by non-canonical type I restriction-modification systems.
Nat Commun, 13, 2022
7VRU
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BU of 7vru by Molmil
Crystal structure of PacII_M1M2S-DNA-SAH complex
Descriptor: DNA (25-mer), S-ADENOSYL-L-HOMOCYSTEINE, Site-specific DNA recognition subunit, ...
Authors:Zhu, J, Gao, P.
Deposit date:2021-10-25
Release date:2022-11-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular insights into DNA recognition and methylation by non-canonical type I restriction-modification systems.
Nat Commun, 13, 2022
7W7L
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BU of 7w7l by Molmil
Structure of NF-kB p52 homodimer bound to 13-mer A/T-centric P-Selectin kB DNA fragment
Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*TP*TP*AP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*GP*TP*AP*AP*CP*CP*CP*CP*T)-3'), Nuclear factor NF-kappa-B p52 subunit
Authors:Meshcheryakov, V.A, Wang, V.Y.-F.
Deposit date:2021-12-05
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation.
Elife, 12, 2023
7WB2
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BU of 7wb2 by Molmil
Oxidase ChaP-D49L/Y109F mutant
Descriptor: ChaP, FE (III) ION
Authors:Zong, Y, Zheng, W, Wang, Y, Zhu, J, Tan, R.
Deposit date:2021-12-15
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alteration of the Catalytic Reaction Trajectory of a Vicinal Oxygen Chelate Enzyme by Directed Evolution.
Angew.Chem.Int.Ed.Engl., 61, 2022
7W2P
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BU of 7w2p by Molmil
Tudor domain of SMN in complex with a small molecule
Descriptor: 2-[(4-fluorophenyl)methyl]-2-azatricyclo[7.3.0.0^{3,7}]dodeca-1(9),3(7)-dien-8-imine, MAGNESIUM ION, Survival motor neuron protein, ...
Authors:Li, W, Arrowsmith, C.H, Edwards, A.M, Liu, Y, Min, J.
Deposit date:2021-11-24
Release date:2022-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
7W30
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BU of 7w30 by Molmil
Tudor domain of SMN in complex with a small molecule
Descriptor: 1,2-dimethylquinolin-4-imine, Survival motor neuron protein, UNKNOWN ATOM OR ION
Authors:Li, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Liu, Y, Min, J.
Deposit date:2021-11-24
Release date:2022-10-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
7Z1H
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BU of 7z1h by Molmil
VAR2CSA APO
Descriptor: VAR2CSA APO
Authors:Raghavan, S.S.R, Wang, K.T.
Deposit date:2022-02-24
Release date:2022-11-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM reveals the conformational epitope of human monoclonal antibody PAM1.4 broadly reacting with polymorphic malarial protein VAR2CSA.
Plos Pathog., 18, 2022
7Z12
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BU of 7z12 by Molmil
VAR2 complex with PAM1.4
Descriptor: PAM1.4, Heavy Chain, light Chain, ...
Authors:Raghavan, S.S.R, Wang, K.T.
Deposit date:2022-02-24
Release date:2022-11-02
Last modified:2022-11-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reveals the conformational epitope of human monoclonal antibody PAM1.4 broadly reacting with polymorphic malarial protein VAR2CSA.
Plos Pathog., 18, 2022
5TO3
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BU of 5to3 by Molmil
Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue linker and bound to PPACK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
Authors:Barranco-Medina, S, Murphy, M, Pelc, L, Chen, Z, Di Cera, E, Pozzi, N.
Deposit date:2016-10-16
Release date:2017-03-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Rational Design of Protein C Activators.
Sci Rep, 7, 2017
7WRX
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BU of 7wrx by Molmil
Structure of Deinococcus radiodurans HerA-ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HerA, MAGNESIUM ION
Authors:Cheng, K.
Deposit date:2022-01-27
Release date:2023-02-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.40003562 Å)
Cite:Structural and DNA end resection study of the bacterial NurA-HerA complex.
Bmc Biol., 21, 2023
7WRW
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BU of 7wrw by Molmil
Structure of Deinococcus radiodurans HerA
Descriptor: HerA
Authors:Cheng, K.
Deposit date:2022-01-27
Release date:2023-02-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.00008273 Å)
Cite:Structural and DNA end resection study of the bacterial NurA-HerA complex.
Bmc Biol., 21, 2023
3US6
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BU of 3us6 by Molmil
Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt1 from Medicago truncatula
Descriptor: Histidine-containing Phosphotransfer Protein type 1, MtHPt1
Authors:Ruszkowski, M, Brzezinski, K, Jedrzejczak, R, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2011-11-23
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.446 Å)
Cite:Medicago truncatula histidine-containing phosphotransfer protein: Structural and biochemical insights into the cytokinin transduction pathway in plants.
Febs J., 280, 2013
7YC0
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BU of 7yc0 by Molmil
Acetylesterase (LgEstI) W.T.
Descriptor: ACETATE ION, Alpha/beta hydrolase, CHLORIDE ION
Authors:Do, H, Lee, J.H.
Deposit date:2022-06-30
Release date:2023-06-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and biochemical analysis of acetylesterase (LgEstI) from Lactococcus garvieae.
Plos One, 18, 2023

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