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2MW2
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BU of 2mw2 by Molmil
Hha-H-NS46 charge zipper complex
分子名称: DNA-binding protein H-NS, Hemolysin expression-modulating protein Hha
著者Cordeiro, T.N, Garcia, J, Bernado, P, Millet, O, Pons, M.
登録日2014-10-24
公開日2015-07-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Three-protein Charge Zipper Stabilizes a Complex Modulating Bacterial Gene Silencing.
J. Biol. Chem., 290, 2015
2LEV
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BU of 2lev by Molmil
Structure of the DNA complex of the C-Terminal domain of Ler
分子名称: DNA (5'-D(*CP*CP*TP*AP*TP*CP*AP*AP*TP*TP*AP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*TP*AP*AP*TP*TP*GP*AP*TP*AP*GP*G)-3'), Ler
著者Cordeiro, T.N, Schimdt, H, Madrid, C, Juarez, A, Bernado, P, Grisienger, C, Garcia, J, Pons, M.
登録日2011-06-23
公開日2011-12-07
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Indirect DNA Readout by an H-NS Related Protein: Structure of the DNA Complex of the C-Terminal Domain of Ler.
Plos Pathog., 7, 2011
4D2G
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BU of 4d2g by Molmil
Crystal structure of human PCNA in complex with p15 peptide
分子名称: P15, PROLIFERATING CELL NUCLEAR ANTIGEN
著者DeBiasio, A, Ibanez, A, Mortuza, G, Molina, R, Cordeiro, T.N, Castillo, F, Villate, M, Merino, N, Lelli, M, Diercks, T, Luque, I, Bernardo, P, Montoya, G, Blanco, F.J.
登録日2014-05-09
公開日2015-03-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of P15(Paf)-PCNA Complex and Implications for Clamp Sliding During DNA Replication and Repair.
Nat.Commun., 6, 2015
2MN2
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BU of 2mn2 by Molmil
3D structure of YmoB, a modulator of biofilm formation
分子名称: YmoB
著者Marimon, O, Cordeiro, T.N, Amata, I, Pons, M.
登録日2014-03-26
公開日2015-04-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An oxygen-sensitive toxin-antitoxin system.
Nat Commun, 7, 2016
6SYY
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BU of 6syy by Molmil
Crystal structure of McoA multicopper oxidase from the hyperthermophile Aquifex aeolicus
分子名称: COPPER (II) ION, OXYGEN ATOM, Periplasmic cell division protein (SufI)
著者Borges, P.T, Brissos, V, Cordeiro, T.N, Martins, L.O, Frazao, C.
登録日2019-10-01
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献The Methionine-Rich Loop of Multicopper Oxidase McoA follows Open-To-Close Transitions with a Role in Enzyme Catalysis
Acs Catalysis, 2020
6TTD
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BU of 6ttd by Molmil
Crystal structure of McoA multicopper oxidase 2F4 variant from the hyperthermophile Aquifex aeolicus
分子名称: COPPER (II) ION, GLYCEROL, Multicopper oxidase, ...
著者Borges, P.T, Brissos, V, Cordeiro, T.N, Martins, L.O, Frazao, C.
登録日2019-12-26
公開日2021-04-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Distal Mutations Shape Substrate-Binding Sites during Evolution of a Metallo-Oxidase into a Laccase
Acs Catalysis, 2022
6ZMN
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BU of 6zmn by Molmil
Crystal structure of the Smad3-Smad5 MH1 domain chimera bound to the GGCGC site
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), ...
著者Pluta, R, Macias, M.J.
登録日2020-07-03
公開日2020-08-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.333 Å)
主引用文献Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
6EHT
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BU of 6eht by Molmil
Modulation of PCNA sliding surface by p15PAF suggests a suppressive mechanism for cisplatin-induced DNA lesion bypass by pol eta holoenzyme
分子名称: DNA (5'-D(P*AP*TP*AP*CP*GP*AP*TP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*AP*TP*CP*GP*TP*AP*T)-3'), PCNA-associated factor, ...
著者De March, M, Barrera-Vilarmau, S, Mentegari, E, Merino, N, Bressan, E, Maga, G, Crehuet, R, Onesti, S, Blanco, F.J, De Biasio, A.
登録日2017-09-15
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献p15PAF binding to PCNA modulates the DNA sliding surface.
Nucleic Acids Res., 46, 2018
6FZT
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BU of 6fzt by Molmil
Crystal structure of Smad8_9-MH1 bound to the GGCGC site.
分子名称: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), GLYCEROL, Mothers against decapentaplegic homolog 9, ...
著者Kaczmarska, Z, Marquez, J.A, Macias, M.J.
登録日2018-03-15
公開日2019-10-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes
Computational and Structural Biotechnology Journal, 19, 2021
4ZTD
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BU of 4ztd by Molmil
Crystal Structure of Human PCNA in complex with a TRAIP peptide
分子名称: ALA-GLY-ALA-GLY-ALA, ALA-PHE-GLN-ALA-LYS-LEU-ASP-THR-PHE-LEU-TRP-SER, Proliferating cell nuclear antigen
著者Montoya, G, Mortuza, G.B, Blanco, F.J, Ibanez de Opakua, A.
登録日2015-05-14
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献TRAIP is a PCNA-binding ubiquitin ligase that protects genome stability after replication stress.
J.Cell Biol., 212, 2016
6FZS
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BU of 6fzs by Molmil
Crystal structure of Smad5-MH1 bound to the GGCGC site.
分子名称: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
著者Kaczmarska, Z, Marquez, J.A, Macias, M.J.
登録日2018-03-15
公開日2019-10-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes
Computational and Structural Biotechnology Journal, 19, 2021
6TBZ
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BU of 6tbz by Molmil
Crystal structure of the MH1 domain of Smad5-Smad3 chimera construct bound to the GGCGC site
分子名称: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
著者Pluta, R, Macias, M.J.
登録日2019-11-04
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
6TCE
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BU of 6tce by Molmil
Crystal structure of the GGCT site-bound MH1 domain of Smad5 containing a GGGS insertion in the Loop1
分子名称: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
著者Pluta, R, Macias, M.J.
登録日2019-11-05
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
6GIS
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BU of 6gis by Molmil
Structural basis of human clamp sliding on DNA
分子名称: DNA (5'-D(P*AP*TP*AP*CP*GP*AP*TP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*AP*TP*CP*GP*TP*AP*T)-3'), Proliferating cell nuclear antigen
著者De March, M, Merino, N, Barrera-Vilarmau, S, Crehuet, R, Onesti, S, Blanco, F.J, De Biasio, A.
登録日2018-05-15
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Structural basis of human PCNA sliding on DNA.
Nat Commun, 8, 2017

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