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6VU4
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BU of 6vu4 by Molmil
Structure of a beta-hairpin peptide mimic derived from Abeta 14-36
分子名称: Beta-hairpin Amyloid-beta precursor peptide mimic, CHLORIDE ION, IODIDE ION
著者Wierzbicki, M, Kreutzer, A, Samdin, T, Nowick, J.S.
登録日2020-02-14
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.077 Å)
主引用文献Effects of N-Terminal Residues on the Assembly of Constrained beta-Hairpin Peptides Derived from A beta.
J.Am.Chem.Soc., 142, 2020
7JRH
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BU of 7jrh by Molmil
X-ray crystal structure of a cyclic peptide containing medin(19-25) and medin(31-37)
分子名称: CALCIUM ION, Cyclic peptide ASP-GLN-TRP-MLE-GLN-VAL-ASP-ORD-GLU-VAL-THR-GLY-ILE-ILE-THR-ORD
著者Wierzbicki, M, Howitz, W.J, Nowick, J.S.
登録日2020-08-12
公開日2020-09-09
最終更新日2020-09-30
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Interpenetrating Cubes in the X-ray Crystallographic Structure of a Peptide Derived from Medin 19-36 .
J.Am.Chem.Soc., 142, 2020
7LIB
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BU of 7lib by Molmil
X-ray crystal structure of a cyclic peptide containing beta-2-microglobulin (63-69) and a gamma-methylornithine turn unit
分子名称: Cyclic peptide ORD-TYR-LEU-LEU-PHI-TYR-THR-GLU-GMO-LYS-VAL-THR-MVA-THR-VAL-LYS
著者Wierzbicki, M, Nowick, J.S, Li, X.
登録日2021-01-26
公開日2021-08-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献An Improved Turn Structure for Inducing beta-Hairpin Formation in Peptides.
Angew.Chem.Int.Ed.Engl., 60, 2021
3P4J
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BU of 3p4j by Molmil
Ultra-high resolution structure of d(CGCGCG)2 Z-DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE
著者Brzezinski, K, Brzuszkiewicz, A, Dauter, M, Kubicki, M, Jaskolski, M, Dauter, Z.
登録日2010-10-06
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (0.55 Å)
主引用文献High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A.
Nucleic Acids Res., 39, 2011
2G7L
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BU of 2g7l by Molmil
Crystal structure of putative transcription regulator SCO7704 from Streptomyces coelicor
分子名称: TetR-family transcriptional regulator
著者Ezersky, A, Lunin, V.V, Skarina, T, Wierzbicka, M, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-02-28
公開日2006-03-14
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of putative transcription regulator SCO7704 from Streptomyces coelicor
To be Published
6E00
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BU of 6e00 by Molmil
Structure of a N-Me-p-iodo-D-Phe1,N-Me-D-Gln4,Lys10-teixobactin analogue
分子名称: N-Me-p-iodo-D-Phe1,N-Me-D-Gln4,Lys10-teixobactin analogue, SULFATE ION
著者Nowick, J.S, Yang, H, Wierzbicki, M.
登録日2018-07-05
公開日2018-10-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray Crystallographic Structure of a Teixobactin Derivative Reveals Amyloid-like Assembly.
J. Am. Chem. Soc., 140, 2018
6XMX
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BU of 6xmx by Molmil
Cryo-EM structure of BCL6 bound to BI-3802
分子名称: 2-[6-[[5-chloranyl-2-[(3~{S},5~{R})-3,5-dimethylpiperidin-1-yl]pyrimidin-4-yl]amino]-1-methyl-2-oxidanylidene-quinolin-3-yl]oxy-~{N}-methyl-ethanamide, B-cell lymphoma 6 protein
著者Yoon, H, Burman, S.S.R, Hunkeler, M, Nowak, R.P, Fischer, E.S.
登録日2020-07-01
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Small-molecule-induced polymerization triggers degradation of BCL6.
Nature, 588, 2020
6TD3
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BU of 6td3 by Molmil
Structure of DDB1 bound to CR8-engaged CDK12-cyclinK
分子名称: (2R)-2-({9-(1-methylethyl)-6-[(4-pyridin-2-ylbenzyl)amino]-9H-purin-2-yl}amino)butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Bunker, R.D, Petzold, G, Kozicka, Z, Thoma, N.H.
登録日2019-11-07
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献The CDK inhibitor CR8 acts as a molecular glue degrader that depletes cyclin K.
Nature, 585, 2020
7KXS
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BU of 7kxs by Molmil
Computational design of constitutively active cGAS
分子名称: Cyclic GMP-AMP synthase, ZINC ION
著者Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P.
登録日2020-12-04
公開日2021-12-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Computational design of constitutively active cGAS.
Nat.Struct.Mol.Biol., 30, 2023
7LZ3
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BU of 7lz3 by Molmil
Computational design of constitutively active cGAS
分子名称: Cyclic GMP-AMP synthase, GLYCEROL, ZINC ION
著者Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P.
登録日2021-03-08
公開日2022-03-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Computational design of constitutively active cGAS.
Nat.Struct.Mol.Biol., 30, 2023
8GBX
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BU of 8gbx by Molmil
Crystal structure of PC39-50I, an anti-HIV broadly neutralizing antibody
分子名称: PC39-50I Fab heavy chain, PC39-50I Fab light chain
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GBY
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BU of 8gby by Molmil
Crystal structure of PC39-50E, an anti-HIV broadly neutralizing antibody
分子名称: GLYCEROL, PC39-50E Fab heavy chain, PC39-50E Fab light chain
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GBW
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BU of 8gbw by Molmil
Crystal structure of PC39-23D, an anti-HIV broadly neutralizing antibody
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PC39-23D Fab heavy chain, ...
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GC0
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BU of 8gc0 by Molmil
Crystal structure of PC39-50L, an anti-HIV broadly neutralizing antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PC39-50L Fab heavy chain, PC39-50L Fab light chain
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GBV
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BU of 8gbv by Molmil
Crystal structure of PC39-17A, an anti-HIV broadly neutralizing antibody
分子名称: 1,2-ETHANEDIOL, ACETATE ION, PC39-17A Fab heavy chain, ...
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GC1
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BU of 8gc1 by Molmil
Crystal structure of the unmutated common ancestor (UCA) of the PC39-1 anti-HIV broadly neutralizing antibody lineage
分子名称: PC39-1 UCA Fab heavy chain, PC39-1 UCA Fab light chain
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GBZ
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BU of 8gbz by Molmil
Crystal structure of PC39-55C, an anti-HIV broadly neutralizing antibody
分子名称: DI(HYDROXYETHYL)ETHER, PC39-55C Fab heavy chain, PC39-55C Fab light chain
著者Murrell, S, Omorodion, O, Wilson, I.A.
登録日2023-02-28
公開日2023-06-07
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
5JZQ
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BU of 5jzq by Molmil
Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals massive presence of multiple conformations
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Drozdzal, P, Gilski, M, Jaskolski, M.
登録日2016-05-17
公開日2016-11-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals the massive presence of alternate conformations.
Acta Crystallogr D Struct Biol, 72, 2016
4R15
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BU of 4r15 by Molmil
High-resolution crystal structure of Z-DNA in complex with Cr3+ cations
分子名称: CHROMIUM ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M.
登録日2014-08-04
公開日2015-03-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献High-resolution crystal structure of Z-DNA in complex with Cr(3+) cations.
J.Biol.Inorg.Chem., 20, 2015
9B9R
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BU of 9b9r by Molmil
Cryo-EM structure of the ZBTB5 BTB domain filament
分子名称: Zinc finger and BTB domain-containing protein 5
著者Park, J, Hunkeler, M, Fischer, E.S.
登録日2024-04-03
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Polymerization of ZBTB transcription factors regulates chromatin occupancy.
Mol.Cell, 84, 2024
9B9V
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BU of 9b9v by Molmil
Cryo-EM structure of the ZBTB9 BTB domain filament
分子名称: Zinc finger and BTB domain-containing protein 9
著者Park, J, Hunkeler, M, Fischer, E.S.
登録日2024-04-03
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献Polymerization of ZBTB transcription factors regulates chromatin occupancy.
Mol.Cell, 84, 2024
5EBI
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BU of 5ebi by Molmil
Crystal structure of a DNA-RNA chimera in complex with Ba2+ ions: a case of unusual multi-domain twinning
分子名称: BARIUM ION, DNA/RNA (5'-D(*C)-R(P*G)-D(P*C)-R(P*G)-D(P*C)-R(P*G)-3')
著者Gilski, M, Drozdzal, P, Kierzek, R, Jaskolski, M.
登録日2015-10-19
公開日2016-02-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Atomic resolution structure of a chimeric DNA-RNA Z-type duplex in complex with Ba(2+) ions: a case of complicated multi-domain twinning.
Acta Crystallogr D Struct Biol, 72, 2016
8G46
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BU of 8g46 by Molmil
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
分子名称: Bromodomain-containing protein 4, DDB1- and CUL4-associated factor 16, DET1- and DDB1-associated protein 1, ...
著者Ma, M.W, Hunkeler, M, Jin, C.Y, Fischer, E.S.
登録日2023-02-08
公開日2023-03-08
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Template-assisted covalent modification of DCAF16 underlies activity of BRD4 molecular glue degraders.
Biorxiv, 2023
4HIG
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BU of 4hig by Molmil
Ultrahigh-resolution crystal structure of Z-DNA in complex with Mn2+ ion.
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MANGANESE (II) ION, SPERMINE (FULLY PROTONATED FORM)
著者Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M.
登録日2012-10-11
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.75 Å)
主引用文献Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions.
Acta Crystallogr.,Sect.D, 69, 2013
4HIF
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BU of 4hif by Molmil
Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE (FULLY PROTONATED FORM), ...
著者Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M.
登録日2012-10-11
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions.
Acta Crystallogr.,Sect.D, 69, 2013

 

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