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X-ray structure of H6N6-NS1 delta(80-84) R38A K41A E71G mutant
分子名称:	Non-structural protein 1
著者	Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日	2019-01-23
公開日	2019-07-31
最終更新日	2023-10-11
実験手法	X-RAY DIFFRACTION (3.2 Å)
主引用文献	Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol., 93, 2019

6O01

X-ray structure of H5N1-NS1 R38A K41A G71E mutant
分子名称:	Non-structural protein 1
著者	Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日	2019-02-14
公開日	2019-07-31
最終更新日	2023-10-11
実験手法	X-RAY DIFFRACTION (3 Å)
主引用文献	Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol., 93, 2019

6OQE

X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
分子名称:	Non-structural protein 1
著者	Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日	2019-04-26
公開日	2019-07-31
最終更新日	2023-10-11
実験手法	X-RAY DIFFRACTION (3.899 Å)
主引用文献	Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol., 93, 2019

7L33

X-ray Structure of a Cu-Bound De Novo Designed Peptide Trimer
分子名称:	COPPER (II) ION, Cu-3SCC
著者	Chakraborty, S, Wawrzak, Z, Prasad, P, Mitra, S, Prakash, D.
登録日	2020-12-17
公開日	2021-08-11
最終更新日	2023-10-18
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	De Novo Design of a Self-Assembled Artificial Copper Peptide that Activates and Reduces Peroxide Acs Catalysis, 11, 2021

7ZMZ

Engineered Interleukin 2 bound to CD25 receptor
分子名称:	Interleukin-2, Interleukin-2 receptor subunit alpha
著者	Fyfe, P.K, Moraga, I, Gaggero, S, Mitra, S.
登録日	2022-04-20
公開日	2022-12-14
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (3.2 Å)
主引用文献	IL-2 is inactivated by the acidic pH environment of tumors enabling engineering of a pH-selective mutein. Sci Immunol, 7, 2022

1DE9

HUMAN APE1 ENDONUCLEASE WITH BOUND ABASIC DNA AND MN2+ ION
分子名称:	5'-d(CPTPAPC)-3', 5'-d(GPAPTPCPGPGPTPAPG)-3', 5'-d(P(3DR)PGPAPTPC)-3', ...
著者	Mol, C.D, Izumi, T, Mitra, S, Tainer, J.A.
登録日	1999-11-13
公開日	2000-02-02
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (3 Å)
主引用文献	DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination Nature, 403, 2000

1DEW

CRYSTAL STRUCTURE OF HUMAN APE1 BOUND TO ABASIC DNA
分子名称:	5'-D(GPCPGPTPCPCP(3DR)PCPGPAPCPGPAPCPG)-3', 5'-D(GPTPCPGPTPCPGPGPGPGPAPCPGP*C)-3', MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE, ...
著者	Mol, C.D, Izumi, T, Mitra, S, Tainer, J.A.
登録日	1999-11-15
公開日	2000-02-02
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (2.65 Å)
主引用文献	DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination Nature, 403, 2000

1DE8

HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNA
分子名称:	DNA (5'-D(CPGPAPTPCPGPGPTPAPGPC)-3'), DNA (5'-D(GPCPTPAPCP(3DR)PGPAPTPCPG)-3'), MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE
著者	Mol, C.D, Izumi, T, Mitra, S, Tainer, J.A.
登録日	1999-11-13
公開日	2000-02-02
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (2.95 Å)
主引用文献	DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected Nature, 403, 2000

1N2W

Solution Structure of 8OG:G mismatch containing duplex
分子名称:	5'-D(CPGPCPGPAPAPTPTP(8OG)PGPCPG)-3'
著者	Thiviyanathan, V, Somasunderam, A.D, Hazra, T.K, Mitra, S, Gorenstein, D.G.
登録日	2002-10-24
公開日	2002-11-13
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Solution Structure of a DNA Duplex Containing 8-Hydroxy-2'-Deoxyguanosine Opposite Deoxyguanosine J.Mol.Biol., 325, 2003

4S1G

Renin in complex with (S)-1-(3-fluoro-5-(((S)-1-phenylethyl)carbamoyl)benzyl)-4-isopropyl-4-methyl-6-oxotetrahydropyrimidin-2(1H)-iminium
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 3-{[(4S)-2-amino-4-methyl-6-oxo-4-(propan-2-yl)-5,6-dihydropyrimidin-1(4H)-yl]methyl}-5-fluoro-N-[(1S)-1-phenylethyl]benzamide, Renin
著者	Orth, P.
登録日	2015-01-13
公開日	2015-02-25
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Iminopyrimidinones: A novel pharmacophore for the development of orally active renin inhibitors. Bioorg.Med.Chem.Lett., 25, 2015

2GIU

Human estrogen receptor beta ligand-binding domain in complex with compound 45
分子名称:	(9aS)-4-bromo-9a-butyl-7-hydroxy-1,2,9,9a-tetrahydro-3H-fluoren-3-one, Estrogen receptor beta
著者	Fitzgerald, P.M.D, Sharma, N.
登録日	2006-03-29
公開日	2006-10-10
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	The discovery of tetrahydrofluorenones as a new class of estrogen receptor beta-subtype selective ligands. Bioorg.Med.Chem.Lett., 16, 2006

4XX4

Renin in complex with (4S)-4-isopropyl-4-methyl-6-oxo-1-(3-(2-oxo-4-phenylpyrrolidin-1-yl)benzyl)tetrahydropyrimidin-2(1H)-iminium
分子名称:	(2Z,6S)-2-imino-6-methyl-3-{3-[(4R)-2-oxo-4-phenylpyrrolidin-1-yl]benzyl}-6-(propan-2-yl)tetrahydropyrimidin-4(1H)-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
著者	Orth, P.
登録日	2015-01-29
公開日	2015-02-18
最終更新日	2023-09-27
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Iminopyrimidinones: a novel pharmacophore for the development of orally active renin inhibitors. Bioorg. Med. Chem. Lett., 25, 2015

4XX3

Renin in complex with (S)-1-(3-(benzylcarbamoyl)benzyl)-4-isopropyl-4-methyl-6-oxotetrahydropyrimidin-2(1H)-iminium
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, N-benzyl-3-{[(2Z,4S)-2-imino-4-methyl-6-oxo-4-(propan-2-yl)tetrahydropyrimidin-1(2H)-yl]methyl}benzamide, Renin
著者	Orth, P.
登録日	2015-01-29
公開日	2015-02-18
最終更新日	2023-09-27
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Iminopyrimidinones: a novel pharmacophore for the development of orally active renin inhibitors. Bioorg. Med. Chem. Lett., 25, 2015

4XHM

Archaeoglobus fulgidus thioredoxin 3 M60H
分子名称:	Thioredoxin (Trx-3)
著者	Dey, M, Bjork, R.E, Drennan, C.L.
登録日	2015-01-05
公開日	2015-04-29
最終更新日	2019-11-20
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Rheostat Re-Wired: Alternative Hypotheses for the Control of Thioredoxin Reduction Potentials. Plos One, 10

4DCQ

Crystal Structure of the Fab Fragment of 3B5H10, an Antibody-Specific for Extended Polyglutamine Repeats (orthorhombic form)
分子名称:	1,2-ETHANEDIOL, 3B5H10 FAB Heavy Chain, 3B5H10 FAB Light Chain
著者	Peters-Libeu, C.A, Tran, T, Finkbeiner, S, Weisgraber, K.
登録日	2012-01-18
公開日	2012-02-22
最終更新日	2023-09-13
実験手法	X-RAY DIFFRACTION (1.94 Å)
主引用文献	Disease-associated polyglutamine stretches in monomeric huntingtin adopt a compact structure. J.Mol.Biol., 421, 2012

5IWS

Crystal structure of the transporter MalT, the EIIC domain from the maltose-specific phosphotransferase system
分子名称:	Protein-N(Pi)-phosphohistidine-sugar phosphotransferase (Enzyme II of the phosphotransferase system) (PTS system glucose-specific IIBC component), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者	McCoy, J.G, Ren, Z, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
登録日	2016-03-22
公開日	2016-05-25
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.551 Å)
主引用文献	The Structure of a Sugar Transporter of the Glucose EIIC Superfamily Provides Insight into the Elevator Mechanism of Membrane Transport. Structure, 24, 2016

5YJJ

Crystal structure of PNPase from Staphylococcus epidermidis
分子名称:	MAGNESIUM ION, PHOSPHATE ION, Polyribonucleotide nucleotidyltransferase
著者	Raj, R, Gopal, B.
登録日	2017-10-10
公開日	2018-01-31
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2. Biochem. Biophys. Res. Commun., 495, 2018

4HNO

High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima
分子名称:	1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
著者	Shin, D.S, Hosfield, D.J, Arvai, A.S, Tsutakawa, S.E, Tainer, J.A.
登録日	2012-10-20
公開日	2013-01-23
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (0.9194 Å)
主引用文献	Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes. J.Biol.Chem., 288, 2013

4IEM

Human apurinic/apyrimidinic endonuclease (APE1) with product DNA and Mg2+
分子名称:	DNA (5'-D(CPGPAPTPCPGPGPTPAPGPC)-3'), DNA (5'-D(GPCPTPAPC)-3'), DNA (5'-D(P(3DR)PGPAPTPCPG)-3'), ...
著者	Tsutakawa, S.E, Mol, C.D, Arvai, A.S, Tainer, J.A.
登録日	2012-12-13
公開日	2013-01-23
最終更新日	2024-02-28
実験手法	X-RAY DIFFRACTION (2.3936 Å)
主引用文献	Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes. J.Biol.Chem., 288, 2013

4GS7

Structure of the Interleukin-15 quaternary complex
分子名称:	1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Ring, A.M, Ozkan, E, Feng, D, Garcia, K.C.
登録日	2012-08-27
公開日	2012-11-07
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	Mechanistic and structural insight into the functional dichotomy between IL-2 and IL-15. Nat.Immunol., 13, 2012

3S96

Crystal structure of 3B5H10
分子名称:	3B5H10 FAB heavy chain, 3B5H10 FAB light chain
著者	Weisgraber, K, Peters-Libeu, C, Rutenber, E, Newhouse, Y, Finkbeiner, S.
登録日	2011-05-31
公開日	2012-02-15
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Disease-associated polyglutamine stretches in monomeric huntingtin adopt a compact structure. J.Mol.Biol., 421, 2012

2N8L

Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the KH3 RNA target
分子名称:	Insulin-like growth factor 2 mRNA-binding protein 1, RNA (5'-R(PGPCPAPCPAPCPCPC)-3')
著者	Nicastro, G, Candel, A.M, Ramos, A, Hollingworth, D.
登録日	2015-10-21
公開日	2017-01-25
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the RNA target GCACACCC To be Published

2N8M

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target
分子名称:	Insulin-like growth factor 2 mRNA-binding protein 1, RNA (5'-R(PUPCPGPGPAPCP*U)-3')
著者	Nicastro, G, Ramos, A, Candel, A, Hollingworth, D.
登録日	2015-10-21
公開日	2017-01-25
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the RNA target UCGGACU To be Published

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