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5ZO2
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BU of 5zo2 by Molmil
Crystal structure of mouse nectin-like molecule 4 (mNecl-4) full ectodomain in complex with mouse nectin-like molecule 1 (mNecl-1) Ig1 domain, 3.3A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 3, Cell adhesion molecule 4
著者Liu, X, An, T, Li, D, Fan, Z, Xiang, P, Li, C, Ju, W, Li, J, Hu, G, Qin, B, Yin, B, Wojdyla, J.A, Wang, M, Yuan, J, Qiang, B, Shu, P, Cui, S, Peng, X.
登録日2018-04-12
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4U87
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BU of 4u87 by Molmil
Crystal structure of the Ba-soaked C2 crystal form of pMV158 replication initiator RepB (P3221 space group)
分子名称: BARIUM ION, CHLORIDE ION, MANGANESE (II) ION, ...
著者Boer, D.R, Ruiz Maso, J.A, del Solar, G, Coll, M.
登録日2014-08-01
公開日2015-08-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158.
Sci Rep, 6, 2016
1CCM
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BU of 1ccm by Molmil
DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL
分子名称: CRAMBIN
著者Bonvin, A.M.J.J, Rullmann, J.A.C, Lamerichs, R.M.J.N, Boelens, R, Kaptein, R.
登録日1993-04-14
公開日1993-10-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献"Ensemble" iterative relaxation matrix approach: a new NMR refinement protocol applied to the solution structure of crambin.
Proteins, 15, 1993
1ISC
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BU of 1isc by Molmil
STRUCTURE-FUNCTION IN E. COLI IRON SUPEROXIDE DISMUTASE: COMPARISONS WITH THE MANGANESE ENZYME FROM T. THERMOPHILUS
分子名称: AZIDE ION, FE (III) ION, IRON(III) SUPEROXIDE DISMUTASE
著者Lah, M.S, Dixon, M, Pattridge, K.A, Stallings, W.C, Fee, J.A, Ludwig, M.L.
登録日1994-07-12
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-function in Escherichia coli iron superoxide dismutase: comparisons with the manganese enzyme from Thermus thermophilus.
Biochemistry, 34, 1995
1ISA
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BU of 1isa by Molmil
STRUCTURE-FUNCTION IN E. COLI IRON SUPEROXIDE DISMUTASE: COMPARISONS WITH THE MANGANESE ENZYME FROM T. THERMOPHILUS
分子名称: FE (II) ION, IRON(II) SUPEROXIDE DISMUTASE
著者Lah, M.S, Dixon, M, Pattridge, K.A, Stallings, W.C, Fee, J.A, Ludwig, M.L.
登録日1994-07-12
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-function in Escherichia coli iron superoxide dismutase: comparisons with the manganese enzyme from Thermus thermophilus.
Biochemistry, 34, 1995
4TW3
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BU of 4tw3 by Molmil
Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound
分子名称: 1,2-ETHANEDIOL, Aldehyde decarbonylase, FE (III) ION, ...
著者Buer, B.C, Paul, B, Das, D, Stuckey, J.A, Marsh, E.N.G.
登録日2014-06-29
公開日2014-10-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound.
Acs Chem.Biol., 9, 2014
4UFC
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BU of 4ufc by Molmil
Crystal structure of the GH95 enzyme BACOVA_03438
分子名称: CACODYLATE ION, CALCIUM ION, GH95, ...
著者Rogowski, A, Briggs, J.A, Mortimer, J.C, Tryfona, T, Terrapon, N, Lowe, E.C, Basle, A, Morland, C, Day, A.M, Zheng, H, Rogers, T.E, Thompson, P, Hawkins, A.R, Yadav, M.P, Henrissat, B, Martens, E.C, Dupree, P, Gilbert, H.J, Bolam, D.N.
登録日2015-03-16
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Glycan Complexity Dictates Microbial Resource Allocation in the Large Intestine.
Nat.Commun., 6, 2015
4TWS
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BU of 4tws by Molmil
Gadolinium Derivative of Tetragonal Hen Egg-White Lysozyme at 1.45 A Resolution
分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
著者Holton, J.M, Classen, S, Frankel, K.A, Tainer, J.A.
登録日2014-07-01
公開日2014-08-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The R-factor gap in macromolecular crystallography: an untapped potential for insights on accurate structures.
Febs J., 281, 2014
2SOD
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BU of 2sod by Molmil
DETERMINATION AND ANALYSIS OF THE 2 ANGSTROM STRUCTURE OF COPPER, ZINC SUPEROXIDE DISMUTASE
分子名称: COPPER (II) ION, COPPER,ZINC SUPEROXIDE DISMUTASE, ZINC ION
著者Tainer, J.A, Getzoff, E.D, Richardson, J.S, Richardson, D.C.
登録日1980-03-25
公開日1980-05-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Determination and analysis of the 2 A-structure of copper, zinc superoxide dismutase.
J.Mol.Biol., 160, 1982
1SDE
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BU of 1sde by Molmil
Toward Better Antibiotics: Crystal Structure Of D-Ala-D-Ala Peptidase inhibited by a novel bicyclic phosphate inhibitor
分子名称: 2-[(DIOXIDOPHOSPHINO)OXY]BENZOATE, D-alanyl-D-alanine carboxypeptidase, GLYCEROL
著者Silvaggi, N.R, Kaur, K, Adediran, S.A, Pratt, R.F, Kelly, J.A.
登録日2004-02-13
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Toward better antibiotics: crystallographic studies of a novel class of DD-peptidase/beta-lactamase inhibitors
Biochemistry, 43, 2004
2VNJ
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BU of 2vnj by Molmil
X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH NADP. FORM I AT 2.13 ANGSTROMS RESOLUTION
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH:FERREDOXIN REDUCTASE, ...
著者Perez-Dorado, I, Hermoso, J.A.
登録日2008-02-05
公開日2008-11-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Coenzyme Binding and Hydride Transfer in Rhodobacter Capsulatus Ferredoxin/Flavodoxin Nadp(H) Oxidoreductase.
Biochim.Biophys.Acta, 1794, 2009
1SHJ
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BU of 1shj by Molmil
Caspase-7 in complex with DICA allosteric inhibitor
分子名称: 2-(2,4-DICHLORO-PHENOXY)-N-(2-MERCAPTO-ETHYL)-ACETAMIDE, Caspase-7, SULFATE ION
著者Hardy, J.A, Lam, J, Nguyen, J.T, O'Brien, T, Wells, J.A.
登録日2004-02-25
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of an allosteric site in the caspases
Proc.Natl.Acad.Sci.USA, 101, 2004
1SHL
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BU of 1shl by Molmil
CASPASE-7 IN COMPLEX WITH FICA ALLOSTERIC INHIBITOR
分子名称: 5-FLUORO-1H-INDOLE-2-CARBOXYLIC ACID-(2-MERCAPTO-ETHYL)-AMIDE, Caspase-7
著者Hardy, J.A, Lam, J, Nguyen, J.T, O'Brien, T, Wells, J.A.
登録日2004-02-25
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery of an allosteric site in the caspases
Proc.Natl.Acad.Sci.USA, 101, 2004
2RJ0
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BU of 2rj0 by Molmil
B-specific alpha-1,3-galactosyltransferase G176R mutant + UDP+ Mn2+
分子名称: GLYCEROL, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, ...
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RJ8
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BU of 2rj8 by Molmil
B-specific alpha-1,3-galactosyltransferase (GTB) +UDP+ H-antigen disaccharide
分子名称: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RJ1
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BU of 2rj1 by Molmil
B-specific alpha-1,3-galactosyltransferase (GTB) G176R mutant + UDP + H-antigen disaccharide
分子名称: GLYCEROL, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, ...
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RIT
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BU of 2rit by Molmil
Unliganded B-specific-1,3-galactosyltransferase (GTB)
分子名称: GLYCEROL, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-12
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RJ7
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BU of 2rj7 by Molmil
B-specific alpha-1,3-galactosyltransferase G176R S235G mutant (AABB) + UDPGal + Deoxy-acceptor
分子名称: GALACTOSE-URIDINE-5'-DIPHOSPHATE, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, ...
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RJ6
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B-specific alpha-1,3-galactosyltransferase G176R S235G mutant (AABB) + H-antigen disaccharide
分子名称: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, octyl 2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-galactopyranoside
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RIZ
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BU of 2riz by Molmil
Unliganded B-specific-1,3-galactosyltransferase G176R mutant (ABBB)
分子名称: GLYCEROL, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
2RJ5
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BU of 2rj5 by Molmil
B-specific alpha-1,3-galactosyltransferase G176R S235G mutant (AABB) +UDP
分子名称: GLYCEROL, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, ...
著者Evans, S.V, Alfaro, J.A.
登録日2007-10-14
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
1S0R
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BU of 1s0r by Molmil
Bovine Pancreatic Trypsin inhibited with Benzamidine at Atomic resolution
分子名称: BENZAMIDINE, CALCIUM ION, Trypsinogen
著者Chamorro Gavilanes, J.A, Garca-Granda, S.
登録日2004-01-02
公開日2005-01-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Pancratic bovine Trypsin native and inhibited with Benzamidine from synchotron data.
To be Published
7OH4
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BU of 7oh4 by Molmil
Cryo-EM structure of Drs2p-Cdc50p in the E1 state with PI4P and Mg2+ bound
分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
登録日2021-05-09
公開日2021-06-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021
7OH7
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Cryo-EM structure of Drs2p-Cdc50p in the E1-AMPPCP state with PI4P bound
分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell division control protein 50, ...
著者Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
登録日2021-05-09
公開日2021-06-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021
7OH6
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Cryo-EM structure of Drs2p-Cdc50p in the [PS]E2-AlFx state
分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
登録日2021-05-09
公開日2021-06-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021

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