Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5WRV
DownloadVisualize
BU of 5wrv by Molmil
Complex structure of human SRP72/SRP68
分子名称: ACETATE ION, GLYCEROL, SODIUM ION, ...
著者Gao, Y, Chen, Z.
登録日2016-12-04
公開日2017-06-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Human apo-SRP72 and SRP68/72 complex structures reveal the molecular basis of protein translocation
J Mol Cell Biol, 9, 2017
8QQK
DownloadVisualize
BU of 8qqk by Molmil
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, ...
著者Gao, Y, Zhang, Y, Hakke, S, Peters, P.J, Ravelli, R.B.G.
登録日2023-10-05
公開日2024-04-24
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structure of cytochrome bo 3 quinol oxidase assembled in peptidiscs reveals an "open" conformation for potential ubiquinone-8 release.
Biochim Biophys Acta Bioenerg, 1865, 2024
6PZQ
DownloadVisualize
BU of 6pzq by Molmil
Structure of the human respiratory syncytial virus M2-1 protein in complex with a short positive-sense gene-end RNA
分子名称: Matrix M2-1, RNA (5'-R(P*GP*UP*UP*AP*AP*U)-3'), ZINC ION
著者Gao, Y, Cao, D, Liang, B.
登録日2019-08-01
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structure of the Human Respiratory Syncytial Virus M2-1 Protein in Complex with a Short Positive-Sense Gene-End RNA.
Structure, 28, 2020
6OYA
DownloadVisualize
BU of 6oya by Molmil
Structure of the Rhodopsin-Transducin-Nanobody Complex
分子名称: Camelid antibody VHH fragment, Gt-alpha/Gi1-alpha chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Gao, Y, Hu, H, Ramachandran, S, Erickson, J.W, Cerione, R.A, Skiniotis, G.
登録日2019-05-14
公開日2019-07-24
最終更新日2019-12-04
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures of the Rhodopsin-Transducin Complex: Insights into G-Protein Activation.
Mol.Cell, 75, 2019
6OY9
DownloadVisualize
BU of 6oy9 by Molmil
Structure of the Rhodopsin-Transducin Complex
分子名称: Gt-alpha/Gi1-alpha chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, ...
著者Gao, Y, Hu, H, Ramachandran, S, Erickson, J.W, Cerione, R.A, Skiniotis, G.
登録日2019-05-14
公開日2019-07-24
最終更新日2019-12-04
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures of the Rhodopsin-Transducin Complex: Insights into G-Protein Activation.
Mol.Cell, 75, 2019
1CL4
DownloadVisualize
BU of 1cl4 by Molmil
NUCLEOCAPSID PROTEIN FROM MASON-PFIZER MONKEY VIRUS (MPMV)
分子名称: PROTEIN (GAG POLYPROTEIN), ZINC ION
著者Gao, Y, Kaluarachchi, K, Giedroc, D.P.
登録日1999-05-06
公開日1999-05-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of Mason-Pfizer monkey virus (MPMV) nucleocapsid protein.
Protein Sci., 7, 1998
7JSN
DownloadVisualize
BU of 7jsn by Molmil
Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6
分子名称: 2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONE, GUANOSINE-3',5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Gao, Y, Eskici, G, Ramachandran, S, Skiniotis, G, Cerione, R.A.
登録日2020-08-15
公開日2020-10-21
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6.
Mol.Cell, 80, 2020
7M3G
DownloadVisualize
BU of 7m3g by Molmil
Asymmetric Activation of the Calcium Sensing Receptor Homodimer
分子名称: 2-[4-[(3S)-3-[[(1R)-1-naphthalen-1-ylethyl]amino]pyrrolidin-1-yl]phenyl]ethanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gao, Y, Robertson, M.J, Zhang, C, Meyerowitz, J.G, Panova, O, Skiniotis, G.
登録日2021-03-18
公開日2021-06-30
最終更新日2021-07-21
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Asymmetric activation of the calcium-sensing receptor homodimer.
Nature, 595, 2021
7M3J
DownloadVisualize
BU of 7m3j by Molmil
Asymmetric Activation of the Calcium Sensing Receptor Homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-chloro-6-[(2R)-2-hydroxy-3-{[2-methyl-1-(naphthalen-2-yl)propan-2-yl]amino}propoxy]benzonitrile, ...
著者Gao, Y, Robertson, M.J, Zhang, C, Meyerowitz, J.G, Panova, O, Skiniotis, G.
登録日2021-03-18
公開日2021-06-30
最終更新日2021-07-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Asymmetric activation of the calcium-sensing receptor homodimer.
Nature, 595, 2021
7M3E
DownloadVisualize
BU of 7m3e by Molmil
Asymmetric Activation of the Calcium Sensing Receptor Homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-chloro-6-[(2R)-2-hydroxy-3-{[2-methyl-1-(naphthalen-2-yl)propan-2-yl]amino}propoxy]benzonitrile, ...
著者Gao, Y, Robertson, M.J, Zhang, C, Meyerowitz, J.G, Panova, O, Skiniotis, G.
登録日2021-03-18
公開日2021-06-30
最終更新日2021-07-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Asymmetric activation of the calcium-sensing receptor homodimer.
Nature, 595, 2021
7M3F
DownloadVisualize
BU of 7m3f by Molmil
Asymmetric Activation of the Calcium Sensing Receptor Homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gao, Y, Robertson, M.J, Zhang, C, Meyerowitz, J.G, Panova, O, Skiniotis, G.
登録日2021-03-18
公開日2021-06-30
最終更新日2021-07-21
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Asymmetric activation of the calcium-sensing receptor homodimer.
Nature, 595, 2021
7BST
DownloadVisualize
BU of 7bst by Molmil
EcoR124I-Ocr in the Intermediate State
分子名称: Overcome classical restriction gp0.3, Type I restriction enzyme EcoR124II M protein, Type I restriction enzyme R Protein, ...
著者Gao, Y, Gao, P.
登録日2020-03-31
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.37 Å)
主引用文献Structural insights into assembly, operation and inhibition of a type I restriction-modification system.
Nat Microbiol, 5, 2020
7BTR
DownloadVisualize
BU of 7btr by Molmil
EcoR124I-ArdA in the Restriction-Alleviation State
分子名称: Antirestriction protein ArdA, Type I restriction enzyme EcoR124II M protein, Type I restriction enzyme R Protein, ...
著者Gao, Y, Gao, P.
登録日2020-04-02
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.54 Å)
主引用文献Structural insights into assembly, operation and inhibition of a type I restriction-modification system.
Nat Microbiol, 5, 2020
7BTO
DownloadVisualize
BU of 7bto by Molmil
EcoR124I-ArdA in the Translocation State
分子名称: Antirestriction protein ArdA, Type I restriction enzyme EcoR124II M protein, Type I restriction enzyme R Protein, ...
著者Gao, Y, Gao, P.
登録日2020-04-02
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Structural insights into assembly, operation and inhibition of a type I restriction-modification system.
Nat Microbiol, 5, 2020
7BTQ
DownloadVisualize
BU of 7btq by Molmil
EcoR124I-DNA in the Restriction-Alleviation State
分子名称: DNA (64-MER), Type I restriction enzyme EcoR124II M protein, Type I restriction enzyme R Protein, ...
著者Gao, Y, Gao, P.
登録日2020-04-02
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.54 Å)
主引用文献Structural insights into assembly, operation and inhibition of a type I restriction-modification system.
Nat Microbiol, 5, 2020
7BTP
DownloadVisualize
BU of 7btp by Molmil
EcoR124I-Ocr in Restriction-Alleviation State
分子名称: Overcome classical restriction gp0.3, Type I restriction enzyme EcoR124II M protein, Type I restriction enzyme R Protein, ...
著者Gao, Y, Gao, P.
登録日2020-04-02
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.01 Å)
主引用文献Structural insights into assembly, operation and inhibition of a type I restriction-modification system.
Nat Microbiol, 5, 2020
2DU9
DownloadVisualize
BU of 2du9 by Molmil
crystal structure of the transcriptional factor from C.glutamicum
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Predicted transcriptional regulators
著者Gao, Y, Yao, M, Tanaka, I.
登録日2006-07-20
公開日2007-07-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode
Protein Sci., 16, 2007
7BTF
DownloadVisualize
BU of 7btf by Molmil
SARS-CoV-2 RNA-dependent RNA polymerase in complex with cofactors in reduced condition
分子名称: Non-structural protein 7, Non-structural protein 8, RNA-directed RNA polymerase, ...
著者Gao, Y, Yan, L, Huang, Y, Liu, F, Cao, L, Wang, T, Wang, Q, Lou, Z, Rao, Z.
登録日2020-04-01
公開日2020-04-08
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structure of the RNA-dependent RNA polymerase from COVID-19 virus.
Science, 368, 2020
5IS0
DownloadVisualize
BU of 5is0 by Molmil
Structure of TRPV1 in complex with capsazepine, determined in lipid nanodisc
分子名称: Transient receptor potential cation channel subfamily V member 1, capsazepine
著者Gao, Y, Cao, E, Julius, D, Cheng, Y.
登録日2016-03-15
公開日2016-05-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
5IRX
DownloadVisualize
BU of 5irx by Molmil
Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc
分子名称: (2S)-2-(acetyloxy)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}propyl pentanoate, (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate, (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium, ...
著者Gao, Y, Cao, E, Julius, D, Cheng, Y.
登録日2016-03-14
公開日2016-05-25
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
5IRZ
DownloadVisualize
BU of 5irz by Molmil
Structure of TRPV1 determined in lipid nanodisc
分子名称: (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4S,5S,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-3-(pentanoyloxy)propan-2-yl decanoate, (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate, (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium, ...
著者Gao, Y, Cao, E, Julius, D, Cheng, Y.
登録日2016-03-15
公開日2016-05-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
3UBU
DownloadVisualize
BU of 3ubu by Molmil
Crystal structure of agkisacucetin, a GpIb-binding snaclec (snake C-type lectin) that inhibits platelet
分子名称: Agglucetin subunit alpha-1, Agglucetin subunit beta-2, GLYCEROL, ...
著者Gao, Y, Ge, H, Chen, H, Li, H, Liu, Y, Niu, L, Teng, M.
登録日2011-10-25
公開日2012-04-11
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of agkisacucetin, a Gpib-binding snake C-type lectin that inhibits platelet adhesion and aggregation.
Proteins, 2012
5KFC
DownloadVisualize
BU of 5kfc by Molmil
Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 180s
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
5KFL
DownloadVisualize
BU of 5kfl by Molmil
Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 600s
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016
5KFX
DownloadVisualize
BU of 5kfx by Molmil
Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 300s
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
著者Gao, Y, Yang, W.
登録日2016-06-12
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science, 352, 2016

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon