Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7SLZ
DownloadVisualize
BU of 7slz by Molmil
CRYSTAL STRUCTURE OF GID4 IN COMPLEX WITH BPF023596
分子名称: Glucose-induced degradation protein 4 homolog, N-[(1s,4s)-4-(1H-benzimidazol-2-yl)cyclohexyl]-N~2~-[(1H-indol-2-yl)methyl]glycinamide
著者Song, X, Dong, A, Calabrese, M, Wang, F, Owen, D, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2021-10-25
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献CRYSTAL STRUCTURE OF GID4 IN COMPLEX WITH BPF023596
To Be Published
2JOO
DownloadVisualize
BU of 2joo by Molmil
The NMR Solution Structure of Recombinant RGD-hirudin
分子名称: Hirudin variant-1
著者Song, X, Mo, W, Liu, X, Yan, X, Song, H, Dai, L.
登録日2007-03-14
公開日2008-03-18
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献The NMR solution structure of recombinant RGD-hirudin
Biochem.Biophys.Res.Commun., 360, 2007
6JC3
DownloadVisualize
BU of 6jc3 by Molmil
The Cryo-EM structure of nucleoprotein-RNA complex of Newcastle disease virus
分子名称: Nucleocapsid, polyU
著者Song, X, Shan, H, Zhu, Y, Ding, W, Ouyang, S, Shen, Q.T, Liu, Z.J.
登録日2019-01-28
公開日2019-08-07
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Self-capping of nucleoprotein filaments protects the Newcastle disease virus genome.
Elife, 8, 2019
6JN2
DownloadVisualize
BU of 6jn2 by Molmil
Crystal structure of the coiled-coil domains of human DOT1L in complex with AF10
分子名称: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10
著者Song, X, Wang, M, Yang, N, Xu, R.M.
登録日2019-03-13
公開日2019-09-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A higher-order configuration of the heterodimeric DOT1L-AF10 coiled-coil domains potentiates their leukemogenenic activity.
Proc.Natl.Acad.Sci.USA, 116, 2019
4F7G
DownloadVisualize
BU of 4f7g by Molmil
Crystal structure of talin autoinhibition complex
分子名称: Talin-1
著者Song, X, Qin, J, Ye, S, Zhang, R.
登録日2012-05-16
公開日2012-07-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A novel membrane-dependent on/off switch mechanism of talin FERM domain at sites of cell adhesion.
Cell Res., 22, 2012
8D1T
DownloadVisualize
BU of 8d1t by Molmil
Crystal structure of human USP30 in complex with a covalent inhibitor 552 and a Fab
分子名称: (1R,2R,4S,7E)-7-[amino(sulfanyl)methylidene]-2-{[(1P)-3-chloro-3'-(1-cyanocyclopropyl)[1,1'-biphenyl]-4-carbonyl]amino}-7-azabicyclo[2.2.1]heptan-7-ium, 1,2-ETHANEDIOL, Ubiquitin carboxyl-terminal hydrolase 30, ...
著者Song, X, Butler, J, Li, C, Zhang, K, Zhang, D, Hao, Y.
登録日2022-05-27
公開日2023-02-01
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献TBD
To Be Published
8D0A
DownloadVisualize
BU of 8d0a by Molmil
Crystal structure of human USP30 in complex with a covalent inhibitor 829 and a Fab
分子名称: Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION, mouse anti-huUSP30 Fab heavy chain, ...
著者Song, X, Butler, J, Li, C, Zhang, K, Zhang, D, Hao, Y.
登録日2022-05-25
公開日2023-02-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献TBD
To Be Published
5UN1
DownloadVisualize
BU of 5un1 by Molmil
Crystal structure of GluN1/GluN2B delta-ATD NMDA receptor
分子名称: (5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annulene, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Song, X, Gouaux, E.
登録日2017-01-30
公開日2018-02-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Mechanism of NMDA receptor channel block by MK-801 and memantine.
Nature, 556, 2018
8SHB
DownloadVisualize
BU of 8shb by Molmil
Crystal Structure of PRMT3 with Compound YD1-208
分子名称: 5'-S-[3-(N'-phenylcarbamimidamido)propyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-13
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal Structure of PRMT3 with Compound YD1-208
To be published
8SP6
DownloadVisualize
BU of 8sp6 by Molmil
COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
分子名称: (1s,4s)-bicyclo[2.2.1]heptane, (5R0)FAL(MLZ)(5R5), Chromodomain Y-like protein 2, ...
著者Song, X, Beldar, S, Dong, A, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-05-02
公開日2024-03-13
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
To be published
8SIG
DownloadVisualize
BU of 8sig by Molmil
Crystal Structure of PRMT4 with Compound YD1-288
分子名称: 5'-{(3-aminopropyl)[2-(benzylcarbamamido)ethyl]amino}-5'-deoxyadenosine, Histone-arginine methyltransferase CARM1, SODIUM ION, ...
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of PRMT4 with Compound YD1-288
To be published
8SIH
DownloadVisualize
BU of 8sih by Molmil
Crystal Structure of PRMT4 with Compound YD1-289
分子名称: 5'-{[2-(benzylcarbamamido)ethyl][3-(N'-cyclopentylcarbamimidamido)propyl]amino}-5'-deoxyadenosine, CALCIUM ION, Histone-arginine methyltransferase CARM1
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of PRMT4 with Compound YD1-289
To be published
8SHR
DownloadVisualize
BU of 8shr by Molmil
Crystal Structure of PRMT3 with Compound YD1-214
分子名称: 5'-S-[2-(phenylcarbamamido)ethyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal Structure of PRMT3 with Compound YD1-214
To be published
8SIO
DownloadVisualize
BU of 8sio by Molmil
Crystal structure of PRMT3 with YD1-66
分子名称: 5'-S-{3-[N'-(4'-chloro[1,1'-biphenyl]-3-yl)carbamimidamido]propyl}-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Arrowsmith, C.H, Edwards, A.M, Deng, Y, Huang, R, Min, J.
登録日2023-04-16
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of PRMT3 with YD1-66
To be published
8SII
DownloadVisualize
BU of 8sii by Molmil
Crystal Structure of CBX7 with compound UNC4976
分子名称: CALCIUM ION, CHLORIDE ION, Chromobox protein homolog 7, ...
著者Song, X, Dong, A, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Crystal Structure of CBX7 with compound UNC4976
To be published
7CYC
DownloadVisualize
BU of 7cyc by Molmil
Cryo-EM structures of Alphacoronavirus spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Song, X, Shi, Y, Ding, W, Liu, Z.J, Peng, G.
登録日2020-09-03
公開日2020-12-23
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM analysis of the HCoV-229E spike glycoprotein reveals dynamic prefusion conformational changes.
Nat Commun, 12, 2021
8IA1
DownloadVisualize
BU of 8ia1 by Molmil
plastidial glycerol-3-phosphate acyltransferases (GPAT) from the green alga Myrmecia incisa
分子名称: Glycerol-3-phosphate acyltransferase, chloroplastic
著者Song, X.
登録日2023-02-07
公開日2024-02-07
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Unique recognition of the microalgal plastidial glycerol-3-phosphate acyltransferase for acyl-ACP
To Be Published
7CYD
DownloadVisualize
BU of 7cyd by Molmil
Cryo-EM structures of Alphacoronavirus spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Song, X, Shi, Y, Ding, W, Liu, Z.J, Peng, G.
登録日2020-09-03
公開日2020-12-23
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Cryo-EM analysis of the HCoV-229E spike glycoprotein reveals dynamic prefusion conformational changes.
Nat Commun, 12, 2021
4OUL
DownloadVisualize
BU of 4oul by Molmil
Crystal structure of human Caprin-2 C1q domain
分子名称: CALCIUM ION, Caprin-2, GLYCEROL
著者Song, X, Li, L.
登録日2014-02-17
公開日2014-10-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling
J.Biol.Chem., 289, 2014
4OUS
DownloadVisualize
BU of 4ous by Molmil
Crystal structure of zebrafish Caprin-2 C1q domain
分子名称: CALCIUM ION, Caprin-2
著者Song, X, Li, L.
登録日2014-02-18
公開日2014-10-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling
J.Biol.Chem., 289, 2014
6M1I
DownloadVisualize
BU of 6m1i by Molmil
CryoEM structure of human PAC1 receptor in complex with PACAP38
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Song, X, Wang, J, Zhang, D, Wang, H.W, Ma, Y.
登録日2020-02-26
公開日2020-03-11
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures of PAC1 receptor reveal ligand binding mechanism.
Cell Res., 30, 2020
6M1H
DownloadVisualize
BU of 6m1h by Molmil
CryoEM structure of human PAC1 receptor in complex with maxadilan
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Song, X, Wang, J, Zhang, D, Wang, H.W, Ma, Y.
登録日2020-02-26
公開日2020-03-11
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of PAC1 receptor reveal ligand binding mechanism.
Cell Res., 30, 2020
4OUM
DownloadVisualize
BU of 4oum by Molmil
Crystal structure of human Caprin-2 C1q domain
分子名称: CITRATE ANION, Caprin-2, ISOPROPYL ALCOHOL, ...
著者Song, X, Li, L.
登録日2014-02-18
公開日2014-10-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling
J.Biol.Chem., 289, 2014
8G2G
DownloadVisualize
BU of 8g2g by Molmil
Crystal structure of PRMT3 with compound YD1113
分子名称: 5'-S-[2-(benzylcarbamamido)ethyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3, SULFATE ION
著者Song, X, Dong, A, Arrowsmith, C.H, Edwards, A.M, Deng, Y, Huang, R, Min, J.
登録日2023-02-03
公開日2023-04-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献A unique binding pocket induced by a noncanonical SAH mimic to develop potent and selective PRMT inhibitors.
Acta Pharm Sin B, 13, 2023
8G2F
DownloadVisualize
BU of 8g2f by Molmil
Crystal Structure of PRMT3 with Compound II710
分子名称: 5'-S-[3-(N'-benzylcarbamimidamido)propyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-02-03
公開日2023-05-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献A unique binding pocket induced by a noncanonical SAH mimic to develop potent and selective PRMT inhibitors.
Acta Pharm Sin B, 13, 2023

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon