5V1P
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![BU of 5v1p by Molmil](/molmil-images/mine/5v1p) | DNA polymerase beta substrate complex with 8-oxoG:C at the primer terminus and incoming dCTP analog | 分子名称: | 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Whitaker, A.M, Schaich, M.A. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.991 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1I
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![BU of 5v1i by Molmil](/molmil-images/mine/5v1i) | DNA polymerase beta ternary product complex with 8-oxoG:C and inserted dCTP | 分子名称: | CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG)P*C)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Whitaker, A.M, Schaich, M.A. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.035 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1R
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![BU of 5v1r by Molmil](/molmil-images/mine/5v1r) | DNA polymerase beta reactant complex with 8-oxoG:C at the primer terminus and incoming dCTP | 分子名称: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Whitaker, A.M, Schaich, M.A. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.077 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1H
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![BU of 5v1h by Molmil](/molmil-images/mine/5v1h) | DNA polymerase beta binary complex with 8-oxoG:A at the primer terminus | 分子名称: | DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG))-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... | 著者 | Freudenthal, B.D, Schaich, M.A, Whitaker, A.M, Smith, M.R. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (1.946 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1O
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![BU of 5v1o by Molmil](/molmil-images/mine/5v1o) | DNA polymerase beta product complex with 8-oxoG:A and inserted dCTP | 分子名称: | CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG)P*C)-3'), ... | 著者 | Freudenthal, B.D, Schaich, M.A, Whitaker, A.M, Smith, M.R. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.801 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1F
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![BU of 5v1f by Molmil](/molmil-images/mine/5v1f) | DNA polymerase beta substrate complex with 8-oxoG at the primer terminus and incoming dCTP | 分子名称: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Schaich, M.A, Whitaker, A.M. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.181 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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6W2P
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![BU of 6w2p by Molmil](/molmil-images/mine/6w2p) | APE1 endonuclease product complex L104R | 分子名称: | 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Whitaker, A.M. | 登録日 | 2020-03-06 | 公開日 | 2020-06-10 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | 主引用文献 | Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
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6W3U
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![BU of 6w3u by Molmil](/molmil-images/mine/6w3u) | |
6W3L
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![BU of 6w3l by Molmil](/molmil-images/mine/6w3l) | |
6W43
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![BU of 6w43 by Molmil](/molmil-images/mine/6w43) | |
6W0Q
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![BU of 6w0q by Molmil](/molmil-images/mine/6w0q) | APE1 endonuclease product complex D148E | 分子名称: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Whitaker, A.M. | 登録日 | 2020-03-02 | 公開日 | 2020-06-10 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
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5VEZ
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![BU of 5vez by Molmil](/molmil-images/mine/5vez) | DNA polymerase beta substrate complex with 8-oxoG:A at the primer terminus and incoming dCTP analog | 分子名称: | 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG))-3'), ... | 著者 | Freudenthal, B.D, Schaich, M.A, Whitaker, A.M, Smith, M.R. | 登録日 | 2017-04-06 | 公開日 | 2017-05-10 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.039 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5WN0
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![BU of 5wn0 by Molmil](/molmil-images/mine/5wn0) | APE1 exonuclease substrate complex with a C/G match | 分子名称: | DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ... | 著者 | Freudenthal, B.D, Whitaker, A.M. | 登録日 | 2017-07-31 | 公開日 | 2018-02-28 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Molecular snapshots of APE1 proofreading mismatches and removing DNA damage. Nat Commun, 9, 2018
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5WN2
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![BU of 5wn2 by Molmil](/molmil-images/mine/5wn2) | |
5WN3
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![BU of 5wn3 by Molmil](/molmil-images/mine/5wn3) | |
5WN1
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![BU of 5wn1 by Molmil](/molmil-images/mine/5wn1) | APE1 exonuclease product complex | 分子名称: | CALCIUM ION, CHLORIDE ION, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*G)-3'), ... | 著者 | Freudenthal, B.D, Whitaker, A.M. | 登録日 | 2017-07-31 | 公開日 | 2018-02-28 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Molecular snapshots of APE1 proofreading mismatches and removing DNA damage. Nat Commun, 9, 2018
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5WN4
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![BU of 5wn4 by Molmil](/molmil-images/mine/5wn4) | |
5WN5
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![BU of 5wn5 by Molmil](/molmil-images/mine/5wn5) | |
6W3N
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![BU of 6w3n by Molmil](/molmil-images/mine/6w3n) | APE1 exonuclease substrate complex D148E | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(C7R))-3'), ... | 著者 | Freudenthal, B.D, Whitaker, A.M. | 登録日 | 2020-03-09 | 公開日 | 2020-06-10 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.69 Å) | 主引用文献 | Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
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6W3Q
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![BU of 6w3q by Molmil](/molmil-images/mine/6w3q) | |
5V1G
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![BU of 5v1g by Molmil](/molmil-images/mine/5v1g) | DNA polymerase beta binary complex with 8-oxoG at the primer terminus | 分子名称: | DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG))-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Whitaker, A.M, Schaich, M.A. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (1.798 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1N
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![BU of 5v1n by Molmil](/molmil-images/mine/5v1n) | DNA polymerase beta substrate complex with 8-oxoG:A at the primer terminus and incoming dCTP | 分子名称: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ... | 著者 | Freudenthal, B.D, Schaich, M.A, Whitaker, A.M, Smith, M.R. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.005 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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5V1J
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![BU of 5v1j by Molmil](/molmil-images/mine/5v1j) | DNA polymerase beta open product complex with 8-oxoG:C and inserted dCTP | 分子名称: | DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG)P*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... | 著者 | Freudenthal, B.D, Smith, M.R, Whitaker, A.M, Schaich, M.A. | 登録日 | 2017-03-02 | 公開日 | 2017-05-10 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.616 Å) | 主引用文献 | Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. Nucleic Acids Res., 45, 2017
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6BOS
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![BU of 6bos by Molmil](/molmil-images/mine/6bos) | |
6BOU
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![BU of 6bou by Molmil](/molmil-images/mine/6bou) | |