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7TIF
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2.85 Angstroem crystal structure of Arginyltransferase 1 (ATE1) from Saccharomyces cerevisiae
分子名称: Arginyl-tRNA--protein transferase 1, GLYCEROL, SULFATE ION
著者Van, V, Ejimogu, N.-E, Smith, A.T.
登録日2022-01-13
公開日2022-09-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The Structure of Saccharomyces cerevisiae Arginyltransferase 1 (ATE1).
J.Mol.Biol., 434, 2022
2J5O
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Pseudomonas aeruginosa FtsK gamma domain
分子名称: DNA TRANSLOCASE FTSK
著者Sivanathan, V, Allen, M.D, deBekker, C, Baker, R, Arciszewska, L, Freund, S.M, Bycroft, M, Lowe, J, Sherratt, D.J.
登録日2006-09-19
公開日2006-10-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Ftsk Gamma Domain Directs Oriented DNA Translocation by Interacting with Kops.
Nat.Struct.Mol.Biol., 13, 2006
2J5P
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E. coli FtsK gamma domain
分子名称: DNA TRANSLOCASE FTSK
著者Sivanathan, V, Allen, M.D, de Bekker, C, Baker, R, Arciszewska, L, Freund, S.M, Bycroft, M, Lowe, J, Sherratt, D.J.
登録日2006-09-19
公開日2006-10-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Ftsk Gamma Domain Directs Oriented DNA Translocation by Interacting with Kops.
Nat.Struct.Mol.Biol., 13, 2006
6MG7
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Crystal structure of the RV144 C1-C2 specific antibody CH54 Fab in complex with HIV-1 CLADE A/E GP120 and M48U1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CH54 Fab heavy chain, CH54 Fab light chain, ...
著者Van, V, Tolbert, W.D, Pazgier, M.
登録日2018-09-13
公開日2019-09-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Recognition Patterns of the C1/C2 Epitopes Involved in Fc-Mediated Response in HIV-1 Natural Infection and the RV114 Vaccine Trial.
Mbio, 11, 2020
6MJO
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CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) FC-GAMMA RECEPTOR III
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Low affinity immunoglobulin gamma Fc region receptor III, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Van, V, Tolbert, W.D, Pazgier, M.
登録日2018-09-21
公開日2019-11-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Decoding human-macaque interspecies differences in Fc-effector functions: The structural basis for CD16-dependent effector function in Rhesus macaques.
Front Immunol, 13, 2022
1MRN
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CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH BISUBSTRATE INHIBITOR (TP5A)
分子名称: MAGNESIUM ION, P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE, SULFATE ION, ...
著者Haouz, A, Vanheusden, V, Munier-Lehmann, H, Froeyen, M, Herdewijn, P, Van Calenbergh, S, Delarue, M.
登録日2002-09-18
公開日2003-01-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism.
J.Biol.Chem., 278, 2003
6OFI
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CRYSTAL STRUCTURE OF the RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CH55 Fab heavy chain, CH55 Fab light chain, ...
著者Tolbert, W.D, Yan, F, Van, V, Pazgier, M.
登録日2019-03-29
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献Recognition Patterns of the C1/C2 Epitopes Involved in Fc-Mediated Response in HIV-1 Natural Infection and the RV114 Vaccine Trial.
Mbio, 11, 2020
6OED
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CRYSTAL STRUCTURE OF THE RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB
分子名称: CH55 Fab heavy chain, CH55 Fab light chain
著者Yan, F, Van, V, Tolbert, W.D, Pazgier, M.
登録日2019-03-27
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.461 Å)
主引用文献Recognition Patterns of the C1/C2 Epitopes Involved in Fc-Mediated Response in HIV-1 Natural Infection and the RV114 Vaccine Trial.
Mbio, 11, 2020
1MRS
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CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH 5-CH2OH DEOXYURIDINE MONOPHOSPHATE
分子名称: 5-HYDROXYMETHYLURIDINE-2'-DEOXY-5'-MONOPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Haouz, A, Vanheusden, V, Munier-Lehmann, H, Froeyen, M, Herdewijn, P, Van Calenbergh, S, Delarue, M.
登録日2002-09-18
公開日2003-01-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism.
J.Biol.Chem., 278, 2003
7U5O
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CRYSTAL STRUCTURE OF THE BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE 2 LIGAND BINDING DOMAIN IN COMPLEX WITH ACTIVIN-B
分子名称: Bone morphogenetic protein receptor type-2, Inhibin beta B chain
著者Chu, K.Y, Malik, A, Thamilselvan, V, Martinez-Hackert, E.
登録日2022-03-02
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Type II BMP and activin receptors BMPR2 and ACVR2A share a conserved mode of growth factor recognition.
J.Biol.Chem., 298, 2022
7U5P
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CRYSTAL STRUCTURE OF THE ACTIVIN RECEPTOR TYPE-2A LIGAND BINDING DOMAIN IN COMPLEX WITH ACTIVIN-A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2A, Inhibin beta A chain
著者Chu, K.Y, Malik, A, Thamilselvan, V, Martinez-Hackert, E.
登録日2022-03-02
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Type II BMP and activin receptors BMPR2 and ACVR2A share a conserved mode of growth factor recognition.
J.Biol.Chem., 298, 2022
1X35
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Recombinant T=3 capsid of a site specific mutant of SeMV CP
分子名称: CALCIUM ION, Coat protein
著者Sangita, V, Lokesh, G.L, Satheshkumar, P.S, Saravanan, V, Vijay, C.S, Savithri, H.S, Murthy, M.R.
登録日2005-04-29
公開日2005-10-18
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural studies on recombinant T = 3 capsids of Sesbania mosaic virus coat protein mutants.
Acta Crystallogr.,Sect.D, 61, 2005
1X33
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T=3 recombinant capsid of SeMV CP
分子名称: CALCIUM ION, Coat protein
著者Sangita, V, Lokesh, G.L, Satheshkumar, P.S, Saravanan, V, Vijay, C.S, Savithri, H.S, Murthy, M.R.
登録日2005-04-29
公開日2005-10-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural studies on recombinant T = 3 capsids of Sesbania mosaic virus coat protein mutants.
Acta Crystallogr.,Sect.D, 61, 2005
1VAK
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T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65
分子名称: CALCIUM ION, coat protein
著者Sangita, V, Lokesh, G.L, Satheshkumer, P.S, Vijay, C.S, Saravanan, V, Savithri, H.S, Murthy, M.R.
登録日2004-02-18
公開日2004-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献T=1 capsid structures of Sesbania mosaic virus coat protein mutants: determinants of T=3 and T=1 capsid assembly
J.Mol.Biol., 342, 2004
1VB4
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T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)36
分子名称: CALCIUM ION, coat protein
著者Sangita, V, Lokesh, G.L, Satheshkumar, P.S, Vijay, C.S, Saravanan, V, Savithri, H.S, Murthy, M.R.
登録日2004-02-21
公開日2004-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献T=1 capsid structures of Sesbania mosaic virus coat protein mutants: determinants of T=3 and T=1 capsid assembly
J.Mol.Biol., 342, 2004
1VB2
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T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N
分子名称: coat protein
著者Sangita, V, Lokesh, G.L, Satheshkumar, P.S, Vijay, C.S, Saravanan, V, Savithri, H.S, Murthy, M.R.
登録日2004-02-21
公開日2004-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献T=1 capsid structures of Sesbania mosaic virus coat protein mutants: determinants of T=3 and T=1 capsid assembly
J.Mol.Biol., 342, 2004
1T3Q
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Crystal structure of quinoline 2-Oxidoreductase from Pseudomonas Putida 86
分子名称: DIOXOSULFIDOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Bonin, I, Martins, B.M, Purvanov, V, Fetzner, S, Huber, R, Dobbek, H.
登録日2004-04-27
公開日2004-09-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Active site geometry and substrate recognition of the molybdenum hydroxylase quinoline 2-oxidoreductase.
STRUCTURE, 12, 2004
6CJX
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Crystal structure of a Fc fragment LALA mutant (L234A, L235A) of human IgG1 (crystal form 2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc fragment of human IgG1
著者Van, V, Tolbert, W.D, Pazgier, M.
登録日2018-02-27
公開日2019-03-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Antigen-Induced Allosteric Changes in a Human IgG1 Fc Increase Low-Affinity Fc gamma Receptor Binding.
Structure, 2020
4P7B
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Crystal structure of S. typhimurium peptidyl-tRNA hydrolase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Peptidyl-tRNA hydrolase
著者Vandavasi, V.G, McFeeters, R.L, Taylor-Creel, K, Coates, L, McFeeters, H.
登録日2014-03-26
公開日2014-07-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Recombinant production, crystallization and X-ray crystallographic structure determination of peptidyl-tRNA hydrolase from Salmonella typhimurium.
Acta Crystallogr.,Sect.F, 70, 2014
5W4L
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Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with HIV-1 clade A/E gp120, the CD4 mimetic M48U1, and the antibody N5-i5.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody N12-i3 Fab heavy chain, Antibody N12-i3 light chain, ...
著者Tolbert, W.D, Gohain, N, Pazgier, M.
登録日2017-06-12
公開日2017-11-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Targeting the Late Stage of HIV-1 Entry for Antibody-Dependent Cellular Cytotoxicity: Structural Basis for Env Epitopes in the C11 Region.
Structure, 25, 2017
6IBO
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Catalytic deficiency of O-GlcNAc transferase leads to X-linked intellectual disability
分子名称: (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, ALA-VAL-SER-ARG-ALA, PHOSPHATE ION, ...
著者Gundogdu, M, van Aalten, D.M.F.
登録日2018-11-30
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Catalytic deficiency of O-GlcNAc transferase leads to X-linked intellectual disability.
Proc.Natl.Acad.Sci.USA, 116, 2019
6MJ3
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CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) IGG1 Fc Fragment-Fc-GAMMA RECEPTOR III complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Igg1 Fc, ...
著者Gohain, N, Tolbert, W.D, Pazgier, M.
登録日2018-09-20
公開日2019-08-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Decoding human-macaque interspecies differences in Fc-effector functions: The structural basis for CD16-dependent effector function in Rhesus macaques.
Front Immunol, 13, 2022
6OEJ
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CRYSTAL STRUCTURE OF THE NON-NEUTRALIZING AND ADCC-POTENT ANTIBODY C11 IN COMPLEX WITH HIV-1 CLADE A/E GP120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, C11 Fab heavy chain, C11 Fab light chain, ...
著者Tolbert, W.D, Pazgier, M.
登録日2019-03-27
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Recognition Patterns of the C1/C2 Epitopes Involved in Fc-Mediated Response in HIV-1 Natural Infection and the RV114 Vaccine Trial.
Mbio, 11, 2020
6BG9
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HYBRID NMR/CRYO-EM STRUCTURE OF THE HIV-1 RNA DIMERIZATION SIGNAL
分子名称: RNA dimerization signal
著者Summers, M.F.
登録日2017-10-27
公開日2018-02-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9 Å), SOLUTION NMR
主引用文献Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach.
Structure, 26, 2018
6CJC
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CRYSTAL STRUCTURE OF A FC FRAGMENT LALA MUTANT (L234A, L235A) OF HUMAN IGG1 (CRYSTAL FORM 3)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Uncharacterized protein DKFZp686C11235
著者Tolbert, W.D, Van, V, Pazgier, M.
登録日2018-02-26
公開日2019-03-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.575 Å)
主引用文献Antigen-Induced Allosteric Changes in a Human IgG1 Fc Increase Low-Affinity Fc gamma Receptor Binding.
Structure, 28, 2020

 

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