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1YSV
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BU of 1ysv by Molmil
Solution structure of the central region of the human GluR-B R/G pre-mRNA
分子名称: 27-MER
著者Stefl, R, Allain, F.H.
登録日2005-02-09
公開日2005-07-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A novel RNA pentaloop fold involved in targeting ADAR2.
Rna, 11, 2005
2B7V
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BU of 2b7v by Molmil
Structure of ADAR2 dsRBM2
分子名称: Double-stranded RNA-specific editase 1
著者Stefl, R, Xu, M, Skrisovska, L, Emeson, R.B, Allain, F.H.-T.
登録日2005-10-05
公開日2006-03-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.
Structure, 14, 2006
1RVH
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BU of 1rvh by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER GCAAAATTTTGC
分子名称: 5'-D(*GP*CP*AP*AP*AP*AP*TP*TP*TP*TP*GP*C)-3'
著者Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
登録日2003-12-13
公開日2004-02-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
2B7T
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BU of 2b7t by Molmil
Structure of ADAR2 dsRBM1
分子名称: Double-stranded RNA-specific editase 1
著者Stefl, R, Xu, M, Skrisovska, L, Emeson, R.B, Allain, F.H.-T.
登録日2005-10-05
公開日2006-03-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.
Structure, 14, 2006
1RVI
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BU of 1rvi by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER CGTTTTAAAACG
分子名称: 5'-D(*CP*GP*TP*TP*TP*TP*AP*AP*AP*AP*CP*G)-3'
著者Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
登録日2003-12-13
公開日2004-02-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
2L3J
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BU of 2l3j by Molmil
The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove
分子名称: Double-stranded RNA-specific editase 1, RNA (71-MER)
著者Stefl, R, Oberstrass, F.C, Allain, F.H.-T.
登録日2010-09-14
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L41
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Nab3 RRM - UCUU complex
分子名称: RNA (5'-R(P*UP*CP*UP*U)-3'), RRM domain from Nuclear polyadenylated RNA-binding protein 3
著者Stefl, R, Pergoli, R, Hobor, F, Kubicek, K, Zimmermann, M, Pasulka, J, Hofr, C.
登録日2010-09-28
公開日2010-11-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Recognition of transcription termination signal by the nuclear polyadenylated RNA-binding (NAB) 3 protein
J.Biol.Chem., 286, 2011
2L2J
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BU of 2l2j by Molmil
Solution NMR structure of the lower part of the R/G stem loop RNA
分子名称: RNA (42-MER)
著者Oberstrass, F.F, Allain, F.H.-T, Stefl, R.
登録日2010-08-20
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L3C
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BU of 2l3c by Molmil
Solution structure of ADAR2 dsRBM1 bound to LSL RNA
分子名称: Double-stranded RNA-specific editase 1, RNA (34-MER)
著者Allain, F, Stefl, R, Oberstrass, F.
登録日2010-09-12
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L2K
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BU of 2l2k by Molmil
Solution NMR structure of the R/G STEM LOOP RNA-ADAR2 DSRBM2 Complex
分子名称: Adenosine deaminase, RNA (42-MER)
著者Allain, F.H.-T, Oberstrass, F.C, Stefl, R.
登録日2010-08-20
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
7ZPK
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BU of 7zpk by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate and TARBP2 subunit
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer, RISC-loading complex subunit TARBP2
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7ZPI
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Mammalian Dicer in the "dicing state" with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (5.91 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7ZPJ
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BU of 7zpj by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate and TARBP2 subunit
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer, RISC-loading complex subunit TARBP2 isoform 1
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-12-28
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7YZ4
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BU of 7yz4 by Molmil
Mouse endoribonuclease Dicer (composite structure)
分子名称: Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7YYM
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BU of 7yym by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (4.19 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7YYN
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BU of 7yyn by Molmil
Mammalian Dicer in the dicing state with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Isoform 2 of Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (6.21 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
1KR8
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BU of 1kr8 by Molmil
Refinement of d(GCGAAGC) Hairpin Structure Using One-and Two-Bonds Residual Dipolar Couplings
分子名称: 5'-D(*GP*CP*GP*AP*AP*GP*C)-3'
著者Padrta, P, Stefl, R, Zidek, L, Sklenar, V.
登録日2002-01-09
公開日2002-12-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Refinement of d(GCGAAGC) Hairpin Structure Using One- and Two-Bond Residual Dipolar Couplings
J.BIOMOL.NMR, 24, 2002
7O3D
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BU of 7o3d by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
分子名称: Transcription elongation factor SPT6
著者Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
登録日2021-04-01
公開日2022-04-13
最終更新日2022-06-15
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
7O6B
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BU of 7o6b by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
分子名称: Transcription elongation factor SPT6
著者Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
登録日2021-04-09
公開日2022-04-20
最終更新日2022-06-22
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
6QTC
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BU of 6qtc by Molmil
tSH2 domain of transcription elongation factor Spt6 complexed with tyrosine phosphorylated CTD
分子名称: Tyrosine phosphorylated CTD, tSH2 domain of transcription elongation factor Spt6
著者Brazda, P, Krejcikova, M, Smirakova, E, Kubicek, K, Stefl, R.
登録日2019-02-24
公開日2020-07-15
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献tSH2 domain of transcription elongation factor Spt6 complexed with tyrosine phosphorylated CTD
To Be Published
5M9D
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BU of 5m9d by Molmil
Solution structure of Rtt103 CTD-interacting domain bound to a Ser2Ser7 phosphorylated CTD peptide
分子名称: Regulator of Ty1 transposition protein 103, THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER
著者Jasnovidova, O, Kubicek, K, Stefl, R.
登録日2016-11-01
公開日2017-10-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and dynamics of the RNAPII CTDsome with Rtt103.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5M48
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Coiled coil domain of Rtt103p
分子名称: Regulator of Ty1 transposition protein 103
著者Jasnovidova, O, Kalynych, S, Plevka, P, Stefl, R.
登録日2016-10-18
公開日2017-10-11
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.593 Å)
主引用文献Structure and dynamics of the RNAPII CTDsome with Rtt103.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LVF
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BU of 5lvf by Molmil
Solution structure of Rtt103 CTD-interacting domain bound to a Thr4 phosphorylated CTD peptide
分子名称: PRO-SER-TYR-SER-PRO-PTH-SER-PRO-SER-TYR-SER-PRO-THR-SER-PRO-SER, Regulator of Ty1 transposition protein 103
著者Jasnovidova, O, Kubicek, K, Krejcikova, M, Stefl, R.
登録日2016-09-14
公開日2017-05-10
最終更新日2019-10-30
実験手法SOLUTION NMR
主引用文献Structural insight into recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by Rtt103p.
EMBO Rep., 18, 2017
6GC3
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BU of 6gc3 by Molmil
Structure of Nrd1 CID - Sen1 NIM complex
分子名称: Helicase SEN1, Protein NRD1
著者Jasnovidova, O, Kubicek, K, Stefl, R.
登録日2018-04-17
公開日2020-02-05
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure of Nrd1 CID - Sen1 NIM complex
To Be Published
1PQT
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REFINEMENT OF d(GCGAAGC) HAIRPIN STRUCTURE USING ONE- AND TWO-BOND RESIDUAL DIPOLAR COUPLINGS
分子名称: 5'-D(*GP*CP*GP*AP*AP*GP*C)-3'
著者Padrta, P, Stefl, R, Zidek, L, Sklenar, V.
登録日2003-06-19
公開日2003-07-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Refinement of d(GCGAAGC) Hairpin Structure Using One- and Two-Bond Residual Dipolar Couplings
J.Biomol.NMR, 24, 2002

 

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