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2AGX
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BU of 2agx by Molmil
Crystal structure of the Schiff base intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. P212121 form
分子名称: 2-(1H-INDOL-3-YL)ETHANIMINE, Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AGW
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BU of 2agw by Molmil
Crystal structure of tryptamine-reduced aromatic amine dehydrogenase (AADH) from Alcaligenes faecalis in complex with tryptamine
分子名称: 2-(1H-INDOL-3-YL)ETHANAMINE, Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AH0
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BU of 2ah0 by Molmil
Crystal structure of the carbinolamine intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. Monoclinic form
分子名称: (1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL, 2-(1H-INDOL-3-YL)ETHANIMINE, Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AGL
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BU of 2agl by Molmil
Crystal structure of the phenylhydrazine adduct of aromatic amine dehydrogenase from Alcaligenes faecalis
分子名称: 1-PHENYLHYDRAZINE, Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AGY
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BU of 2agy by Molmil
Crystal structure of the Schiff base intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. Monoclinic form
分子名称: 2-(1H-INDOL-3-YL)ETHANIMINE, Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AH1
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BU of 2ah1 by Molmil
Crystal structure of aromatic amine dehydrogenase (AADH) from Alcaligenes faecalis
分子名称: Aromatic amine dehydrogenase
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AGZ
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BU of 2agz by Molmil
Crystal structure of the carbinolamine intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. F222 form
分子名称: (1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL, Aromatic amine dehydrogenase, ZINC ION
著者Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
登録日2005-07-27
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
7O0O
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BU of 7o0o by Molmil
Crystal structure of the B3 metallo-beta-lactamase L1 with hydrolysed ertapenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, Metallo-beta-lactamase L1, SULFATE ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2021-03-26
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystallography and QM/MM Simulations Identify Preferential Binding of Hydrolyzed Carbapenem and Penem Antibiotics to the L1 Metallo-beta-Lactamase in the Imine Form.
J.Chem.Inf.Model., 61, 2021
7AH0
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BU of 7ah0 by Molmil
Crystal structure of the de novo designed two-heme binding protein, 4D2
分子名称: 4D2, PROTOPORPHYRIN IX CONTAINING FE
著者Hutchins, G.H, Parnell, A.E, Anderson, J.L.R.
登録日2020-09-23
公開日2021-10-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献An expandable, modular de novo protein platform for precision redox engineering.
Proc.Natl.Acad.Sci.USA, 120, 2023
6XV4
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BU of 6xv4 by Molmil
Neutron structure of ferric ascorbate peroxidase-ascorbate complex
分子名称: ASCORBIC ACID, Ascorbate peroxidase, POTASSIUM ION, ...
著者Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
登録日2020-01-21
公開日2020-03-18
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
主引用文献Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
5WCZ
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BU of 5wcz by Molmil
Crystal Structure of Wild-Type MalL from Bacillus subtilis with TS analogue 1-deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, GLYCEROL, Oligo-1,6-glucosidase 1
著者Arcus, V.L, Prentice, E.J.
登録日2017-07-03
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Dynamical origins of heat capacity changes in enzyme-catalysed reactions.
Nat Commun, 9, 2018
8PEC
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BU of 8pec by Molmil
OXA-48_Q5-CAZ. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, Beta-lactamase, CHLORIDE ION
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8PEB
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BU of 8peb by Molmil
OXA-48_Q5. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8PEA
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BU of 8pea by Molmil
OXA-48_F72L. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: Beta-lactamase, CHLORIDE ION
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
2IAA
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BU of 2iaa by Molmil
Crystal Structure of an Electron Transfer Complex Between Aromatic Amine Dephydrogenase and Azurin from Alcaligenes Faecalis (Form 2)
分子名称: Aromatic Amine Dehydrogenase, Azurin, COPPER (II) ION
著者Sukumar, N, Chen, Z, Leys, D, Scrutton, N.S, Ferrati, D, Merli, A, Rossi, G.L, Bellamy, H.D, Chistoserdov, A, Davidson, V.L, Mathews, F.S.
登録日2006-09-07
公開日2006-11-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis.
Biochemistry, 45, 2006
7ODL
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BU of 7odl by Molmil
SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C1 symmetry
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein
著者Toelzer, C, Gupta, K, Yadav, S.K.N, Borucu, U, Schaffitzel, C, Berger, I.
登録日2021-04-29
公開日2022-01-26
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2.
Nat Commun, 13, 2022
7OD3
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BU of 7od3 by Molmil
SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C3 symmetry
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein
著者Toelzer, C, Gupta, K, Yadav, S.K.N, Borucu, U, Schaffitzel, C, Berger, I.
登録日2021-04-28
公開日2022-01-26
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2.
Nat Commun, 13, 2022
5NX6
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BU of 5nx6 by Molmil
Crystal structure of 1,8-cineole synthase from Streptomyces clavuligerus in complex with 2-fluoroneryl diphosphate
分子名称: (2E)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, 2-ethyl-2-(hydroxymethyl)propane-1,3-diol, ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, ...
著者Karuppiah, V, Leys, D, Scrutton, N.S.
登録日2017-05-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.
ACS Catal, 7, 2017
5OG9
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BU of 5og9 by Molmil
The BM3 mutant WIFI-WC heme domain in complex with testosterone
分子名称: Bifunctional cytochrome P450/NADPH--P450 reductase, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gamble, C, Munro, A.W, Leys, D.
登録日2017-07-12
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Regio- and diastereoselective hydroxylation of steroids using P450-BM3: Readdressing the numbers problem in directed evolution
To Be Published
5NX7
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BU of 5nx7 by Molmil
Crystal structure of 1,8-cineole synthase from Streptomyces clavuligerus in complex with 2-fluoroneryl diphosphate and 2-fluorogeranyl diphosphate
分子名称: (2E)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, (2Z)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, 2-ethyl-2-(hydroxymethyl)propane-1,3-diol, ...
著者Karuppiah, V, Leys, D, Scrutton, N.S.
登録日2017-05-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.
ACS Catal, 7, 2017
5NX4
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Crystal structure of Linalool/Nerolidol synthase from Streptomyces clavuligerus
分子名称: GLYCEROL, Pentalenene synthase
著者Karuppiah, V, Leys, D, Scrutton, N.S.
登録日2017-05-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.
ACS Catal, 7, 2017
5NX5
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BU of 5nx5 by Molmil
Crystal structure of Linalool/Nerolidol synthase from Streptomyces clavuligerus in complex with 2-fluorogeranyl diphosphate
分子名称: (2Z)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, CHLORIDE ION, GLYCEROL, ...
著者Karuppiah, V, Leys, D, Scrutton, N.S.
登録日2017-05-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural Basis of Catalysis in the Bacterial Monoterpene Synthases Linalool Synthase and 1,8-Cineole Synthase.
ACS Catal, 7, 2017
6NW4
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BU of 6nw4 by Molmil
Evolution of a computationally designed Kemp eliminase
分子名称: 6-NITROBENZOTRIAZOLE, Indole-3-glycerol phosphate synthase, SULFATE ION
著者Bunzel, A, Mittl, P, Hilvert, D.
登録日2019-02-06
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Emergence of a Negative Activation Heat Capacity during Evolution of a Designed Enzyme.
J.Am.Chem.Soc., 141, 2019
6EIK
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BU of 6eik by Molmil
A de novo designed heptameric coiled coil CC-Hept-I24E
分子名称: CC-Hept-I24E, FORMIC ACID, GLYCEROL
著者Rhys, G.G, Burton, A.J, Dawson, W.M, Thomas, F, Woolfson, D.N.
登録日2017-09-19
公開日2018-07-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献De Novo-Designed alpha-Helical Barrels as Receptors for Small Molecules.
ACS Synth Biol, 7, 2018
6EIZ
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BU of 6eiz by Molmil
A de novo designed hexameric coiled coil CC-Hex2 with farnesol bound in the channel.
分子名称: (2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, CC-Hex2
著者Rhys, G.G, Burton, A.J, Dawson, W.M, Thomas, F, Woolfson, D.N.
登録日2017-09-19
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献De Novo-Designed alpha-Helical Barrels as Receptors for Small Molecules.
ACS Synth Biol, 7, 2018

 

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